Wall clock time and date at job start Mon Mar 30 2020 03:27:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 F 1.39904 * 109.46795 * 2 1 4 4 F 1.39894 * 109.47429 * 240.00440 * 2 1 3 5 5 C 1.52999 * 109.46989 * 119.99771 * 2 1 3 6 6 N 1.46905 * 109.47144 * 185.84262 * 5 2 1 7 7 C 1.46893 * 111.00426 * 76.32522 * 6 5 2 8 8 C 1.53237 * 109.34457 * 172.74846 * 7 6 5 9 9 N 1.47082 * 108.51869 * 53.82908 * 8 7 6 10 10 C 1.36936 * 120.87828 * 128.79827 * 9 8 7 11 11 H 1.08000 * 120.00179 * 206.98613 * 10 9 8 12 12 C 1.38819 * 120.00208 * 26.98422 * 10 9 8 13 13 N 1.31613 * 119.99682 * 18.13155 * 12 10 9 14 14 Si 1.86797 * 119.99849 * 198.13364 * 12 10 9 15 15 H 1.48504 * 109.47075 * 60.00010 * 14 12 10 16 16 H 1.48500 * 109.47048 * 179.97438 * 14 12 10 17 17 H 1.48497 * 109.47466 * 299.99926 * 14 12 10 18 18 C 1.47073 * 118.24005 * 308.81671 * 9 8 7 19 19 C 1.46905 * 110.99829 * 312.02381 * 6 5 2 20 20 H 1.08997 * 109.47710 * 300.00319 * 1 2 3 21 21 H 1.09003 * 109.46691 * 60.00480 * 1 2 3 22 22 H 1.09002 * 109.46898 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.46915 * 65.84202 * 5 2 1 24 24 H 1.08998 * 109.47299 * 305.83628 * 5 2 1 25 25 H 1.09001 * 109.49464 * 52.78637 * 7 6 5 26 26 H 1.09009 * 109.49686 * 292.71089 * 7 6 5 27 27 H 1.08996 * 109.63221 * 173.53848 * 8 7 6 28 28 H 1.09001 * 109.62704 * 293.92591 * 8 7 6 29 29 H 0.97005 * 119.99720 * 180.02562 * 13 12 10 30 30 H 1.09005 * 109.62988 * 170.89323 * 18 9 8 31 31 H 1.08998 * 109.63281 * 291.48037 * 18 9 8 32 32 H 1.09005 * 109.48891 * 67.29336 * 19 6 5 33 33 H 1.08995 * 109.51737 * 307.23340 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3191 0.0000 4 9 1.9964 -0.6594 -1.1423 5 6 2.0400 -0.7212 1.2493 6 7 3.5022 -0.6003 1.3219 7 6 3.8979 0.7399 1.7747 8 6 5.4117 0.7696 2.0105 9 7 6.0841 0.3022 0.7887 10 6 7.0915 1.0330 0.2176 11 1 7.2814 0.9546 -0.8427 12 6 7.8688 1.8748 1.0014 13 7 7.8943 1.7197 2.3081 14 14 8.8785 3.2275 0.2014 15 1 7.9759 4.1515 -0.5312 16 1 9.6139 3.9813 1.2484 17 1 9.8480 2.6256 -0.7489 18 6 5.6456 -0.9706 0.1965 19 6 4.1225 -0.9317 0.0321 20 1 -0.3634 0.5138 0.8899 21 1 -0.3633 0.5138 -0.8901 22 1 -0.3633 -1.0277 -0.0005 23 1 1.7645 -1.7746 1.1985 24 1 1.5938 -0.2712 2.1362 25 1 3.3803 0.9774 2.7041 26 1 3.6340 1.4739 1.0131 27 1 5.7274 1.7884 2.2353 28 1 5.6652 0.1153 2.8446 29 1 8.4372 2.3081 2.8558 30 1 6.1158 -1.1023 -0.7780 31 1 5.9219 -1.7948 0.8540 32 1 3.8554 -0.1746 -0.7051 33 1 3.7678 -1.9064 -0.3028 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000707504208.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:27:52 Heat of formation + Delta-G solvation = -62.595268 kcal Electronic energy + Delta-G solvation = -17918.245508 eV Core-core repulsion = 14843.847915 eV Total energy + Delta-G solvation = -3074.397592 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 234.124 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.94959 -46.83920 -37.95496 -34.61468 -32.30847 -30.90001 -29.84354 -27.41918 -24.76887 -22.77090 -22.43213 -21.44840 -19.22268 -17.51270 -16.95371 -16.44315 -15.95015 -14.90257 -14.43206 -14.27385 -14.01364 -13.54539 -13.19792 -13.16156 -13.09322 -12.74427 -12.68743 -12.52764 -11.92364 -11.66282 -11.35330 -11.22208 -11.02954 -10.66452 -10.44129 -10.13257 -9.99382 -9.69022 -9.54706 -8.44839 -7.76052 -6.59415 -5.72751 -3.12879 3.42881 3.48055 3.50229 3.86913 4.10212 4.37811 4.44573 4.55519 4.71673 5.15283 5.32298 5.44148 5.50631 5.61913 5.66579 5.74328 5.96511 6.02944 6.25350 6.33571 6.50117 6.58609 6.75104 6.97850 7.27899 7.51373 7.66356 7.72167 7.86424 8.49475 9.27067 9.90815 10.49935 11.36310 Molecular weight = 234.12amu Principal moments of inertia in cm(-1) A = 0.041830 B = 0.007445 C = 0.007311 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 669.222764 B = 3760.184007 C = 3828.880978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C 0.248 3.752 3 F -0.194 7.194 4 F -0.199 7.199 5 C 0.018 3.982 6 N -0.524 5.524 7 C 0.016 3.984 8 C 0.180 3.820 9 N -0.594 5.594 10 C -0.251 4.251 11 H 0.065 0.935 12 C 0.002 3.998 13 N -0.903 5.903 14 Si 0.902 3.098 15 H -0.285 1.285 16 H -0.290 1.290 17 H -0.283 1.283 18 C 0.148 3.852 19 C 0.033 3.967 20 H 0.086 0.914 21 H 0.076 0.924 22 H 0.087 0.913 23 H 0.097 0.903 24 H 0.097 0.903 25 H 0.059 0.941 26 H 0.051 0.949 27 H 0.086 0.914 28 H 0.025 0.975 29 H 0.254 0.746 30 H 0.056 0.944 31 H 0.024 0.976 32 H 0.044 0.956 33 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.772 -4.057 -2.218 15.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.251 4.251 2 C 0.210 3.790 3 F -0.175 7.175 4 F -0.180 7.180 5 C -0.113 4.113 6 N -0.246 5.246 7 C -0.112 4.112 8 C 0.054 3.946 9 N -0.317 5.317 10 C -0.381 4.381 11 H 0.083 0.917 12 C -0.197 4.197 13 N -0.548 5.548 14 Si 0.731 3.269 15 H -0.211 1.211 16 H -0.216 1.216 17 H -0.209 1.209 18 C 0.021 3.979 19 C -0.096 4.096 20 H 0.105 0.895 21 H 0.095 0.905 22 H 0.106 0.894 23 H 0.116 0.884 24 H 0.115 0.885 25 H 0.077 0.923 26 H 0.069 0.931 27 H 0.104 0.896 28 H 0.043 0.957 29 H 0.064 0.936 30 H 0.074 0.926 31 H 0.042 0.958 32 H 0.063 0.937 33 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -14.418 -4.279 -1.769 15.143 hybrid contribution 0.237 1.349 -1.048 1.725 sum -14.181 -2.931 -2.817 14.752 Atomic orbital electron populations 1.22762 0.92356 1.05011 1.04972 1.22255 0.93684 0.76726 0.86371 1.92977 1.90093 1.37642 1.96837 1.92984 1.90157 1.80914 1.53917 1.23409 0.91721 1.01459 0.94666 1.62144 1.03506 1.29595 1.29396 1.23260 1.01127 0.87907 0.98943 1.20815 0.84996 1.00656 0.88165 1.44087 1.39199 1.19397 1.29059 1.19154 1.07965 1.19395 0.91594 0.91747 1.25007 0.97778 1.01374 0.95529 1.70039 1.42446 1.38633 1.03679 0.86380 0.79830 0.82347 0.78305 1.21114 1.21622 1.20892 1.21006 0.90385 0.89453 0.97011 1.22986 0.97994 0.99612 0.89033 0.89465 0.90503 0.89449 0.88431 0.88514 0.92284 0.93075 0.89577 0.95728 0.93629 0.92580 0.95827 0.93740 0.91722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.79 9.38 37.16 0.35 -1.44 16 2 C 0.25 3.43 1.78 -26.73 -0.05 3.38 16 3 F -0.19 -3.33 13.67 2.25 0.03 -3.30 16 4 F -0.20 -3.12 13.64 2.25 0.03 -3.09 16 5 C 0.02 0.24 5.27 -3.82 -0.02 0.22 16 6 N -0.52 -9.68 4.83 -234.32 -1.13 -10.81 16 7 C 0.02 0.33 5.14 -3.71 -0.02 0.31 16 8 C 0.18 4.53 5.42 -3.60 -0.02 4.51 16 9 N -0.59 -15.82 3.03 -172.02 -0.52 -16.34 16 10 C -0.25 -7.22 9.62 -15.06 -0.14 -7.36 16 11 H 0.06 1.82 7.89 -52.49 -0.41 1.40 16 12 C 0.00 0.04 4.90 -17.43 -0.09 -0.04 16 13 N -0.90 -26.95 11.26 55.49 0.62 -26.33 16 14 Si 0.90 22.32 29.59 -169.99 -5.03 17.29 16 15 H -0.28 -7.01 7.11 56.52 0.40 -6.61 16 16 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 17 H -0.28 -6.89 7.11 56.52 0.40 -6.49 16 18 C 0.15 3.36 6.69 -3.61 -0.02 3.34 16 19 C 0.03 0.64 4.09 -3.70 -0.02 0.62 16 20 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 21 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 22 H 0.09 0.64 8.14 -51.93 -0.42 0.22 16 23 H 0.10 1.13 8.14 -51.93 -0.42 0.71 16 24 H 0.10 1.14 7.84 -51.93 -0.41 0.73 16 25 H 0.06 1.08 7.92 -51.93 -0.41 0.67 16 26 H 0.05 1.12 5.63 -51.92 -0.29 0.82 16 27 H 0.09 2.38 6.19 -51.93 -0.32 2.06 16 28 H 0.02 0.66 8.14 -51.93 -0.42 0.24 16 29 H 0.25 7.30 8.31 -40.82 -0.34 6.96 16 30 H 0.06 1.23 7.95 -51.93 -0.41 0.82 16 31 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.04 0.94 5.84 -51.93 -0.30 0.63 16 33 H 0.06 1.12 7.73 -51.93 -0.40 0.71 16 LS Contribution 263.81 15.07 3.98 3.98 Total: -1.00 -31.62 263.81 -6.68 -38.30 By element: Atomic # 1 Polarization: 1.39 SS G_CDS: -4.64 Total: -3.24 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: -0.03 Total: 3.54 kcal Atomic # 7 Polarization: -52.45 SS G_CDS: -1.03 Total: -53.48 kcal Atomic # 9 Polarization: -6.45 SS G_CDS: 0.06 Total: -6.39 kcal Atomic # 14 Polarization: 22.32 SS G_CDS: -5.03 Total: 17.29 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -31.62 -6.68 -38.30 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000707504208.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.295 kcal (2) G-P(sol) polarization free energy of solvation -31.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.685 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds