Wall clock time and date at job start Mon Mar 30 2020 03:13:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30282 * 125.90309 * 2 1 4 4 N 1.39891 * 109.25667 * 179.80662 * 3 2 1 5 5 C 1.46498 * 125.75018 * 180.29492 * 4 3 2 6 6 C 1.34875 * 108.51067 * 0.38900 * 4 3 2 7 7 N 1.37983 * 126.45526 * 179.88082 * 6 4 3 8 8 C 1.39389 * 107.08901 * 359.62240 * 6 4 3 9 9 C 1.46700 * 126.52375 * 180.25388 * 8 6 4 10 10 O 1.21717 * 119.99264 * 90.00749 * 9 8 6 11 11 N 1.34775 * 120.00488 * 269.99969 * 9 8 6 12 12 C 1.46497 * 119.99606 * 0.02562 * 11 9 8 13 13 C 1.37011 * 119.99820 * 179.97438 * 11 9 8 14 14 H 1.07997 * 120.00142 * 22.47242 * 13 11 9 15 15 C 1.38943 * 119.99722 * 202.45834 * 13 11 9 16 16 N 1.31441 * 120.00099 * 11.59231 * 15 13 11 17 17 Si 1.86803 * 119.99950 * 191.58125 * 15 13 11 18 18 H 1.48500 * 109.46793 * 60.00987 * 17 15 13 19 19 H 1.48504 * 109.47031 * 180.02562 * 17 15 13 20 20 H 1.48496 * 109.47133 * 300.00831 * 17 15 13 21 21 H 1.09000 * 109.46880 * 269.95233 * 1 2 3 22 22 H 1.08996 * 109.47272 * 29.95465 * 1 2 3 23 23 H 1.09004 * 109.46757 * 149.95982 * 1 2 3 24 24 H 1.08998 * 109.47068 * 270.11477 * 5 4 3 25 25 H 1.09007 * 109.46871 * 30.11420 * 5 4 3 26 26 H 1.08994 * 109.47714 * 150.11074 * 5 4 3 27 27 H 0.96999 * 120.00299 * 179.68846 * 7 6 4 28 28 H 0.97007 * 119.99928 * 359.41974 * 7 6 4 29 29 H 1.09001 * 109.47045 * 92.19521 * 12 11 9 30 30 H 1.09001 * 109.46739 * 212.18598 * 12 11 9 31 31 H 1.08998 * 109.47624 * 332.18656 * 12 11 9 32 32 H 0.96993 * 120.00300 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2710 1.0553 0.0000 4 7 3.6112 0.6546 0.0045 5 6 4.7719 1.5485 0.0120 6 6 3.6552 -0.6935 -0.0014 7 7 4.7911 -1.4768 -0.0020 8 6 2.3368 -1.1462 -0.0009 9 6 1.8940 -2.5448 -0.0008 10 8 1.7107 -3.1250 1.0534 11 7 1.6900 -3.1872 -1.1679 12 6 1.9111 -2.4889 -2.4367 13 6 1.2770 -4.4936 -1.1677 14 1 0.7739 -4.9007 -0.3032 15 6 1.5050 -5.2944 -2.2800 16 7 2.3084 -4.8803 -3.2344 17 14 0.6702 -6.9597 -2.4189 18 1 -0.8035 -6.7773 -2.4044 19 1 1.0761 -7.6125 -3.6895 20 1 1.0747 -7.8133 -1.2731 21 1 -0.3633 -0.0009 1.0277 22 1 -0.3633 0.8903 -0.5131 23 1 -0.3633 -0.8897 -0.5145 24 1 5.0628 1.7748 -1.0138 25 1 4.5150 2.4730 0.5293 26 1 5.6012 1.0629 0.5261 27 1 4.7135 -2.4437 -0.0019 28 1 5.6673 -1.0605 -0.0064 29 1 2.9345 -2.6586 -2.7713 30 1 1.2163 -2.8683 -3.1860 31 1 1.7469 -1.4205 -2.2969 32 1 2.4679 -5.4395 -4.0107 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000308818181.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:13:06 Heat of formation + Delta-G solvation = 53.251988 kcal Electronic energy + Delta-G solvation = -17379.313142 eV Core-core repulsion = 14570.172198 eV Total energy + Delta-G solvation = -2809.140944 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.117 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.75368 -37.79797 -34.71601 -34.42603 -32.99099 -31.38396 -29.27755 -28.15685 -26.15985 -25.44594 -24.08399 -21.27401 -19.66061 -18.78444 -16.97107 -16.67651 -16.15579 -15.63852 -15.21584 -14.64843 -14.15749 -13.85306 -13.34585 -13.12032 -12.92000 -12.42401 -12.17501 -12.08521 -11.87449 -11.41712 -11.24472 -11.08256 -10.75604 -10.53758 -10.35375 -10.21123 -10.05817 -8.93894 -8.42536 -8.22392 -7.54654 -7.11389 -6.22315 -3.77949 2.48253 2.67794 3.23550 3.23789 3.28756 3.34420 3.97449 4.05096 4.23576 4.72653 5.17003 5.21336 5.22834 5.38900 5.43844 5.61156 6.05860 6.08934 6.22964 6.39787 6.42206 6.62913 6.81325 7.04791 7.22330 7.36880 7.64462 7.70988 7.86907 8.27460 8.35693 8.63238 9.31082 9.57457 10.19364 10.81064 Molecular weight = 238.12amu Principal moments of inertia in cm(-1) A = 0.035227 B = 0.007574 C = 0.007075 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 794.660834 B = 3695.787607 C = 3956.517899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.132 3.868 3 N -0.324 5.324 4 N -0.404 5.404 5 C 0.109 3.891 6 C 0.390 3.610 7 N -0.843 5.843 8 C -0.315 4.315 9 C 0.528 3.472 10 O -0.592 6.592 11 N -0.439 5.439 12 C 0.124 3.876 13 C -0.304 4.304 14 H 0.098 0.902 15 C 0.029 3.971 16 N -0.885 5.885 17 Si 0.925 3.075 18 H -0.274 1.274 19 H -0.286 1.286 20 H -0.274 1.274 21 H 0.076 0.924 22 H 0.069 0.931 23 H 0.079 0.921 24 H 0.067 0.933 25 H 0.087 0.913 26 H 0.075 0.925 27 H 0.423 0.577 28 H 0.395 0.605 29 H 0.050 0.950 30 H 0.063 0.937 31 H 0.027 0.973 32 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.618 9.719 1.098 10.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.035 4.035 3 N -0.147 5.147 4 N -0.193 5.193 5 C -0.033 4.033 6 C 0.160 3.840 7 N -0.392 5.392 8 C -0.335 4.335 9 C 0.316 3.684 10 O -0.477 6.477 11 N -0.157 5.157 12 C -0.020 4.020 13 C -0.432 4.432 14 H 0.115 0.885 15 C -0.173 4.173 16 N -0.524 5.524 17 Si 0.752 3.248 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.199 1.199 21 H 0.095 0.905 22 H 0.088 0.912 23 H 0.098 0.902 24 H 0.086 0.914 25 H 0.106 0.894 26 H 0.093 0.907 27 H 0.255 0.745 28 H 0.223 0.777 29 H 0.069 0.931 30 H 0.082 0.918 31 H 0.045 0.955 32 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 4.668 10.718 1.396 11.773 hybrid contribution 0.342 -1.817 -0.383 1.888 sum 5.011 8.901 1.012 10.264 Atomic orbital electron populations 1.20173 0.86830 1.03074 1.02939 1.22023 0.96329 0.89287 0.95874 1.76905 0.84614 1.21704 1.31475 1.47854 1.05956 1.02105 1.63387 1.21627 0.84673 0.94354 1.02662 1.17980 0.88570 0.82438 0.94984 1.41307 1.03695 1.09158 1.85009 1.19464 0.89551 0.95467 1.29013 1.16885 0.83095 0.84428 0.84036 1.90601 1.56970 1.68665 1.31455 1.43543 1.57203 1.10857 1.04075 1.21331 1.01869 0.92241 0.86601 1.19624 1.34670 0.86093 1.02815 0.88475 1.25319 0.96279 0.99452 0.96278 1.70027 1.34126 1.38291 1.09996 0.86019 0.79621 0.81744 0.77412 1.19951 1.21105 1.19897 0.90527 0.91168 0.90200 0.91398 0.89424 0.90667 0.74464 0.77735 0.93149 0.91828 0.95475 0.92432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.21 10.28 36.00 0.37 -0.84 16 2 C 0.13 2.63 6.95 -82.00 -0.57 2.06 16 3 N -0.32 -6.08 12.47 33.91 0.42 -5.65 16 4 N -0.40 -6.70 4.00 -66.80 -0.27 -6.97 16 5 C 0.11 1.15 11.24 59.85 0.67 1.83 16 6 C 0.39 7.25 8.01 -153.75 -1.23 6.01 16 7 N -0.84 -12.87 9.04 31.42 0.28 -12.59 16 8 C -0.32 -6.93 4.09 -104.81 -0.43 -7.35 16 9 C 0.53 13.68 6.92 -12.84 -0.09 13.60 16 10 O -0.59 -17.41 16.80 5.17 0.09 -17.32 16 11 N -0.44 -11.59 3.02 -123.67 -0.37 -11.96 16 12 C 0.12 2.96 8.54 59.85 0.51 3.47 16 13 C -0.30 -8.58 9.29 -14.98 -0.14 -8.72 16 14 H 0.10 2.86 7.40 -52.49 -0.39 2.47 16 15 C 0.03 0.78 5.11 -17.46 -0.09 0.69 16 16 N -0.88 -23.74 10.61 55.50 0.59 -23.15 16 17 Si 0.93 20.93 29.57 -169.99 -5.03 15.90 16 18 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 19 H -0.29 -6.32 7.11 56.52 0.40 -5.92 16 20 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 21 H 0.08 1.21 8.14 -51.93 -0.42 0.78 16 22 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 23 H 0.08 1.43 8.01 -51.93 -0.42 1.02 16 24 H 0.07 0.63 8.14 -51.93 -0.42 0.20 16 25 H 0.09 0.83 8.14 -51.92 -0.42 0.41 16 26 H 0.07 0.61 7.47 -51.93 -0.39 0.22 16 27 H 0.42 7.15 8.71 -40.82 -0.36 6.80 16 28 H 0.39 4.32 8.05 -40.82 -0.33 3.99 16 29 H 0.05 1.25 7.54 -51.93 -0.39 0.85 16 30 H 0.06 1.58 7.06 -51.93 -0.37 1.21 16 31 H 0.03 0.59 6.56 -51.93 -0.34 0.25 16 32 H 0.27 6.78 8.31 -40.82 -0.34 6.45 16 LS Contribution 278.91 15.07 4.20 4.20 Total: -1.00 -34.13 278.91 -4.88 -39.01 By element: Atomic # 1 Polarization: 11.58 SS G_CDS: -3.80 Total: 7.78 kcal Atomic # 6 Polarization: 11.74 SS G_CDS: -0.99 Total: 10.75 kcal Atomic # 7 Polarization: -60.98 SS G_CDS: 0.66 Total: -60.32 kcal Atomic # 8 Polarization: -17.41 SS G_CDS: 0.09 Total: -17.32 kcal Atomic # 14 Polarization: 20.93 SS G_CDS: -5.03 Total: 15.90 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -34.13 -4.88 -39.01 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000308818181.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.262 kcal (2) G-P(sol) polarization free energy of solvation -34.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.875 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.010 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds