Wall clock time and date at job start Mon Mar 30 2020 04:22:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38654 * 120.41103 * 2 1 4 4 C 1.38732 * 118.40849 * 180.02562 * 3 2 1 5 5 Cl 1.73596 * 120.43229 * 180.02562 * 4 3 2 6 6 C 1.38348 * 119.13741 * 359.97438 * 4 3 2 7 7 N 1.31851 * 120.74381 * 0.28177 * 6 4 3 8 8 C 1.31879 * 121.73643 * 359.42870 * 7 6 4 9 9 C 1.50702 * 119.60585 * 180.31376 * 8 7 6 10 10 H 1.08994 * 109.47341 * 187.55301 * 9 8 7 11 11 C 1.50702 * 109.46738 * 67.55532 * 9 8 7 12 12 H 1.07999 * 119.99872 * 305.04329 * 11 9 8 13 13 C 1.37870 * 119.99749 * 125.04858 * 11 9 8 14 14 N 1.31517 * 120.00749 * 5.76032 * 13 11 9 15 15 Si 1.86803 * 119.99982 * 185.76016 * 13 11 9 16 16 H 1.48500 * 109.46894 * 0.02562 * 15 13 11 17 17 H 1.48503 * 109.47463 * 119.99946 * 15 13 11 18 18 H 1.48498 * 109.47254 * 239.99870 * 15 13 11 19 19 C 1.52999 * 109.47021 * 307.55710 * 9 8 7 20 20 N 1.46895 * 109.47203 * 184.75683 * 19 9 8 21 21 H 1.08997 * 109.47571 * 96.05500 * 1 2 3 22 22 H 1.09001 * 109.47061 * 216.06065 * 1 2 3 23 23 H 1.09010 * 109.46922 * 336.05858 * 1 2 3 24 24 H 1.08001 * 120.79604 * 0.04162 * 3 2 1 25 25 H 1.07997 * 119.63015 * 179.97438 * 6 4 3 26 26 H 0.96997 * 120.00635 * 180.02562 * 14 13 11 27 27 H 1.09004 * 109.47055 * 304.75258 * 19 9 8 28 28 H 1.08994 * 109.47186 * 64.75143 * 19 9 8 29 29 H 1.00898 * 111.00293 * 56.04446 * 20 19 9 30 30 H 1.00893 * 111.00414 * 179.97438 * 20 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2089 1.1958 0.0000 4 6 3.5953 1.1473 -0.0005 5 17 4.5264 2.6125 0.0001 6 6 4.2263 -0.0839 -0.0005 7 7 3.5253 -1.2006 -0.0056 8 6 2.2065 -1.1918 0.0004 9 6 1.4533 -2.4970 0.0014 10 1 0.3888 -2.3023 -0.1285 11 6 1.6780 -3.2056 1.3123 12 1 2.6832 -3.4086 1.6510 13 6 0.6003 -3.5948 2.0791 14 7 -0.6223 -3.4506 1.6165 15 14 0.8767 -4.3270 3.7753 16 1 2.3332 -4.3809 4.0598 17 1 0.2047 -3.4818 4.7948 18 1 0.3119 -5.6996 3.8200 19 6 1.9548 -3.3761 -1.1461 20 7 1.1445 -4.5994 -1.2160 21 1 -0.3634 -0.1084 -1.0219 22 1 -0.3633 -0.8308 0.6049 23 1 -0.3633 0.9393 0.4171 24 1 1.6887 2.1423 0.0007 25 1 5.3053 -0.1309 -0.0014 26 1 -1.3805 -3.7240 2.1562 27 1 1.8703 -2.8302 -2.0857 28 1 2.9977 -3.6405 -0.9721 29 1 0.1646 -4.3790 -1.3124 30 1 1.4559 -5.1970 -1.9668 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260847646.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:22:01 Heat of formation + Delta-G solvation = 16.308467 kcal Electronic energy + Delta-G solvation = -15055.106449 eV Core-core repulsion = 12489.635354 eV Total energy + Delta-G solvation = -2565.471094 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.072 amu Computer time = 5.22 seconds Orbital eigenvalues (eV) -39.83197 -36.41322 -35.04997 -33.10563 -32.10190 -31.25544 -28.04099 -26.51592 -24.24562 -22.90442 -21.47644 -19.83621 -16.79825 -16.40486 -15.78177 -15.13070 -14.54636 -13.99601 -13.96211 -13.38099 -12.88864 -12.62637 -12.44290 -12.17890 -12.04902 -11.72278 -11.53860 -11.17635 -10.93624 -10.70106 -10.53886 -10.39435 -9.58339 -9.11216 -9.06388 -8.76128 -8.43314 -7.96320 -7.46411 -6.03340 -3.98301 1.56739 1.72004 2.38301 3.33091 3.41397 3.47488 4.27884 4.50061 4.98510 5.15920 5.21530 5.42205 5.46255 5.69725 5.85211 6.02084 6.18358 6.26257 6.37535 6.40243 6.53384 6.80526 6.86164 7.07806 7.29359 7.61515 7.94125 8.17563 8.41153 8.52026 8.68250 9.05927 9.61349 11.06490 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.026499 B = 0.007517 C = 0.007057 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1056.385881 B = 3723.964365 C = 3966.961156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.130 4.130 3 C -0.075 4.075 4 C -0.116 4.116 5 Cl -0.085 7.085 6 C 0.104 3.896 7 N -0.463 5.463 8 C 0.182 3.818 9 C 0.065 3.935 10 H 0.092 0.908 11 C -0.473 4.473 12 H 0.057 0.943 13 C 0.073 3.927 14 N -0.890 5.890 15 Si 0.892 3.108 16 H -0.274 1.274 17 H -0.287 1.287 18 H -0.284 1.284 19 C 0.087 3.913 20 N -0.824 5.824 21 H 0.064 0.936 22 H 0.104 0.896 23 H 0.055 0.945 24 H 0.132 0.868 25 H 0.151 0.849 26 H 0.260 0.740 27 H -0.018 1.018 28 H 0.061 0.939 29 H 0.337 0.663 30 H 0.315 0.685 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.098 7.991 -4.861 9.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.133 4.133 3 C -0.101 4.101 4 C -0.145 4.145 5 Cl -0.057 7.057 6 C -0.054 4.054 7 N -0.172 5.172 8 C 0.045 3.955 9 C 0.045 3.955 10 H 0.110 0.890 11 C -0.511 4.511 12 H 0.076 0.924 13 C -0.129 4.129 14 N -0.528 5.528 15 Si 0.720 3.280 16 H -0.199 1.199 17 H -0.213 1.213 18 H -0.210 1.210 19 C -0.044 4.044 20 N -0.352 5.352 21 H 0.083 0.917 22 H 0.122 0.878 23 H 0.074 0.926 24 H 0.150 0.850 25 H 0.168 0.832 26 H 0.070 0.930 27 H 0.000 1.000 28 H 0.080 0.920 29 H 0.150 0.850 30 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 3.709 7.132 -4.071 9.010 hybrid contribution -0.363 1.077 0.088 1.140 sum 3.346 8.208 -3.983 9.718 Atomic orbital electron populations 1.20848 0.89808 1.03749 1.02645 1.20840 0.98085 0.92479 1.01850 1.21291 0.91758 0.98809 0.98216 1.21905 0.92762 0.88030 1.11807 1.98317 1.73549 1.36430 1.97382 1.22728 1.00327 0.86201 0.96191 1.67811 1.08850 1.28129 1.12370 1.22510 0.88861 0.97094 0.87082 1.18336 0.96445 0.85447 0.95252 0.88986 1.20752 0.92899 1.35031 1.02390 0.92434 1.24842 0.95225 0.95012 0.97797 1.69828 0.97827 1.48302 1.36872 0.86540 0.78335 0.78788 0.84317 1.19863 1.21341 1.20998 1.21795 0.97664 0.90279 0.94699 1.58386 1.07047 1.18592 1.51164 0.91688 0.87777 0.92618 0.85013 0.83164 0.93034 0.99992 0.92037 0.85000 0.87479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.97 9.13 36.01 0.33 -1.64 16 2 C -0.13 -2.49 5.90 -104.49 -0.62 -3.10 16 3 C -0.07 -1.26 9.64 -39.25 -0.38 -1.63 16 4 C -0.12 -1.92 6.34 -39.36 -0.25 -2.17 16 5 Cl -0.09 -1.18 28.99 -51.86 -1.50 -2.69 16 6 C 0.10 1.86 10.99 -17.50 -0.19 1.67 16 7 N -0.46 -9.80 9.86 -9.44 -0.09 -9.90 16 8 C 0.18 3.96 5.46 -82.59 -0.45 3.51 16 9 C 0.06 1.52 2.19 -92.92 -0.20 1.31 16 10 H 0.09 2.23 4.58 -51.93 -0.24 1.99 16 11 C -0.47 -12.56 7.99 -34.44 -0.28 -12.84 16 12 H 0.06 1.62 7.82 -52.49 -0.41 1.21 16 13 C 0.07 1.94 5.45 -17.82 -0.10 1.84 16 14 N -0.89 -23.55 12.64 55.43 0.70 -22.85 16 15 Si 0.89 21.35 29.54 -169.99 -5.02 16.33 16 16 H -0.27 -6.65 7.11 56.52 0.40 -6.24 16 17 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 18 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 19 C 0.09 1.89 5.94 -3.83 -0.02 1.87 16 20 N -0.82 -17.00 9.33 -10.37 -0.10 -17.09 16 21 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 22 H 0.10 2.15 6.61 -51.93 -0.34 1.80 16 23 H 0.05 0.82 8.06 -51.92 -0.42 0.41 16 24 H 0.13 1.86 8.06 -52.49 -0.42 1.44 16 25 H 0.15 2.27 8.06 -52.49 -0.42 1.85 16 26 H 0.26 6.66 8.31 -40.82 -0.34 6.32 16 27 H -0.02 -0.37 8.14 -51.93 -0.42 -0.79 16 28 H 0.06 1.40 8.04 -51.93 -0.42 0.99 16 29 H 0.34 6.92 8.99 -39.29 -0.35 6.57 16 30 H 0.32 5.46 9.08 -39.30 -0.36 5.10 16 LS Contribution 274.60 15.07 4.14 4.14 Total: -1.00 -27.43 274.60 -7.40 -34.82 By element: Atomic # 1 Polarization: 11.79 SS G_CDS: -3.36 Total: 8.43 kcal Atomic # 6 Polarization: -9.03 SS G_CDS: -2.16 Total: -11.19 kcal Atomic # 7 Polarization: -50.35 SS G_CDS: 0.51 Total: -49.84 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.33 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -27.43 -7.40 -34.82 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260847646.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.132 kcal (2) G-P(sol) polarization free energy of solvation -27.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.397 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.823 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 5.22 seconds