Wall clock time and date at job start Mon Mar 30 2020 03:29:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.36034 * 117.00045 * 2 1 4 4 C 1.38539 * 120.04943 * 359.97438 * 3 2 1 5 5 C 1.38243 * 120.02434 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.94114 * 179.97438 * 5 4 3 7 7 H 1.08994 * 109.47551 * 219.99840 * 6 5 4 8 8 N 1.46900 * 109.47395 * 340.00302 * 6 5 4 9 9 C 1.50702 * 109.46869 * 99.99894 * 6 5 4 10 10 H 1.08002 * 120.00299 * 0.02562 * 9 6 5 11 11 C 1.37884 * 119.99942 * 179.72213 * 9 6 5 12 12 N 1.31514 * 119.99698 * 0.28408 * 11 9 6 13 13 Si 1.86794 * 119.99837 * 180.27476 * 11 9 6 14 14 H 1.48496 * 109.47341 * 0.02562 * 13 11 9 15 15 H 1.48508 * 109.46983 * 120.00379 * 13 11 9 16 16 H 1.48503 * 109.47491 * 240.00192 * 13 11 9 17 17 C 1.38454 * 120.12103 * 0.25494 * 5 4 3 18 18 F 1.35096 * 119.95298 * 179.74568 * 17 5 4 19 19 C 1.38422 * 120.09573 * 359.48936 * 17 5 4 20 20 C 1.38569 * 119.97151 * 0.51212 * 19 17 5 21 21 O 1.35996 * 120.05921 * 179.76632 * 20 19 17 22 22 H 1.08996 * 109.46799 * 180.02562 * 1 2 3 23 23 H 1.08998 * 109.47015 * 300.00060 * 1 2 3 24 24 H 1.08996 * 109.46613 * 60.00127 * 1 2 3 25 25 H 1.07998 * 119.98689 * 0.02562 * 4 3 2 26 26 H 1.00907 * 110.99792 * 296.04461 * 8 6 5 27 27 H 1.00903 * 111.00086 * 59.99217 * 8 6 5 28 28 H 0.97005 * 119.99651 * 179.97438 * 12 11 9 29 29 H 1.07998 * 120.01886 * 180.25261 * 19 17 5 30 30 H 0.96700 * 113.99938 * 269.97772 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0467 1.2121 0.0000 4 6 1.2931 2.3746 -0.0005 5 6 1.9213 3.6061 0.0000 6 6 1.0998 4.8695 -0.0012 7 1 1.5624 5.6032 -0.6612 8 7 -0.2577 4.5705 -0.4763 9 6 1.0312 5.4253 1.3979 10 1 1.5326 4.9150 2.2070 11 6 0.3334 6.5888 1.6441 12 7 -0.2770 7.2104 0.6589 13 14 0.2548 7.2818 3.3769 14 1 1.0185 6.4016 4.2973 15 1 0.8450 8.6444 3.3923 16 1 -1.1613 7.3508 3.8188 17 6 3.3038 3.6809 -0.0043 18 9 3.9141 4.8861 -0.0089 19 6 4.0616 2.5225 0.0016 20 6 3.4361 1.2861 0.0010 21 8 4.1789 0.1469 0.0020 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3632 0.5138 -0.8900 25 1 0.2146 2.3188 -0.0005 26 1 -0.2443 4.2570 -1.4354 27 1 -0.7082 3.8922 0.1195 28 1 -0.7682 8.0287 0.8321 29 1 5.1399 2.5823 0.0024 30 1 4.3944 -0.1829 -0.8811 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238416070.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:29:07 Heat of formation + Delta-G solvation = -93.248947 kcal Electronic energy + Delta-G solvation = -17388.659674 eV Core-core repulsion = 14292.382776 eV Total energy + Delta-G solvation = -3096.276898 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.10986 -40.10455 -37.57610 -36.74452 -34.03948 -31.64378 -29.50817 -28.83837 -27.31412 -25.79161 -23.14411 -21.86847 -20.47795 -18.53276 -17.22875 -16.80238 -16.51234 -16.15519 -15.49491 -14.78391 -14.68321 -14.45683 -14.20305 -13.90739 -13.65284 -13.43744 -12.80958 -12.32888 -11.91252 -11.69273 -11.25718 -11.13170 -10.85090 -10.76673 -10.54364 -10.43421 -9.83111 -9.34326 -8.51513 -8.38512 -7.55329 -7.26666 -5.93219 -4.08619 1.46361 1.59360 3.31126 3.37042 3.39224 3.43779 3.84050 4.27168 4.46441 4.98003 5.03724 5.16004 5.24729 5.29400 5.46688 5.51146 5.61628 5.84243 5.98914 6.14527 6.41639 6.56420 6.65834 7.08585 7.30319 7.38515 7.84570 7.88533 8.08140 8.49054 8.86007 9.04243 9.60065 11.11169 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.026709 B = 0.007880 C = 0.006968 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1048.076880 B = 3552.321774 C = 4017.332885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.312 6.312 3 C 0.092 3.908 4 C -0.180 4.180 5 C -0.072 4.072 6 C 0.255 3.745 7 H 0.058 0.942 8 N -0.807 5.807 9 C -0.529 4.529 10 H 0.054 0.946 11 C 0.085 3.915 12 N -0.846 5.846 13 Si 0.887 3.113 14 H -0.273 1.273 15 H -0.283 1.283 16 H -0.284 1.284 17 C 0.082 3.918 18 F -0.130 7.130 19 C -0.146 4.146 20 C 0.070 3.930 21 O -0.485 6.485 22 H 0.097 0.903 23 H 0.057 0.943 24 H 0.055 0.945 25 H 0.138 0.862 26 H 0.300 0.700 27 H 0.317 0.683 28 H 0.256 0.744 29 H 0.139 0.861 30 H 0.380 0.620 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.185 -11.967 -3.953 12.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.225 6.225 3 C 0.047 3.953 4 C -0.199 4.199 5 C -0.076 4.076 6 C 0.145 3.855 7 H 0.075 0.925 8 N -0.334 5.334 9 C -0.568 4.568 10 H 0.073 0.927 11 C -0.122 4.122 12 N -0.480 5.480 13 Si 0.715 3.285 14 H -0.198 1.198 15 H -0.209 1.209 16 H -0.210 1.210 17 C 0.061 3.939 18 F -0.108 7.108 19 C -0.166 4.166 20 C 0.025 3.975 21 O -0.293 6.293 22 H 0.115 0.885 23 H 0.076 0.924 24 H 0.073 0.927 25 H 0.155 0.845 26 H 0.110 0.890 27 H 0.130 0.870 28 H 0.066 0.934 29 H 0.157 0.843 30 H 0.234 0.766 Dipole moment (debyes) X Y Z Total from point charges 2.959 -11.102 -3.263 11.944 hybrid contribution 0.207 -0.317 0.381 0.537 sum 3.166 -11.419 -2.882 12.195 Atomic orbital electron populations 1.23063 0.78708 1.03543 1.01721 1.86088 1.21047 1.26369 1.89045 1.19370 0.91506 0.84796 0.99647 1.20889 1.00449 0.90545 1.08059 1.21839 0.93397 0.99322 0.93007 1.18228 0.83528 0.86044 0.97702 0.92471 1.59148 1.20978 1.50187 1.03052 1.20752 1.35089 1.09029 0.91898 0.92733 1.24926 0.94610 0.96204 0.96494 1.70109 1.30899 1.16473 1.30526 0.86638 0.77697 0.79052 0.85161 1.19806 1.20925 1.20974 1.17198 0.90417 0.80237 1.06007 1.91493 1.82910 1.42507 1.93915 1.21094 1.00673 0.90397 1.04387 1.17133 0.85894 0.85727 1.08762 1.84903 1.72030 1.39522 1.32826 0.88492 0.92388 0.92684 0.84495 0.88955 0.86950 0.93363 0.84271 0.76626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.28 9.81 101.05 0.99 1.27 16 2 O -0.31 -4.76 10.28 -34.39 -0.35 -5.11 16 3 C 0.09 1.57 6.70 -39.14 -0.26 1.31 16 4 C -0.18 -3.25 8.23 -39.47 -0.32 -3.58 16 5 C -0.07 -1.51 5.02 -104.54 -0.52 -2.03 16 6 C 0.25 6.23 2.56 -70.02 -0.18 6.05 16 7 H 0.06 1.56 7.93 -51.93 -0.41 1.15 16 8 N -0.81 -18.06 8.02 -6.65 -0.05 -18.11 16 9 C -0.53 -14.49 8.70 -34.44 -0.30 -14.79 16 10 H 0.05 1.53 7.74 -52.49 -0.41 1.12 16 11 C 0.08 2.35 5.39 -17.82 -0.10 2.26 16 12 N -0.85 -24.35 12.78 55.43 0.71 -23.64 16 13 Si 0.89 21.40 29.54 -169.99 -5.02 16.38 16 14 H -0.27 -6.58 7.11 56.52 0.40 -6.18 16 15 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 16 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 17 C 0.08 1.65 7.23 -39.43 -0.29 1.36 16 18 F -0.13 -2.81 16.64 2.25 0.04 -2.77 16 19 C -0.15 -2.50 9.96 -39.39 -0.39 -2.89 16 20 C 0.07 1.17 6.72 -39.13 -0.26 0.90 16 21 O -0.48 -7.01 13.29 -34.27 -0.46 -7.46 16 22 H 0.10 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.06 0.67 7.66 -51.93 -0.40 0.27 16 24 H 0.05 0.57 7.66 -51.93 -0.40 0.18 16 25 H 0.14 2.25 4.48 -52.49 -0.23 2.02 16 26 H 0.30 5.89 9.06 -39.29 -0.36 5.53 16 27 H 0.32 6.64 7.28 -39.29 -0.29 6.36 16 28 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 29 H 0.14 2.04 8.06 -52.49 -0.42 1.61 16 30 H 0.38 3.55 9.06 45.56 0.41 3.96 16 LS Contribution 267.58 15.07 4.03 4.03 Total: -1.00 -31.67 267.58 -4.80 -36.47 By element: Atomic # 1 Polarization: 12.42 SS G_CDS: -2.06 Total: 10.36 kcal Atomic # 6 Polarization: -8.50 SS G_CDS: -1.64 Total: -10.14 kcal Atomic # 7 Polarization: -42.41 SS G_CDS: 0.65 Total: -41.76 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: -0.81 Total: -12.57 kcal Atomic # 9 Polarization: -2.81 SS G_CDS: 0.04 Total: -2.77 kcal Atomic # 14 Polarization: 21.40 SS G_CDS: -5.02 Total: 16.38 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -31.67 -4.80 -36.47 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238416070.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.776 kcal (2) G-P(sol) polarization free energy of solvation -31.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds