Wall clock time and date at job start Mon Mar 30 2020 03:23:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.36035 * 117.00210 * 2 1 4 4 C 1.38623 * 120.00433 * 359.97438 * 3 2 1 5 5 C 1.38177 * 120.02321 * 179.97438 * 4 3 2 6 6 C 1.38707 * 120.03674 * 359.76225 * 5 4 3 7 7 O 1.35979 * 119.99219 * 180.27762 * 6 5 4 8 8 C 1.38687 * 120.01224 * 0.50978 * 6 5 4 9 9 C 1.50699 * 120.00577 * 179.74529 * 8 6 5 10 10 H 1.09000 * 109.46916 * 164.72798 * 9 8 6 11 11 N 1.46899 * 109.47571 * 44.72599 * 9 8 6 12 12 C 1.50706 * 109.46824 * 284.72131 * 9 8 6 13 13 H 1.07999 * 120.00193 * 0.02562 * 12 9 8 14 14 C 1.37879 * 119.99398 * 180.02562 * 12 9 8 15 15 N 1.31514 * 119.99350 * 180.02562 * 14 12 9 16 16 Si 1.86798 * 120.00608 * 0.02562 * 14 12 9 17 17 H 1.48493 * 109.47326 * 270.00340 * 16 14 12 18 18 H 1.48506 * 109.46545 * 30.00090 * 16 14 12 19 19 H 1.48498 * 109.47210 * 149.99801 * 16 14 12 20 20 C 1.38308 * 119.97646 * 359.46815 * 8 6 5 21 21 F 1.35097 * 120.01693 * 180.29353 * 20 8 6 22 22 H 1.09007 * 109.47342 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.47030 * 299.99195 * 1 2 3 24 24 H 1.09000 * 109.47415 * 59.99681 * 1 2 3 25 25 H 1.07998 * 119.99304 * 0.02562 * 4 3 2 26 26 H 1.07997 * 119.98088 * 180.02562 * 5 4 3 27 27 H 0.96699 * 113.99627 * 270.23487 * 7 6 5 28 28 H 1.00899 * 110.99492 * 299.99890 * 11 9 8 29 29 H 1.00898 * 110.99366 * 63.95282 * 11 9 8 30 30 H 0.97005 * 119.99661 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0466 1.2121 0.0000 4 6 1.2917 2.3747 -0.0005 5 6 1.9186 3.6061 0.0000 6 6 3.3037 3.6800 0.0061 7 8 3.9197 4.8922 0.0123 8 6 4.0604 2.5178 0.0009 9 6 5.5653 2.5982 0.0017 10 1 5.9809 1.6264 0.2680 11 7 6.0015 3.6025 0.9810 12 6 6.0479 2.9920 -1.3706 13 1 5.3361 3.1668 -2.1639 14 6 7.3983 3.1289 -1.6134 15 7 7.8194 3.4730 -2.8108 16 14 8.6294 2.8257 -0.2417 17 1 8.8839 4.0956 0.4847 18 1 8.0817 1.8175 0.7011 19 1 9.9013 2.3229 -0.8202 20 6 3.4335 1.2849 0.0008 21 9 4.1698 0.1523 0.0018 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3633 0.5137 0.8901 24 1 -0.3634 0.5139 -0.8899 25 1 0.2132 2.3182 -0.0005 26 1 1.3299 4.5115 0.0000 27 1 4.0984 5.2471 -0.8693 28 1 5.6290 4.5127 0.7559 29 1 5.7458 3.3286 1.9179 30 1 8.7694 3.5697 -2.9816 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259878065.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:23:42 Heat of formation + Delta-G solvation = -93.326680 kcal Electronic energy + Delta-G solvation = -17622.714321 eV Core-core repulsion = 14526.434052 eV Total energy + Delta-G solvation = -3096.280268 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.25869 -39.97780 -38.47746 -35.44851 -34.56422 -31.83583 -29.98416 -28.89012 -27.01799 -26.21003 -22.93681 -22.21740 -20.28213 -18.15920 -17.60035 -17.26803 -16.56179 -15.94735 -15.79255 -14.82525 -14.71584 -14.63311 -14.31715 -14.01810 -13.67240 -13.16376 -12.63084 -12.32702 -12.02409 -11.97921 -11.67569 -11.29483 -10.89682 -10.63019 -10.43894 -10.29437 -9.68032 -9.32154 -8.53995 -8.27001 -7.78546 -7.55539 -6.03778 -4.15053 1.43008 1.48054 3.25511 3.60538 3.63738 3.73581 3.78276 4.45586 4.66536 4.72981 4.88122 5.07389 5.09004 5.22927 5.32286 5.38263 5.47297 5.86573 6.05515 6.09259 6.26811 6.31794 6.57801 6.84165 7.05311 7.41844 7.57382 8.08699 8.26993 8.32790 8.77992 8.91226 9.59416 11.04903 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.032101 B = 0.008323 C = 0.007466 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 872.024697 B = 3363.241355 C = 3749.435502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.312 6.312 3 C 0.079 3.921 4 C -0.187 4.187 5 C -0.121 4.121 6 C 0.104 3.896 7 O -0.488 6.488 8 C -0.093 4.093 9 C 0.221 3.779 10 H 0.054 0.946 11 N -0.837 5.837 12 C -0.519 4.519 13 H 0.069 0.931 14 C 0.085 3.915 15 N -0.898 5.898 16 Si 0.937 3.063 17 H -0.279 1.279 18 H -0.273 1.273 19 H -0.318 1.318 20 C 0.084 3.916 21 F -0.127 7.127 22 H 0.098 0.902 23 H 0.053 0.947 24 H 0.055 0.945 25 H 0.134 0.866 26 H 0.131 0.869 27 H 0.398 0.602 28 H 0.350 0.650 29 H 0.307 0.693 30 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.496 -1.539 6.100 15.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.226 6.226 3 C 0.034 3.966 4 C -0.206 4.206 5 C -0.140 4.140 6 C 0.059 3.941 7 O -0.298 6.298 8 C -0.097 4.097 9 C 0.111 3.889 10 H 0.072 0.928 11 N -0.373 5.373 12 C -0.557 4.557 13 H 0.087 0.913 14 C -0.119 4.119 15 N -0.535 5.535 16 Si 0.769 3.231 17 H -0.205 1.205 18 H -0.199 1.199 19 H -0.248 1.248 20 C 0.063 3.937 21 F -0.106 7.106 22 H 0.116 0.884 23 H 0.072 0.928 24 H 0.073 0.927 25 H 0.151 0.849 26 H 0.149 0.851 27 H 0.255 0.745 28 H 0.171 0.829 29 H 0.118 0.882 30 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -13.533 -1.914 6.332 15.063 hybrid contribution -0.574 -0.020 0.196 0.607 sum -14.107 -1.934 6.528 15.664 Atomic orbital electron populations 1.23032 0.78686 1.03742 1.01199 1.86141 1.21099 1.26142 1.89232 1.18988 0.90742 0.85323 1.01577 1.20745 0.99579 0.91094 1.09142 1.21177 0.93913 0.97537 1.01358 1.17844 0.89181 0.84834 1.02261 1.84591 1.79264 1.31355 1.34637 1.21690 1.01680 0.90000 0.96336 1.18623 0.82183 0.94046 0.94081 0.92819 1.59470 1.66255 1.07649 1.03891 1.20593 0.92992 1.49697 0.92378 0.91277 1.24963 0.98724 0.92548 0.95688 1.69945 1.15426 1.46682 1.21427 0.85837 0.77277 0.79062 0.80898 1.20497 1.19873 1.24820 1.16682 0.85287 0.82956 1.08756 1.91474 1.76643 1.48343 1.94105 0.88364 0.92792 0.92684 0.84861 0.85134 0.74460 0.82906 0.88203 0.92609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.28 9.81 101.05 0.99 1.27 16 2 O -0.31 -4.89 10.36 -19.85 -0.21 -5.10 16 3 C 0.08 1.36 6.69 -39.20 -0.26 1.10 16 4 C -0.19 -2.66 9.03 -39.46 -0.36 -3.02 16 5 C -0.12 -1.80 9.98 -39.43 -0.39 -2.19 16 6 C 0.10 1.87 6.48 -39.24 -0.25 1.61 16 7 O -0.49 -8.28 10.20 -19.67 -0.20 -8.48 16 8 C -0.09 -1.95 4.89 -104.43 -0.51 -2.46 16 9 C 0.22 5.28 2.16 -70.01 -0.15 5.13 16 10 H 0.05 1.39 6.32 -51.93 -0.33 1.06 16 11 N -0.84 -18.42 6.64 -6.65 -0.04 -18.46 16 12 C -0.52 -14.35 9.14 -34.44 -0.31 -14.67 16 13 H 0.07 2.04 7.98 -52.49 -0.42 1.62 16 14 C 0.09 2.47 5.47 -17.82 -0.10 2.37 16 15 N -0.90 -27.32 13.96 55.43 0.77 -26.54 16 16 Si 0.94 24.31 26.03 -169.99 -4.43 19.88 16 17 H -0.28 -7.19 7.11 56.52 0.40 -6.79 16 18 H -0.27 -7.03 6.54 56.52 0.37 -6.66 16 19 H -0.32 -8.31 7.11 56.52 0.40 -7.91 16 20 C 0.08 1.71 7.25 -39.32 -0.29 1.43 16 21 F -0.13 -2.80 16.11 2.25 0.04 -2.76 16 22 H 0.10 0.74 8.14 -51.93 -0.42 0.32 16 23 H 0.05 0.45 7.66 -51.93 -0.40 0.05 16 24 H 0.05 0.48 7.66 -51.93 -0.40 0.08 16 25 H 0.13 1.42 6.29 -52.49 -0.33 1.09 16 26 H 0.13 1.57 8.06 -52.49 -0.42 1.14 16 27 H 0.40 6.01 9.06 45.56 0.41 6.42 16 28 H 0.35 7.38 5.90 -39.29 -0.23 7.15 16 29 H 0.31 6.07 9.06 -39.29 -0.36 5.72 16 30 H 0.26 7.62 8.31 -40.82 -0.34 7.28 16 LS Contribution 259.41 15.07 3.91 3.91 Total: -1.00 -32.54 259.41 -3.85 -36.39 By element: Atomic # 1 Polarization: 12.65 SS G_CDS: -2.06 Total: 10.59 kcal Atomic # 6 Polarization: -7.79 SS G_CDS: -1.63 Total: -9.42 kcal Atomic # 7 Polarization: -45.74 SS G_CDS: 0.73 Total: -45.01 kcal Atomic # 8 Polarization: -13.17 SS G_CDS: -0.41 Total: -13.58 kcal Atomic # 9 Polarization: -2.80 SS G_CDS: 0.04 Total: -2.76 kcal Atomic # 14 Polarization: 24.31 SS G_CDS: -4.43 Total: 19.88 kcal Total LS contribution 3.91 Total: 3.91 kcal Total: -32.54 -3.85 -36.39 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259878065.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.938 kcal (2) G-P(sol) polarization free energy of solvation -32.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.389 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.327 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds