Wall clock time and date at job start Mon Mar 30 2020 03:21:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35980 * 116.99828 * 2 1 4 4 C 1.38696 * 119.99296 * 0.02562 * 3 2 1 5 5 C 1.38170 * 120.03561 * 180.02562 * 4 3 2 6 6 C 1.38626 * 120.02829 * 0.02562 * 5 4 3 7 7 O 1.36037 * 120.00949 * 179.97438 * 6 5 4 8 8 C 1.38879 * 119.98237 * 359.97438 * 6 5 4 9 9 F 1.35104 * 120.02056 * 180.02562 * 8 6 5 10 10 C 1.38316 * 119.96229 * 0.27487 * 8 6 5 11 11 C 1.50700 * 120.01585 * 179.73017 * 10 8 6 12 12 H 1.09003 * 109.47272 * 195.00212 * 11 10 8 13 13 N 1.46901 * 109.46821 * 315.00095 * 11 10 8 14 14 C 1.50703 * 109.47312 * 74.99490 * 11 10 8 15 15 H 1.07999 * 120.00111 * 0.02562 * 14 11 10 16 16 C 1.37870 * 119.99879 * 179.97438 * 14 11 10 17 17 N 1.31515 * 120.00256 * 0.02562 * 16 14 11 18 18 Si 1.86805 * 120.00022 * 180.02562 * 16 14 11 19 19 H 1.48500 * 109.46982 * 89.99904 * 18 16 14 20 20 H 1.48495 * 109.47344 * 210.00129 * 18 16 14 21 21 H 1.48499 * 109.46862 * 330.00485 * 18 16 14 22 22 H 1.09000 * 109.47173 * 180.02562 * 1 2 3 23 23 H 1.09007 * 109.46775 * 299.99360 * 1 2 3 24 24 H 1.08996 * 109.47135 * 59.99203 * 1 2 3 25 25 H 1.08001 * 119.98678 * 359.97438 * 4 3 2 26 26 H 1.08008 * 119.98534 * 179.97438 * 5 4 3 27 27 H 0.96705 * 113.99740 * 269.97257 * 7 6 5 28 28 H 1.00904 * 110.99870 * 296.04724 * 13 11 10 29 29 H 1.00902 * 111.00531 * 59.99877 * 13 11 10 30 30 H 0.97005 * 119.99674 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 1.2908 2.3747 0.0005 5 6 1.9171 3.6063 0.0000 6 6 3.3013 3.6806 -0.0016 7 8 3.9176 4.8934 -0.0027 8 6 4.0589 2.5166 -0.0021 9 9 5.4080 2.5881 -0.0032 10 6 3.4313 1.2840 -0.0068 11 6 4.2521 0.0202 -0.0136 12 1 3.6172 -0.8241 -0.2825 13 7 5.3388 0.1474 -0.9938 14 6 4.8361 -0.2069 1.3570 15 1 4.6328 0.4936 2.1535 16 6 5.6289 -1.3096 1.5945 17 7 5.8761 -2.1629 0.6248 18 14 6.3522 -1.5915 3.2936 19 1 5.4098 -2.4040 4.1041 20 1 7.6450 -2.3113 3.1681 21 1 6.5766 -0.2832 3.9593 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8901 24 1 -0.3633 0.5139 -0.8899 25 1 0.2122 2.3178 0.0005 26 1 1.3279 4.5115 0.0000 27 1 4.0951 5.2435 -0.8864 28 1 4.9728 0.2360 -1.9299 29 1 5.9420 0.9237 -0.7664 30 1 6.4336 -2.9389 0.7920 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259912632.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:21:26 Heat of formation + Delta-G solvation = -89.163112 kcal Electronic energy + Delta-G solvation = -17674.678118 eV Core-core repulsion = 14578.578395 eV Total energy + Delta-G solvation = -3096.099722 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -48.34067 -39.87850 -38.01291 -35.94289 -34.19685 -31.56207 -29.56550 -28.72841 -26.84231 -25.86721 -23.13171 -21.84143 -20.50218 -17.98893 -17.91433 -16.96005 -16.18730 -15.66535 -15.45531 -15.16622 -14.73152 -14.31795 -14.27838 -13.84482 -13.14806 -13.01724 -12.59843 -12.33905 -12.12526 -11.85347 -11.20480 -11.08640 -10.80310 -10.59116 -10.52827 -10.31760 -9.79886 -9.17062 -8.34417 -8.17346 -7.68105 -7.00780 -5.79740 -3.93398 1.47305 1.57762 3.39531 3.45690 3.50310 3.54475 3.84178 4.35834 4.56383 4.78549 5.02038 5.18222 5.31113 5.34538 5.46874 5.63007 5.68097 5.87383 6.17698 6.25664 6.41324 6.54851 6.61871 7.01989 7.55747 7.66137 7.87024 7.97573 8.25478 8.70297 9.10734 9.21379 9.73497 11.24907 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.021565 B = 0.009809 C = 0.007896 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1298.114941 B = 2853.849462 C = 3545.446647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.294 6.294 3 C 0.146 3.854 4 C -0.210 4.210 5 C -0.102 4.102 6 C 0.025 3.975 7 O -0.489 6.489 8 C 0.113 3.887 9 F -0.118 7.118 10 C -0.130 4.130 11 C 0.264 3.736 12 H 0.062 0.938 13 N -0.815 5.815 14 C -0.526 4.526 15 H 0.050 0.950 16 C 0.085 3.915 17 N -0.846 5.846 18 Si 0.884 3.116 19 H -0.281 1.281 20 H -0.286 1.286 21 H -0.275 1.275 22 H 0.098 0.902 23 H 0.052 0.948 24 H 0.050 0.950 25 H 0.130 0.870 26 H 0.131 0.869 27 H 0.380 0.620 28 H 0.294 0.706 29 H 0.326 0.674 30 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.204 9.042 -4.072 14.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.206 6.206 3 C 0.099 3.901 4 C -0.230 4.230 5 C -0.120 4.120 6 C -0.021 4.021 7 O -0.297 6.297 8 C 0.092 3.908 9 F -0.096 7.096 10 C -0.134 4.134 11 C 0.154 3.846 12 H 0.079 0.921 13 N -0.344 5.344 14 C -0.565 4.565 15 H 0.069 0.931 16 C -0.122 4.122 17 N -0.481 5.481 18 Si 0.712 3.288 19 H -0.208 1.208 20 H -0.212 1.212 21 H -0.200 1.200 22 H 0.117 0.883 23 H 0.071 0.929 24 H 0.069 0.931 25 H 0.148 0.852 26 H 0.149 0.851 27 H 0.234 0.766 28 H 0.104 0.896 29 H 0.142 0.858 30 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -9.740 7.867 -3.270 12.940 hybrid contribution -0.049 1.096 0.297 1.137 sum -9.789 8.963 -2.973 13.601 Atomic orbital electron populations 1.23040 0.79352 1.03773 1.00705 1.86273 1.20263 1.25993 1.88081 1.18590 0.91326 0.84207 0.95966 1.21071 0.99904 0.91770 1.10209 1.20786 0.92604 0.97702 1.00946 1.18306 0.90573 0.83831 1.09358 1.84925 1.80019 1.31873 1.32906 1.17597 0.77430 0.92598 1.03142 1.91375 1.28263 1.96534 1.93437 1.21294 0.92578 0.98605 1.00915 1.18102 0.87211 0.86268 0.93048 0.92072 1.59245 1.21839 1.50937 1.02396 1.20761 1.32805 1.09186 0.93702 0.93128 1.24901 0.95609 0.95678 0.95992 1.70110 1.35753 1.11638 1.30599 0.86750 0.78624 0.78256 0.85198 1.20770 1.21207 1.19987 0.88344 0.92940 0.93139 0.85191 0.85081 0.76583 0.89555 0.85764 0.93507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.33 9.81 101.05 0.99 1.32 16 2 O -0.29 -5.48 9.33 -19.68 -0.18 -5.67 16 3 C 0.15 2.78 6.66 -39.25 -0.26 2.52 16 4 C -0.21 -3.22 9.03 -39.44 -0.36 -3.57 16 5 C -0.10 -1.52 9.98 -39.46 -0.39 -1.91 16 6 C 0.02 0.43 6.71 -39.20 -0.26 0.17 16 7 O -0.49 -7.50 13.37 -19.86 -0.27 -7.77 16 8 C 0.11 2.33 7.01 -39.32 -0.28 2.06 16 9 F -0.12 -2.59 14.15 2.25 0.03 -2.56 16 10 C -0.13 -2.86 4.89 -104.43 -0.51 -3.37 16 11 C 0.26 6.85 2.66 -70.01 -0.19 6.67 16 12 H 0.06 1.74 7.14 -51.93 -0.37 1.37 16 13 N -0.82 -20.40 8.42 -6.65 -0.06 -20.46 16 14 C -0.53 -15.19 8.63 -34.44 -0.30 -15.49 16 15 H 0.05 1.49 7.74 -52.49 -0.41 1.08 16 16 C 0.08 2.46 5.39 -17.82 -0.10 2.37 16 17 N -0.85 -25.39 12.77 55.43 0.71 -24.68 16 18 Si 0.88 22.22 29.54 -169.99 -5.02 17.20 16 19 H -0.28 -6.95 7.11 56.52 0.40 -6.54 16 20 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 21 H -0.27 -6.91 7.11 56.52 0.40 -6.51 16 22 H 0.10 1.02 8.14 -51.93 -0.42 0.60 16 23 H 0.05 0.57 7.66 -51.93 -0.40 0.17 16 24 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 25 H 0.13 1.54 6.29 -52.49 -0.33 1.21 16 26 H 0.13 1.54 8.06 -52.48 -0.42 1.11 16 27 H 0.38 3.82 9.07 45.56 0.41 4.24 16 28 H 0.29 6.57 9.06 -39.29 -0.36 6.22 16 29 H 0.33 8.03 6.13 -39.29 -0.24 7.79 16 30 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 LS Contribution 264.93 15.07 3.99 3.99 Total: -1.00 -33.59 264.93 -4.51 -38.10 By element: Atomic # 1 Polarization: 13.15 SS G_CDS: -2.07 Total: 11.08 kcal Atomic # 6 Polarization: -7.60 SS G_CDS: -1.65 Total: -9.24 kcal Atomic # 7 Polarization: -45.79 SS G_CDS: 0.65 Total: -45.14 kcal Atomic # 8 Polarization: -12.98 SS G_CDS: -0.45 Total: -13.43 kcal Atomic # 9 Polarization: -2.59 SS G_CDS: 0.03 Total: -2.56 kcal Atomic # 14 Polarization: 22.22 SS G_CDS: -5.02 Total: 17.20 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -33.59 -4.51 -38.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259912632.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.066 kcal (2) G-P(sol) polarization free energy of solvation -33.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.098 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds