Wall clock time and date at job start Mon Mar 30 2020 03:23:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.36054 * 116.99531 * 2 1 4 4 C 1.39098 * 120.08188 * 270.02048 * 3 2 1 5 5 O 1.35998 * 120.06007 * 359.95854 * 4 3 2 6 6 C 1.38580 * 119.88162 * 179.97438 * 4 3 2 7 7 C 1.38262 * 120.04072 * 0.02562 * 6 4 3 8 8 C 1.38225 * 120.15517 * 359.97438 * 7 6 4 9 9 C 1.50697 * 119.93713 * 180.02562 * 8 7 6 10 10 H 1.09001 * 109.47001 * 220.00104 * 9 8 7 11 11 N 1.46901 * 109.47313 * 339.99796 * 9 8 7 12 12 C 1.50696 * 109.47538 * 99.99918 * 9 8 7 13 13 H 1.08004 * 119.99520 * 0.02562 * 12 9 8 14 14 C 1.37872 * 120.00540 * 179.97438 * 12 9 8 15 15 N 1.31509 * 120.00019 * 359.97438 * 14 12 9 16 16 Si 1.86803 * 120.00075 * 180.02562 * 14 12 9 17 17 H 1.48496 * 109.47029 * 359.97438 * 16 14 12 18 18 H 1.48503 * 109.47199 * 119.99911 * 16 14 12 19 19 H 1.48504 * 109.47002 * 239.99800 * 16 14 12 20 20 C 1.38449 * 120.12323 * 0.02562 * 8 7 6 21 21 F 1.35101 * 120.02233 * 179.97438 * 20 8 7 22 22 H 1.09005 * 109.47346 * 59.99964 * 1 2 3 23 23 H 1.08998 * 109.46931 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47369 * 299.99668 * 1 2 3 25 25 H 0.96706 * 113.99990 * 89.99410 * 5 4 3 26 26 H 1.08007 * 119.97954 * 180.02562 * 6 4 3 27 27 H 1.07993 * 119.92100 * 180.27347 * 7 6 4 28 28 H 1.00905 * 110.99663 * 59.99931 * 11 9 8 29 29 H 1.00904 * 111.00270 * 183.95523 * 11 9 8 30 30 H 0.96999 * 120.00450 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2123 0.0000 4 6 2.3626 1.8337 -1.2036 5 8 2.0557 1.2302 -2.3831 6 6 2.9912 3.0688 -1.1988 7 6 3.3039 3.6816 0.0005 8 6 2.9905 3.0655 1.1975 9 6 3.3330 3.7381 2.5018 10 1 3.6953 2.9934 3.2105 11 7 4.3774 4.7458 2.2738 12 6 2.1034 4.4067 3.0604 13 1 1.1674 4.3498 2.5247 14 6 2.1731 5.0901 4.2559 15 7 3.3125 5.1581 4.9090 16 14 0.6486 5.9182 4.9485 17 1 -0.4965 5.6952 4.0298 18 1 0.3345 5.3422 6.2808 19 1 0.8962 7.3760 5.0854 20 6 2.3625 1.8316 1.2004 21 9 2.0576 1.2310 2.3716 22 1 -0.3634 0.5139 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 1.1794 1.4562 -2.7242 26 1 3.2370 3.5529 -2.1324 27 1 3.7897 4.6461 0.0021 28 1 4.0656 5.4480 1.6197 29 1 4.6705 5.1660 3.1431 30 1 3.3615 5.6385 5.7502 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260189219.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:23:48 Heat of formation + Delta-G solvation = -100.138362 kcal Electronic energy + Delta-G solvation = -17480.870588 eV Core-core repulsion = 14384.294943 eV Total energy + Delta-G solvation = -3096.575645 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.14819 -39.79799 -37.39227 -36.73323 -34.23251 -31.44984 -29.78883 -28.68152 -26.56855 -26.00687 -23.18948 -22.12909 -20.36996 -18.45618 -17.07232 -16.78211 -16.55503 -16.18656 -15.48746 -14.98623 -14.47551 -14.41636 -14.29991 -14.09740 -13.12679 -12.94843 -12.64900 -12.34545 -11.98368 -11.48795 -11.39937 -11.12141 -10.91915 -10.86156 -10.58333 -10.06683 -9.99261 -9.52524 -8.76550 -8.22700 -7.96650 -7.32368 -6.17960 -4.34568 1.42687 1.56905 3.16445 3.25375 3.29080 3.67920 4.02057 4.22170 4.28080 4.98493 5.04642 5.23701 5.36121 5.43730 5.52946 5.63332 5.74517 5.94230 6.13845 6.43311 6.53773 6.77413 6.85480 7.04302 7.44957 7.52724 7.65239 7.91637 7.96267 8.54757 8.79899 8.98794 9.36895 10.80769 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.028947 B = 0.007874 C = 0.007025 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 967.056656 B = 3555.066564 C = 3984.814120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.322 6.322 3 C 0.025 3.975 4 C 0.084 3.916 5 O -0.486 6.486 6 C -0.146 4.146 7 C -0.075 4.075 8 C -0.057 4.057 9 C 0.242 3.758 10 H 0.056 0.944 11 N -0.849 5.849 12 C -0.543 4.543 13 H 0.056 0.944 14 C 0.068 3.932 15 N -0.891 5.891 16 Si 0.899 3.101 17 H -0.273 1.273 18 H -0.281 1.281 19 H -0.282 1.282 20 C 0.097 3.903 21 F -0.124 7.124 22 H 0.040 0.960 23 H 0.092 0.908 24 H 0.048 0.952 25 H 0.379 0.621 26 H 0.131 0.869 27 H 0.142 0.858 28 H 0.312 0.688 29 H 0.359 0.641 30 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.431 -3.518 -10.248 11.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.239 6.239 3 C -0.020 4.020 4 C 0.039 3.961 5 O -0.295 6.295 6 C -0.165 4.165 7 C -0.093 4.093 8 C -0.059 4.059 9 C 0.132 3.868 10 H 0.074 0.926 11 N -0.379 5.379 12 C -0.583 4.583 13 H 0.074 0.926 14 C -0.135 4.135 15 N -0.530 5.530 16 Si 0.727 3.273 17 H -0.198 1.198 18 H -0.207 1.207 19 H -0.208 1.208 20 C 0.076 3.924 21 F -0.102 7.102 22 H 0.059 0.941 23 H 0.111 0.889 24 H 0.067 0.933 25 H 0.234 0.766 26 H 0.149 0.851 27 H 0.159 0.841 28 H 0.122 0.878 29 H 0.176 0.824 30 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -3.267 -4.519 -10.234 11.654 hybrid contribution -2.317 1.331 1.030 2.864 sum -5.584 -3.188 -9.204 11.228 Atomic orbital electron populations 1.22970 0.79723 1.02950 1.00445 1.86130 1.19468 1.24010 1.94263 1.18923 1.02918 0.88902 0.91228 1.18294 1.01995 0.91855 0.83970 1.84901 1.38596 1.70798 1.35209 1.21322 1.01954 0.94087 0.99154 1.20846 0.98099 1.00418 0.89952 1.20646 0.94596 0.91697 0.98974 1.17913 0.90404 0.91921 0.86592 0.92612 1.59554 1.40596 1.19259 1.18533 1.21723 0.96203 1.33793 1.06571 0.92610 1.25002 0.96492 0.95922 0.96088 1.69736 1.24737 1.42183 1.16307 0.86421 0.82869 0.78990 0.79052 1.19753 1.20718 1.20827 1.17755 1.01859 0.92290 0.80460 1.91486 1.90771 1.82711 1.45279 0.94102 0.88929 0.93342 0.76623 0.85111 0.84080 0.87808 0.82390 0.92327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 11.13 101.05 1.12 1.57 16 2 O -0.32 -5.77 10.07 -34.43 -0.35 -6.11 16 3 C 0.03 0.48 5.74 -39.08 -0.22 0.26 16 4 C 0.08 1.40 6.72 -39.14 -0.26 1.14 16 5 O -0.49 -6.91 13.29 -34.26 -0.46 -7.36 16 6 C -0.15 -2.32 9.98 -39.45 -0.39 -2.72 16 7 C -0.07 -1.36 9.25 -39.58 -0.37 -1.73 16 8 C -0.06 -1.24 5.03 -104.55 -0.53 -1.77 16 9 C 0.24 5.98 2.66 -70.02 -0.19 5.79 16 10 H 0.06 1.56 7.94 -51.93 -0.41 1.15 16 11 N -0.85 -19.40 8.67 -6.65 -0.06 -19.46 16 12 C -0.54 -14.38 8.70 -34.44 -0.30 -14.68 16 13 H 0.06 1.50 7.74 -52.48 -0.41 1.09 16 14 C 0.07 1.80 5.38 -17.82 -0.10 1.70 16 15 N -0.89 -24.18 11.54 55.43 0.64 -23.54 16 16 Si 0.90 20.66 29.54 -169.99 -5.02 15.64 16 17 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 18 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 19 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 20 C 0.10 2.07 7.24 -39.32 -0.28 1.79 16 21 F -0.12 -2.86 16.50 2.25 0.04 -2.82 16 22 H 0.04 0.45 8.14 -51.93 -0.42 0.03 16 23 H 0.09 0.98 8.14 -51.93 -0.42 0.56 16 24 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 25 H 0.38 3.45 9.07 45.56 0.41 3.86 16 26 H 0.13 1.67 8.06 -52.48 -0.42 1.25 16 27 H 0.14 2.38 6.23 -52.49 -0.33 2.05 16 28 H 0.31 6.55 7.27 -39.29 -0.29 6.27 16 29 H 0.36 8.85 7.08 -39.29 -0.28 8.57 16 30 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 LS Contribution 268.88 15.07 4.05 4.05 Total: -1.00 -29.75 268.88 -4.79 -34.54 By element: Atomic # 1 Polarization: 15.83 SS G_CDS: -2.12 Total: 13.71 kcal Atomic # 6 Polarization: -7.13 SS G_CDS: -1.51 Total: -8.65 kcal Atomic # 7 Polarization: -43.58 SS G_CDS: 0.58 Total: -43.00 kcal Atomic # 8 Polarization: -12.67 SS G_CDS: -0.80 Total: -13.48 kcal Atomic # 9 Polarization: -2.86 SS G_CDS: 0.04 Total: -2.82 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -5.02 Total: 15.64 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -29.75 -4.79 -34.54 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260189219.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.597 kcal (2) G-P(sol) polarization free energy of solvation -29.753 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds