Wall clock time and date at job start Mon Mar 30 2020 03:29:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35943 * 116.99477 * 2 1 4 4 C 1.38674 * 120.01193 * 359.97438 * 3 2 1 5 5 C 1.38565 * 119.91615 * 180.02562 * 4 3 2 6 6 O 1.35950 * 120.03220 * 179.97438 * 5 4 3 7 7 C 1.38950 * 119.93386 * 359.72306 * 5 4 3 8 8 F 1.35097 * 119.99921 * 180.27761 * 7 5 4 9 9 C 1.38292 * 120.01519 * 0.52903 * 7 5 4 10 10 C 1.50696 * 119.96077 * 179.76695 * 9 7 5 11 11 H 1.09006 * 109.47145 * 39.72691 * 10 9 7 12 12 N 1.46904 * 109.47112 * 159.72184 * 10 9 7 13 13 C 1.50699 * 109.47606 * 279.72443 * 10 9 7 14 14 H 1.07999 * 119.99669 * 354.47796 * 13 10 9 15 15 C 1.37869 * 120.00302 * 174.47583 * 13 10 9 16 16 N 1.31509 * 120.00282 * 163.83108 * 15 13 10 17 17 Si 1.86807 * 119.99996 * 343.82872 * 15 13 10 18 18 H 1.48496 * 109.46947 * 270.00070 * 17 15 13 19 19 H 1.48501 * 109.46859 * 29.99954 * 17 15 13 20 20 H 1.48491 * 109.47044 * 149.99959 * 17 15 13 21 21 C 1.38258 * 120.07906 * 359.49485 * 9 7 5 22 22 H 1.08997 * 109.47087 * 299.99953 * 1 2 3 23 23 H 1.09002 * 109.47084 * 59.99948 * 1 2 3 24 24 H 1.08999 * 109.46918 * 180.02562 * 1 2 3 25 25 H 1.08003 * 120.03824 * 359.97438 * 4 3 2 26 26 H 0.96701 * 114.00106 * 89.99802 * 6 5 4 27 27 H 1.00904 * 110.99471 * 66.10979 * 12 10 9 28 28 H 1.00901 * 110.99943 * 190.05863 * 12 10 9 29 29 H 0.97003 * 119.99705 * 354.92249 * 16 15 13 30 30 H 1.08001 * 119.96278 * 180.25357 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2113 0.0000 4 6 1.2909 2.3744 -0.0005 5 6 1.9220 3.6081 -0.0011 6 8 1.1840 4.7498 -0.0021 7 6 3.3097 3.6770 0.0047 8 9 3.9263 4.8790 0.0099 9 6 4.0601 2.5153 0.0000 10 6 5.5651 2.5916 0.0010 11 1 5.8877 3.3965 0.6615 12 7 6.1197 1.3167 0.4757 13 6 6.0554 2.8628 -1.3979 14 1 5.3565 2.8807 -2.2211 15 6 7.3962 3.0880 -1.6270 16 7 7.8770 3.0088 -2.8485 17 14 8.5299 3.5059 -0.2023 18 1 8.5687 4.9786 -0.0162 19 1 8.0243 2.8634 1.0374 20 1 9.8976 3.0077 -0.4956 21 6 3.4311 1.2841 0.0000 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 0.2123 2.3187 -0.0014 26 1 0.9701 5.0807 0.8810 27 1 5.9184 0.5709 -0.1734 28 1 7.1119 1.3935 0.6418 29 1 7.3052 2.7202 -3.5770 30 1 4.0190 0.3781 0.0005 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260197622.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:29:15 Heat of formation + Delta-G solvation = -97.025023 kcal Electronic energy + Delta-G solvation = -17374.900935 eV Core-core repulsion = 14278.460295 eV Total energy + Delta-G solvation = -3096.440641 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.09658 -39.96093 -38.01409 -36.69926 -34.22783 -31.86779 -29.45454 -29.37092 -26.92432 -25.95434 -22.99273 -22.04573 -20.21779 -18.13523 -17.82471 -16.97623 -16.92681 -16.74094 -15.68081 -15.12360 -14.90029 -14.34025 -14.00534 -13.74325 -13.38360 -13.00715 -12.76197 -12.49644 -12.28262 -12.00483 -11.90213 -11.09191 -10.99767 -10.62777 -10.38830 -10.17652 -10.02916 -9.36288 -8.57729 -8.36129 -7.76528 -7.57821 -6.54365 -4.28012 1.47150 1.63724 3.29077 3.35862 3.37907 3.48289 3.87505 4.25192 4.35361 4.77208 5.04517 5.10255 5.12998 5.16726 5.38437 5.42275 5.59777 5.81706 6.04845 6.11594 6.40304 6.53306 6.66406 6.94730 7.14258 7.47495 7.66535 7.81250 8.15447 8.29693 8.43100 8.76362 9.43303 10.76790 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.028341 B = 0.008082 C = 0.006972 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 987.723697 B = 3463.818355 C = 4014.923305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.314 6.314 3 C 0.125 3.875 4 C -0.232 4.232 5 C 0.101 3.899 6 O -0.489 6.489 7 C 0.042 3.958 8 F -0.129 7.129 9 C -0.006 4.006 10 C 0.215 3.785 11 H 0.053 0.947 12 N -0.854 5.854 13 C -0.625 4.625 14 H 0.058 0.942 15 C 0.037 3.963 16 N -0.895 5.895 17 Si 1.040 2.960 18 H -0.281 1.281 19 H -0.269 1.269 20 H -0.283 1.283 21 C -0.121 4.121 22 H 0.052 0.948 23 H 0.053 0.947 24 H 0.097 0.903 25 H 0.134 0.866 26 H 0.386 0.614 27 H 0.330 0.670 28 H 0.331 0.669 29 H 0.271 0.729 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.764 -3.179 8.245 15.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.228 6.228 3 C 0.080 3.920 4 C -0.251 4.251 5 C 0.055 3.945 6 O -0.299 6.299 7 C 0.021 3.979 8 F -0.108 7.108 9 C -0.007 4.007 10 C 0.105 3.895 11 H 0.071 0.929 12 N -0.385 5.385 13 C -0.664 4.664 14 H 0.077 0.923 15 C -0.170 4.170 16 N -0.527 5.527 17 Si 0.867 3.133 18 H -0.208 1.208 19 H -0.195 1.195 20 H -0.208 1.208 21 C -0.139 4.139 22 H 0.071 0.929 23 H 0.072 0.928 24 H 0.115 0.885 25 H 0.152 0.848 26 H 0.241 0.759 27 H 0.142 0.858 28 H 0.146 0.854 29 H 0.081 0.919 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -11.546 -2.858 8.622 14.691 hybrid contribution -1.354 0.199 -0.975 1.680 sum -12.900 -2.659 7.648 15.231 Atomic orbital electron populations 1.23009 0.78992 1.03556 1.01193 1.86095 1.20876 1.26728 1.89062 1.18805 0.92141 0.83560 0.97529 1.21053 1.00140 0.91000 1.12887 1.18015 0.87534 0.86010 1.02940 1.84853 1.72363 1.39466 1.33186 1.17798 0.89303 0.81580 1.09179 1.91462 1.82943 1.42296 1.94068 1.20017 0.98060 0.89998 0.92675 1.18215 0.85263 0.89807 0.96204 0.92933 1.59719 1.19034 1.07702 1.52071 1.22485 0.95419 1.55990 0.92516 0.92339 1.25823 0.96602 0.93166 1.01422 1.70783 1.38930 1.42197 1.00836 0.84085 0.76109 0.77809 0.75297 1.20765 1.19466 1.20849 1.20169 0.90213 0.98719 1.04837 0.92891 0.92809 0.88474 0.84820 0.75882 0.85840 0.85450 0.91869 0.83818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.28 9.81 101.05 0.99 1.27 16 2 O -0.31 -4.71 10.50 -19.56 -0.21 -4.91 16 3 C 0.12 2.13 6.68 -39.25 -0.26 1.87 16 4 C -0.23 -3.69 8.97 -39.30 -0.35 -4.04 16 5 C 0.10 1.80 6.71 -39.20 -0.26 1.54 16 6 O -0.49 -7.61 13.37 -19.58 -0.26 -7.87 16 7 C 0.04 0.89 7.24 -39.30 -0.28 0.60 16 8 F -0.13 -2.93 16.49 2.25 0.04 -2.89 16 9 C -0.01 -0.12 5.03 -104.60 -0.53 -0.65 16 10 C 0.21 5.13 2.13 -70.02 -0.15 4.98 16 11 H 0.05 1.30 6.53 -51.93 -0.34 0.96 16 12 N -0.85 -18.24 8.49 -6.65 -0.06 -18.30 16 13 C -0.62 -17.34 8.95 -34.44 -0.31 -17.64 16 14 H 0.06 1.80 7.99 -52.49 -0.42 1.38 16 15 C 0.04 1.04 5.44 -17.82 -0.10 0.94 16 16 N -0.89 -26.94 13.70 55.43 0.76 -26.18 16 17 Si 1.04 24.21 26.56 -169.99 -4.52 19.69 16 18 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 19 H -0.27 -5.66 5.46 56.52 0.31 -5.35 16 20 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 21 C -0.12 -2.34 9.21 -39.40 -0.36 -2.70 16 22 H 0.05 0.46 7.66 -51.93 -0.40 0.06 16 23 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 24 H 0.10 0.73 8.14 -51.93 -0.42 0.31 16 25 H 0.13 1.71 6.30 -52.48 -0.33 1.38 16 26 H 0.39 3.86 9.06 45.56 0.41 4.28 16 27 H 0.33 6.80 7.59 -39.29 -0.30 6.50 16 28 H 0.33 6.99 5.76 -39.29 -0.23 6.77 16 29 H 0.27 8.20 8.73 -40.82 -0.36 7.84 16 30 H 0.14 2.70 6.40 -52.49 -0.34 2.37 16 LS Contribution 260.75 15.07 3.93 3.93 Total: -1.00 -32.10 260.75 -3.93 -36.03 By element: Atomic # 1 Polarization: 16.35 SS G_CDS: -2.00 Total: 14.35 kcal Atomic # 6 Polarization: -12.23 SS G_CDS: -1.61 Total: -13.85 kcal Atomic # 7 Polarization: -45.18 SS G_CDS: 0.70 Total: -44.47 kcal Atomic # 8 Polarization: -12.32 SS G_CDS: -0.47 Total: -12.79 kcal Atomic # 9 Polarization: -2.93 SS G_CDS: 0.04 Total: -2.89 kcal Atomic # 14 Polarization: 24.21 SS G_CDS: -4.52 Total: 19.69 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -32.10 -3.93 -36.03 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260197622.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.998 kcal (2) G-P(sol) polarization free energy of solvation -32.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds