Wall clock time and date at job start Mon Mar 30 2020 03:23:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35952 * 117.00306 * 2 1 4 4 C 1.38603 * 120.03116 * 359.97438 * 3 2 1 5 5 C 1.38643 * 119.91266 * 179.74850 * 4 3 2 6 6 O 1.35942 * 120.00297 * 180.29587 * 5 4 3 7 7 C 1.38724 * 119.98258 * 0.54601 * 5 4 3 8 8 C 1.50700 * 119.96518 * 179.72352 * 7 5 4 9 9 H 1.09004 * 109.47210 * 324.73031 * 8 7 5 10 10 N 1.46899 * 109.47483 * 204.72700 * 8 7 5 11 11 C 1.50702 * 109.46869 * 84.72738 * 8 7 5 12 12 H 1.08002 * 120.00299 * 0.02562 * 11 8 7 13 13 C 1.37884 * 119.99942 * 179.72213 * 11 8 7 14 14 N 1.31514 * 119.99698 * 0.28408 * 13 11 8 15 15 Si 1.86794 * 119.99837 * 180.27476 * 13 11 8 16 16 H 1.48501 * 109.47188 * 90.00793 * 15 13 11 17 17 H 1.48501 * 109.47085 * 210.00372 * 15 13 11 18 18 H 1.48498 * 109.47634 * 330.00608 * 15 13 11 19 19 C 1.38216 * 120.07225 * 359.45355 * 7 5 4 20 20 C 1.38331 * 120.07875 * 0.27290 * 19 7 5 21 21 F 1.35098 * 119.98905 * 180.02562 * 20 19 7 22 22 H 1.08999 * 109.47460 * 59.99937 * 1 2 3 23 23 H 1.09000 * 109.47460 * 180.02562 * 1 2 3 24 24 H 1.09004 * 109.46894 * 300.00330 * 1 2 3 25 25 H 1.08002 * 120.04546 * 0.05022 * 4 3 2 26 26 H 0.96699 * 113.99844 * 270.24666 * 6 5 4 27 27 H 1.00903 * 111.00048 * 300.00270 * 10 8 7 28 28 H 1.00904 * 110.99882 * 63.95460 * 10 8 7 29 29 H 0.97005 * 119.99651 * 179.97438 * 14 13 11 30 30 H 1.07998 * 119.95862 * 180.29030 * 19 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 1.2921 2.3742 -0.0005 5 6 1.9241 3.6082 0.0047 6 8 1.1862 4.7498 0.0103 7 6 3.3096 3.6774 -0.0009 8 6 3.9962 5.0190 -0.0015 9 1 3.4123 5.7257 -0.5913 10 7 5.3367 4.8828 -0.5866 11 6 4.1147 5.5232 1.4138 12 1 3.7315 4.9312 2.2318 13 6 4.7178 6.7374 1.6648 14 7 5.1847 7.4581 0.6687 15 14 4.8715 7.3588 3.4196 16 1 6.1519 6.8834 4.0027 17 1 4.8472 8.8436 3.4229 18 1 3.7378 6.8434 4.2285 19 6 4.0611 2.5174 -0.0004 20 6 3.4334 1.2847 0.0001 21 9 4.1697 0.1520 0.0011 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 0.2135 2.3192 -0.0001 26 1 0.9691 5.0821 -0.8715 27 1 5.8979 4.2324 -0.0574 28 1 5.2819 4.6078 -1.5559 29 1 5.6087 8.3125 0.8453 30 1 5.1396 2.5735 0.0000 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260255024.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:23:50 Heat of formation + Delta-G solvation = -91.966224 kcal Electronic energy + Delta-G solvation = -17284.323475 eV Core-core repulsion = 14188.102201 eV Total energy + Delta-G solvation = -3096.221275 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.43302 -39.97210 -38.26156 -35.87982 -34.15764 -31.58923 -29.43962 -28.96403 -27.31469 -25.74470 -22.98525 -22.17260 -20.26505 -18.61854 -17.13831 -16.86734 -16.37394 -16.10447 -15.89983 -14.82785 -14.62087 -14.52389 -14.28170 -14.00496 -13.75626 -13.23647 -12.75900 -12.21524 -11.94003 -11.75577 -11.30362 -11.19218 -10.90014 -10.73047 -10.50697 -10.28335 -9.76047 -9.23385 -8.46743 -8.41471 -7.58129 -7.17597 -5.87265 -4.00728 1.39821 1.64072 3.26172 3.35746 3.42200 3.46549 3.84138 4.49152 4.53295 4.60547 4.99627 5.08915 5.10897 5.36594 5.38853 5.49096 5.61183 5.79525 6.16521 6.17656 6.27079 6.61824 6.78715 6.94219 7.38960 7.43082 7.91629 8.10464 8.18341 8.57642 8.93733 9.11887 9.66796 11.17141 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.030992 B = 0.007045 C = 0.006611 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 903.239969 B = 3973.481587 C = 4234.634823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.314 6.314 3 C 0.081 3.919 4 C -0.211 4.211 5 C 0.137 3.863 6 O -0.478 6.478 7 C -0.102 4.102 8 C 0.264 3.736 9 H 0.054 0.946 10 N -0.811 5.811 11 C -0.522 4.522 12 H 0.052 0.948 13 C 0.084 3.916 14 N -0.849 5.849 15 Si 0.885 3.115 16 H -0.281 1.281 17 H -0.287 1.287 18 H -0.275 1.275 19 C -0.114 4.114 20 C 0.059 3.941 21 F -0.140 7.140 22 H 0.054 0.946 23 H 0.097 0.903 24 H 0.055 0.945 25 H 0.135 0.865 26 H 0.384 0.616 27 H 0.318 0.682 28 H 0.299 0.701 29 H 0.256 0.744 30 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.082 -10.427 -4.073 13.807 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.229 6.229 3 C 0.035 3.965 4 C -0.230 4.230 5 C 0.091 3.909 6 O -0.287 6.287 7 C -0.106 4.106 8 C 0.155 3.845 9 H 0.071 0.929 10 N -0.338 5.338 11 C -0.560 4.560 12 H 0.071 0.929 13 C -0.123 4.123 14 N -0.484 5.484 15 Si 0.713 3.287 16 H -0.207 1.207 17 H -0.213 1.213 18 H -0.200 1.200 19 C -0.133 4.133 20 C 0.039 3.961 21 F -0.119 7.119 22 H 0.072 0.928 23 H 0.116 0.884 24 H 0.074 0.926 25 H 0.153 0.847 26 H 0.239 0.761 27 H 0.132 0.868 28 H 0.110 0.890 29 H 0.065 0.935 30 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -7.746 -9.733 -3.362 12.886 hybrid contribution -0.390 -0.691 0.427 0.901 sum -8.136 -10.424 -2.935 13.545 Atomic orbital electron populations 1.23024 0.78612 1.03609 1.01399 1.86088 1.21186 1.26077 1.89503 1.18574 0.90486 0.84901 1.02491 1.21301 1.00206 0.91377 1.10128 1.18035 0.89259 0.84887 0.98715 1.84915 1.72048 1.39239 1.32511 1.22042 0.93301 0.99614 0.95629 1.18077 0.85101 0.84689 0.96673 0.92868 1.59180 1.15953 1.55668 1.02989 1.20720 1.40664 1.04197 0.90454 0.92929 1.24912 0.94659 0.96373 0.96320 1.70095 1.36450 1.11786 1.30045 0.86728 0.78402 0.77887 0.85676 1.20738 1.21267 1.20013 1.20781 1.01181 0.89316 1.02060 1.16956 0.85777 0.82793 1.10551 1.91444 1.76660 1.49216 1.94567 0.92751 0.88415 0.92629 0.84692 0.76101 0.86824 0.89040 0.93459 0.84116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.29 16 2 O -0.31 -4.82 10.36 -19.59 -0.20 -5.02 16 3 C 0.08 1.37 6.69 -39.20 -0.26 1.11 16 4 C -0.21 -3.41 8.97 -39.30 -0.35 -3.76 16 5 C 0.14 2.55 6.67 -39.25 -0.26 2.28 16 6 O -0.48 -8.56 12.64 -19.56 -0.25 -8.81 16 7 C -0.10 -2.09 5.00 -104.45 -0.52 -2.61 16 8 C 0.26 6.29 2.57 -70.02 -0.18 6.11 16 9 H 0.05 1.37 7.69 -51.93 -0.40 0.97 16 10 N -0.81 -18.26 8.12 -6.65 -0.05 -18.31 16 11 C -0.52 -14.25 8.71 -34.44 -0.30 -14.55 16 12 H 0.05 1.48 7.74 -52.49 -0.41 1.08 16 13 C 0.08 2.33 5.39 -17.82 -0.10 2.23 16 14 N -0.85 -24.37 12.76 55.43 0.71 -23.66 16 15 Si 0.89 21.52 29.54 -169.99 -5.02 16.50 16 16 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 17 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 18 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 19 C -0.11 -2.15 9.24 -39.56 -0.37 -2.52 16 20 C 0.06 1.08 7.31 -39.30 -0.29 0.79 16 21 F -0.14 -2.55 17.11 2.25 0.04 -2.52 16 22 H 0.05 0.49 7.66 -51.93 -0.40 0.09 16 23 H 0.10 0.75 8.14 -51.93 -0.42 0.32 16 24 H 0.06 0.54 7.66 -51.93 -0.40 0.14 16 25 H 0.14 1.79 6.30 -52.49 -0.33 1.46 16 26 H 0.38 4.90 9.06 45.56 0.41 5.31 16 27 H 0.32 6.86 7.20 -39.29 -0.28 6.58 16 28 H 0.30 5.90 9.06 -39.29 -0.36 5.55 16 29 H 0.26 7.05 8.31 -40.82 -0.34 6.71 16 30 H 0.14 2.52 6.28 -52.49 -0.33 2.19 16 LS Contribution 267.31 15.07 4.03 4.03 Total: -1.00 -31.78 267.31 -4.43 -36.21 By element: Atomic # 1 Polarization: 13.25 SS G_CDS: -2.04 Total: 11.21 kcal Atomic # 6 Polarization: -7.98 SS G_CDS: -1.64 Total: -9.62 kcal Atomic # 7 Polarization: -42.63 SS G_CDS: 0.65 Total: -41.97 kcal Atomic # 8 Polarization: -13.38 SS G_CDS: -0.45 Total: -13.83 kcal Atomic # 9 Polarization: -2.55 SS G_CDS: 0.04 Total: -2.52 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.02 Total: 16.50 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -31.78 -4.43 -36.21 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260255024.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.759 kcal (2) G-P(sol) polarization free energy of solvation -31.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.536 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds