Wall clock time and date at job start Mon Mar 30 2020 03:21:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35906 * 116.99928 * 2 1 4 4 C 1.38751 * 120.01362 * 0.25340 * 3 2 1 5 5 C 1.38377 * 120.02798 * 180.25840 * 4 3 2 6 6 F 1.35098 * 119.97030 * 179.72487 * 5 4 3 7 7 C 1.38424 * 120.05901 * 359.74203 * 5 4 3 8 8 C 1.38713 * 120.02838 * 0.02562 * 7 5 4 9 9 O 1.35896 * 120.01046 * 179.97438 * 8 7 5 10 10 C 1.38625 * 120.01403 * 179.97438 * 3 2 1 11 11 C 1.50698 * 120.02951 * 0.02562 * 10 3 2 12 12 H 1.08998 * 109.47607 * 14.72896 * 11 10 3 13 13 N 1.46901 * 109.47110 * 134.72477 * 11 10 3 14 14 C 1.50702 * 109.47465 * 254.72101 * 11 10 3 15 15 H 1.08002 * 119.99441 * 0.02562 * 14 11 10 16 16 C 1.37871 * 120.00075 * 180.02562 * 14 11 10 17 17 N 1.31514 * 120.00481 * 359.97438 * 16 14 11 18 18 Si 1.86803 * 119.99886 * 179.73007 * 16 14 11 19 19 H 1.48494 * 109.47225 * 180.27306 * 18 16 14 20 20 H 1.48506 * 109.46866 * 300.27330 * 18 16 14 21 21 H 1.48498 * 109.47306 * 60.26614 * 18 16 14 22 22 H 1.09001 * 109.47465 * 299.99893 * 1 2 3 23 23 H 1.08999 * 109.47612 * 59.99996 * 1 2 3 24 24 H 1.09001 * 109.47266 * 179.97438 * 1 2 3 25 25 H 1.08004 * 119.98639 * 359.97202 * 4 3 2 26 26 H 1.08004 * 119.98276 * 180.02562 * 7 5 4 27 27 H 0.96696 * 114.00376 * 270.02894 * 9 8 7 28 28 H 1.00908 * 111.00077 * 296.04383 * 13 11 10 29 29 H 1.00905 * 111.00224 * 59.99512 * 13 11 10 30 30 H 0.97005 * 119.99656 * 359.72741 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2905 2.3748 0.0053 5 6 1.9183 3.6079 -0.0001 6 9 1.1816 4.7403 -0.0005 7 6 3.3006 3.6821 -0.0054 8 6 4.0582 2.5202 -0.0059 9 8 5.4151 2.5935 -0.0116 10 6 3.4302 1.2838 0.0005 11 6 4.2520 0.0206 0.0005 12 1 3.6171 -0.8259 -0.2612 13 7 5.3363 0.1418 -0.9831 14 6 4.8393 -0.1967 1.3713 15 1 4.6373 0.5092 2.1634 16 6 5.6344 -1.2966 1.6141 17 7 5.8800 -2.1564 0.6498 18 14 6.3685 -1.5619 3.3113 19 1 7.1831 -2.8035 3.3096 20 1 7.2301 -0.4050 3.6642 21 1 5.2760 -1.6879 4.3091 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0277 -0.0005 25 1 0.2119 2.3182 0.0090 26 1 3.7894 4.6452 -0.0092 27 1 5.8043 2.6131 -0.8966 28 1 4.9681 0.2237 -1.9190 29 1 5.9394 0.9202 -0.7624 30 1 5.4984 -2.0188 -0.2314 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260429406.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:21:37 Heat of formation + Delta-G solvation = -91.067537 kcal Electronic energy + Delta-G solvation = -17614.796093 eV Core-core repulsion = 14518.613788 eV Total energy + Delta-G solvation = -3096.182305 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -48.75726 -40.14906 -38.27072 -35.49431 -34.66558 -31.32256 -29.50947 -29.24478 -27.04284 -25.34182 -22.77104 -22.17297 -20.73413 -18.68618 -17.18659 -16.83546 -16.64904 -15.77590 -15.68437 -15.25821 -15.16981 -14.42591 -14.40030 -13.99493 -13.56573 -13.28483 -12.79959 -12.21974 -11.90874 -11.57810 -11.51630 -11.14608 -10.71252 -10.64717 -10.57800 -10.01170 -9.91674 -8.79474 -8.30008 -8.21774 -7.73952 -7.41939 -6.07543 -3.86929 1.35801 1.52756 3.43023 3.54349 3.56986 3.73881 3.76010 4.28555 4.65660 4.70007 5.07217 5.13072 5.24795 5.27577 5.38258 5.54744 5.57195 5.64824 6.16095 6.18547 6.28437 6.43184 6.62575 6.82525 7.31646 7.61198 7.92222 8.09253 8.35530 8.74074 8.83561 9.15915 9.93066 11.32604 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.025016 B = 0.008604 C = 0.007566 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1118.996204 B = 3253.348784 C = 3700.104443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.293 6.293 3 C 0.165 3.835 4 C -0.256 4.256 5 C 0.125 3.875 6 F -0.143 7.143 7 C -0.219 4.219 8 C 0.167 3.833 9 O -0.470 6.470 10 C -0.133 4.133 11 C 0.253 3.747 12 H 0.048 0.952 13 N -0.832 5.832 14 C -0.591 4.591 15 H 0.043 0.957 16 C 0.037 3.963 17 N -0.894 5.894 18 Si 1.063 2.937 19 H -0.284 1.284 20 H -0.290 1.290 21 H -0.292 1.292 22 H 0.053 0.947 23 H 0.051 0.949 24 H 0.100 0.900 25 H 0.135 0.865 26 H 0.135 0.865 27 H 0.382 0.618 28 H 0.296 0.704 29 H 0.330 0.670 30 H 0.288 0.712 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.663 8.626 -4.047 12.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.205 6.205 3 C 0.118 3.882 4 C -0.276 4.276 5 C 0.106 3.894 6 F -0.122 7.122 7 C -0.239 4.239 8 C 0.121 3.879 9 O -0.279 6.279 10 C -0.137 4.137 11 C 0.144 3.856 12 H 0.066 0.934 13 N -0.367 5.367 14 C -0.630 4.630 15 H 0.061 0.939 16 C -0.172 4.172 17 N -0.529 5.529 18 Si 0.893 3.107 19 H -0.210 1.210 20 H -0.217 1.217 21 H -0.218 1.218 22 H 0.072 0.928 23 H 0.070 0.930 24 H 0.118 0.882 25 H 0.153 0.847 26 H 0.153 0.847 27 H 0.239 0.761 28 H 0.107 0.893 29 H 0.149 0.851 30 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -7.451 6.726 -2.314 10.301 hybrid contribution -1.824 2.574 -1.480 3.485 sum -9.275 9.300 -3.795 13.672 Atomic orbital electron populations 1.23069 0.79157 1.03909 1.00896 1.86264 1.20517 1.25765 1.87943 1.18370 0.91470 0.83594 0.94730 1.21047 1.00640 0.91254 1.14651 1.16875 0.88521 0.81311 1.02712 1.91456 1.77151 1.49470 1.94120 1.21174 0.92075 0.99769 1.10848 1.17585 0.83182 0.89902 0.97228 1.84974 1.15253 1.95278 1.32399 1.21373 0.91614 0.99407 1.01299 1.18134 0.87112 0.86985 0.93366 0.93424 1.59591 1.22693 1.51368 1.03046 1.21579 1.35866 1.11891 0.93652 0.93873 1.25564 0.94742 0.92542 1.04348 1.70550 1.41479 1.36214 1.04636 0.83659 0.76263 0.75976 0.74832 1.20980 1.21661 1.21842 0.92789 0.93036 0.88171 0.84704 0.84738 0.76063 0.89344 0.85123 0.89911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.32 9.81 101.05 0.99 1.31 16 2 O -0.29 -5.49 9.33 -19.44 -0.18 -5.67 16 3 C 0.17 3.18 6.66 -39.25 -0.26 2.92 16 4 C -0.26 -4.22 9.01 -39.34 -0.35 -4.58 16 5 C 0.13 2.08 7.29 -39.46 -0.29 1.79 16 6 F -0.14 -2.23 17.26 2.25 0.04 -2.19 16 7 C -0.22 -3.69 9.96 -39.34 -0.39 -4.09 16 8 C 0.17 3.18 6.48 -39.25 -0.25 2.93 16 9 O -0.47 -8.62 11.12 -19.41 -0.22 -8.83 16 10 C -0.13 -2.84 4.90 -104.32 -0.51 -3.35 16 11 C 0.25 6.29 2.27 -70.02 -0.16 6.13 16 12 H 0.05 1.31 7.00 -51.93 -0.36 0.94 16 13 N -0.83 -18.69 7.67 -6.65 -0.05 -18.74 16 14 C -0.59 -16.88 8.54 -34.44 -0.29 -17.18 16 15 H 0.04 1.28 7.74 -52.49 -0.41 0.87 16 16 C 0.04 1.08 5.39 -17.82 -0.10 0.98 16 17 N -0.89 -27.31 13.50 55.43 0.75 -26.56 16 18 Si 1.06 26.09 29.90 -169.99 -5.08 21.01 16 19 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 20 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 21 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 22 H 0.05 0.62 7.65 -51.93 -0.40 0.22 16 23 H 0.05 0.55 7.67 -51.93 -0.40 0.15 16 24 H 0.10 1.06 8.14 -51.93 -0.42 0.64 16 25 H 0.14 1.83 6.29 -52.48 -0.33 1.50 16 26 H 0.13 1.97 8.06 -52.48 -0.42 1.55 16 27 H 0.38 5.16 7.81 45.56 0.36 5.51 16 28 H 0.30 5.76 9.06 -39.29 -0.36 5.40 16 29 H 0.33 6.94 5.21 -39.29 -0.20 6.73 16 30 H 0.29 8.78 6.40 -40.82 -0.26 8.52 16 LS Contribution 261.45 15.07 3.94 3.94 Total: -1.00 -33.25 261.45 -4.42 -37.68 By element: Atomic # 1 Polarization: 14.50 SS G_CDS: -2.00 Total: 12.50 kcal Atomic # 6 Polarization: -11.51 SS G_CDS: -1.62 Total: -13.13 kcal Atomic # 7 Polarization: -46.00 SS G_CDS: 0.70 Total: -45.30 kcal Atomic # 8 Polarization: -14.10 SS G_CDS: -0.40 Total: -14.50 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 0.04 Total: -2.19 kcal Atomic # 14 Polarization: 26.09 SS G_CDS: -5.08 Total: 21.01 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -33.25 -4.42 -37.68 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260429406.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.389 kcal (2) G-P(sol) polarization free energy of solvation -33.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.679 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.068 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds