Wall clock time and date at job start Mon Mar 30 2020 03:27:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35989 * 116.99915 * 2 1 4 4 C 1.38561 * 120.05972 * 0.02562 * 3 2 1 5 5 C 1.38423 * 119.97516 * 179.97438 * 4 3 2 6 6 F 1.35098 * 119.95720 * 179.97438 * 5 4 3 7 7 C 1.38452 * 120.09723 * 359.97298 * 5 4 3 8 8 C 1.50703 * 119.94255 * 179.97438 * 7 5 4 9 9 H 1.08998 * 109.47145 * 40.00213 * 8 7 5 10 10 N 1.46900 * 109.47047 * 160.00437 * 8 7 5 11 11 C 1.50700 * 109.47148 * 280.00191 * 8 7 5 12 12 H 1.08002 * 119.99770 * 0.02562 * 11 8 7 13 13 C 1.37871 * 120.00083 * 179.97438 * 11 8 7 14 14 N 1.31514 * 120.00147 * 0.02562 * 13 11 8 15 15 Si 1.86803 * 120.00278 * 180.02562 * 13 11 8 16 16 H 1.48494 * 109.47228 * 179.97438 * 15 13 11 17 17 H 1.48501 * 109.46793 * 300.00001 * 15 13 11 18 18 H 1.48500 * 109.47000 * 60.00094 * 15 13 11 19 19 C 1.38251 * 120.12035 * 0.28228 * 7 5 4 20 20 C 1.38546 * 120.02096 * 359.48508 * 19 7 5 21 21 O 1.36037 * 120.04613 * 180.25623 * 20 19 7 22 22 H 1.09002 * 109.47339 * 299.99923 * 1 2 3 23 23 H 1.08999 * 109.47690 * 59.99921 * 1 2 3 24 24 H 1.09008 * 109.47427 * 179.97438 * 1 2 3 25 25 H 1.07999 * 120.01390 * 359.94948 * 4 3 2 26 26 H 1.00907 * 110.99867 * 296.04432 * 10 8 7 27 27 H 1.00896 * 111.00376 * 59.99771 * 10 8 7 28 28 H 0.97005 * 119.99661 * 359.97438 * 14 13 11 29 29 H 1.08003 * 119.99082 * 179.74145 * 19 7 5 30 30 H 0.96696 * 114.00021 * 270.23128 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 1.2928 2.3745 0.0005 5 6 1.9231 3.6070 0.0011 6 9 1.1881 4.7405 0.0011 7 6 3.3057 3.6797 0.0016 8 6 3.9882 5.0234 0.0016 9 1 3.4506 5.7040 0.6618 10 7 5.3701 4.8706 0.4758 11 6 3.9963 5.5827 -1.3977 12 1 3.5513 5.0215 -2.2061 13 6 4.5708 6.8112 -1.6458 14 7 5.1122 7.4948 -0.6613 15 14 4.5802 7.5049 -3.3802 16 1 5.2517 8.8293 -3.3800 17 1 5.3127 6.5781 -4.2800 18 1 3.1830 7.6590 -3.8592 19 6 4.0613 2.5221 -0.0042 20 6 3.4357 1.2859 0.0001 21 8 4.1788 0.1464 -0.0004 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0277 -0.0005 25 1 0.2142 2.3194 0.0001 26 1 5.3908 4.5579 1.4350 27 1 5.8897 4.2438 -0.1201 28 1 5.1070 7.1347 0.2395 29 1 5.1397 2.5813 -0.0080 30 1 4.3937 -0.1826 -0.8839 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261071033.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:27:43 Heat of formation + Delta-G solvation = -98.785222 kcal Electronic energy + Delta-G solvation = -17338.090475 eV Core-core repulsion = 14241.573506 eV Total energy + Delta-G solvation = -3096.516968 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.30832 -40.17593 -37.84300 -36.65095 -34.35843 -31.50534 -29.42541 -29.08763 -27.41024 -25.40716 -22.90685 -22.24476 -20.55771 -18.47117 -17.75033 -16.91383 -16.79417 -15.93340 -15.56846 -15.03882 -14.78622 -14.48717 -14.44632 -13.87296 -13.67952 -13.36155 -13.02022 -12.18391 -12.03202 -11.83368 -11.53320 -11.23850 -10.77598 -10.68318 -10.56631 -10.21918 -10.00950 -8.89670 -8.49130 -8.35435 -7.65492 -7.55500 -6.20279 -4.04108 1.32506 1.56969 3.23606 3.47085 3.48924 3.67441 3.73518 4.36333 4.59807 4.65519 4.90793 5.03492 5.06754 5.33932 5.37701 5.41263 5.50836 5.72454 5.99108 6.04313 6.27288 6.49629 6.56220 6.95545 7.10203 7.27657 7.85490 7.91996 8.21538 8.58615 8.68593 9.01682 9.79226 11.19542 Molecular weight = 241.09amu Principal moments of inertia in cm(-1) A = 0.031057 B = 0.007169 C = 0.006661 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 901.352860 B = 3904.963123 C = 4202.511943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.308 6.308 3 C 0.104 3.896 4 C -0.234 4.234 5 C 0.134 3.866 6 F -0.127 7.127 7 C -0.118 4.118 8 C 0.244 3.756 9 H 0.045 0.955 10 N -0.829 5.829 11 C -0.608 4.608 12 H 0.045 0.955 13 C 0.040 3.960 14 N -0.888 5.888 15 Si 1.064 2.936 16 H -0.283 1.283 17 H -0.289 1.289 18 H -0.290 1.290 19 C -0.092 4.092 20 C 0.063 3.937 21 O -0.487 6.487 22 H 0.054 0.946 23 H 0.054 0.946 24 H 0.098 0.902 25 H 0.137 0.863 26 H 0.305 0.695 27 H 0.327 0.673 28 H 0.290 0.710 29 H 0.140 0.860 30 H 0.382 0.618 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.720 -13.109 0.686 14.747 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.222 6.222 3 C 0.059 3.941 4 C -0.254 4.254 5 C 0.114 3.886 6 F -0.105 7.105 7 C -0.122 4.122 8 C 0.134 3.866 9 H 0.063 0.937 10 N -0.357 5.357 11 C -0.646 4.646 12 H 0.064 0.936 13 C -0.170 4.170 14 N -0.522 5.522 15 Si 0.893 3.107 16 H -0.208 1.208 17 H -0.216 1.216 18 H -0.216 1.216 19 C -0.111 4.111 20 C 0.017 3.983 21 O -0.295 6.295 22 H 0.073 0.927 23 H 0.073 0.927 24 H 0.116 0.884 25 H 0.155 0.845 26 H 0.116 0.884 27 H 0.141 0.859 28 H 0.102 0.898 29 H 0.157 0.843 30 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges -6.133 -11.091 0.290 12.677 hybrid contribution -1.227 -2.202 0.420 2.555 sum -7.360 -13.293 0.709 15.211 Atomic orbital electron populations 1.23053 0.78881 1.03650 1.01423 1.86120 1.20918 1.26051 1.89086 1.18929 0.91332 0.84076 0.99779 1.20987 1.00543 0.91030 1.12807 1.17226 0.89044 0.81313 1.00993 1.91502 1.76639 1.49047 1.93336 1.21501 0.92133 1.00020 0.98541 1.18278 0.84592 0.85748 0.97958 0.93723 1.59392 1.15736 1.56504 1.04050 1.21594 1.44646 1.06664 0.91721 0.93621 1.25626 0.92823 0.93526 1.05052 1.70556 1.38559 1.40046 1.02992 0.83636 0.76231 0.76272 0.74539 1.20789 1.21609 1.21645 1.20955 1.00785 0.89604 0.99750 1.17657 0.85924 0.86465 1.08238 1.84880 1.71904 1.39720 1.33036 0.92727 0.92695 0.88353 0.84503 0.88428 0.85885 0.89773 0.84274 0.76360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.25 9.81 101.05 0.99 1.24 16 2 O -0.31 -4.49 10.28 -34.25 -0.35 -4.84 16 3 C 0.10 1.73 6.70 -39.13 -0.26 1.46 16 4 C -0.23 -3.94 9.01 -39.39 -0.36 -4.29 16 5 C 0.13 2.71 7.23 -39.43 -0.29 2.43 16 6 F -0.13 -2.75 16.65 2.25 0.04 -2.71 16 7 C -0.12 -2.50 5.02 -104.54 -0.52 -3.03 16 8 C 0.24 5.98 2.18 -70.01 -0.15 5.83 16 9 H 0.05 1.22 7.80 -51.93 -0.41 0.81 16 10 N -0.83 -18.56 7.28 -6.65 -0.05 -18.61 16 11 C -0.61 -16.84 8.70 -34.44 -0.30 -17.14 16 12 H 0.05 1.29 7.74 -52.49 -0.41 0.88 16 13 C 0.04 1.13 5.39 -17.82 -0.10 1.04 16 14 N -0.89 -26.68 13.51 55.43 0.75 -25.93 16 15 Si 1.06 25.25 29.90 -169.99 -5.08 20.17 16 16 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 17 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 18 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 19 C -0.09 -1.70 9.18 -39.46 -0.36 -2.06 16 20 C 0.06 1.06 6.72 -39.13 -0.26 0.80 16 21 O -0.49 -7.29 13.29 -34.40 -0.46 -7.75 16 22 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 23 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 24 H 0.10 0.73 8.14 -51.92 -0.42 0.30 16 25 H 0.14 1.92 6.30 -52.49 -0.33 1.58 16 26 H 0.30 6.01 9.06 -39.29 -0.36 5.65 16 27 H 0.33 6.96 7.27 -39.29 -0.29 6.68 16 28 H 0.29 8.70 6.39 -40.82 -0.26 8.44 16 29 H 0.14 2.40 6.24 -52.48 -0.33 2.07 16 30 H 0.38 3.97 9.06 45.56 0.41 4.38 16 LS Contribution 265.50 15.07 4.00 4.00 Total: -1.00 -32.36 265.50 -4.74 -37.10 By element: Atomic # 1 Polarization: 14.26 SS G_CDS: -1.97 Total: 12.29 kcal Atomic # 6 Polarization: -12.11 SS G_CDS: -1.61 Total: -13.72 kcal Atomic # 7 Polarization: -45.24 SS G_CDS: 0.70 Total: -44.54 kcal Atomic # 8 Polarization: -11.78 SS G_CDS: -0.81 Total: -12.59 kcal Atomic # 9 Polarization: -2.75 SS G_CDS: 0.04 Total: -2.71 kcal Atomic # 14 Polarization: 25.25 SS G_CDS: -5.08 Total: 20.17 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -32.36 -4.74 -37.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261071033.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.686 kcal (2) G-P(sol) polarization free energy of solvation -32.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.736 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.785 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds