Wall clock time and date at job start Mon Mar 30 2020 03:33:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42901 * 114.00018 * 2 1 4 4 C 1.50696 * 109.47503 * 180.02562 * 3 2 1 5 5 N 1.31797 * 119.04852 * 270.00149 * 4 3 2 6 6 C 1.32545 * 121.04350 * 179.97438 * 5 4 3 7 7 C 1.50703 * 120.41622 * 180.27184 * 6 5 4 8 8 C 1.38375 * 119.16287 * 359.97438 * 6 5 4 9 9 F 1.35102 * 120.85819 * 180.02562 * 8 6 5 10 10 C 1.39866 * 118.27588 * 359.97438 * 8 6 5 11 11 N 1.38589 * 120.54607 * 180.02562 * 10 8 6 12 12 C 1.36912 * 119.99717 * 179.97438 * 11 10 8 13 13 H 1.07997 * 120.00275 * 0.02562 * 12 11 10 14 14 C 1.38850 * 119.99970 * 179.97438 * 12 11 10 15 15 N 1.31537 * 119.99824 * 359.97438 * 14 12 11 16 16 Si 1.86803 * 120.00060 * 180.02562 * 14 12 11 17 17 H 1.48503 * 109.46888 * 0.02562 * 16 14 12 18 18 H 1.48495 * 109.47037 * 119.99931 * 16 14 12 19 19 H 1.48497 * 109.46981 * 239.99939 * 16 14 12 20 20 N 1.31719 * 119.05105 * 89.99654 * 4 3 2 21 21 H 1.09002 * 109.46791 * 300.00345 * 1 2 3 22 22 H 1.09000 * 109.46769 * 59.99918 * 1 2 3 23 23 H 1.08993 * 109.46801 * 180.02562 * 1 2 3 24 24 H 1.09004 * 109.47406 * 59.99668 * 3 2 1 25 25 H 1.09004 * 109.47156 * 300.00050 * 3 2 1 26 26 H 1.08997 * 109.46999 * 269.71805 * 7 6 5 27 27 H 1.08990 * 109.47179 * 29.72458 * 7 6 5 28 28 H 1.09002 * 109.46937 * 149.72705 * 7 6 5 29 29 H 0.97002 * 120.00468 * 359.97438 * 11 10 8 30 30 H 0.96999 * 119.99978 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5125 1.1866 -0.0006 5 7 4.1509 1.1358 1.1513 6 6 5.4714 1.0308 1.1969 7 6 6.1865 0.9678 2.5219 8 6 6.1846 0.9735 0.0124 9 9 7.5313 0.8659 0.0189 10 6 5.4749 1.0288 -1.1916 11 7 6.1417 0.9746 -2.4053 12 6 5.4358 1.0291 -3.5772 13 1 4.3595 1.1148 -3.5557 14 6 6.1039 0.9754 -4.7932 15 7 7.4150 0.8726 -4.8193 16 14 5.1408 1.0505 -6.3921 17 1 3.6911 1.1661 -6.0917 18 1 5.5786 2.2315 -7.1786 19 1 5.3873 -0.1859 -7.1768 20 7 4.1496 1.1362 -1.1524 21 1 -0.3633 0.5139 0.8900 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 1.6886 1.8465 0.8900 25 1 1.6886 1.8464 -0.8900 26 1 6.4446 1.9767 2.8438 27 1 5.5363 0.5048 3.2640 28 1 7.0960 0.3764 2.4162 29 1 7.1085 0.8981 -2.4246 30 1 7.8817 0.8354 -5.6688 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309084861.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:33:45 Heat of formation + Delta-G solvation = -45.721155 kcal Electronic energy + Delta-G solvation = -16978.017522 eV Core-core repulsion = 13916.094335 eV Total energy + Delta-G solvation = -3061.923187 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 241.097 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -47.91305 -39.80589 -37.43189 -35.96700 -33.19483 -32.31280 -30.04395 -28.33345 -27.16653 -25.47319 -24.80953 -21.61875 -21.23122 -18.63704 -16.87315 -16.71349 -16.26194 -16.21190 -15.28533 -15.11347 -15.05520 -14.38408 -13.83100 -13.39607 -13.26200 -12.66556 -12.44099 -12.15910 -11.95957 -11.91552 -11.66421 -11.61205 -11.18711 -10.83096 -10.71310 -10.47411 -10.18442 -9.45445 -9.33246 -8.66096 -8.07874 -7.44753 -6.82616 -4.00915 1.75664 2.19841 3.07155 3.08611 3.15581 3.84008 3.91176 4.46249 4.64160 4.83837 5.00849 5.08846 5.22466 5.44121 5.48931 5.64086 5.69817 5.77149 5.79925 5.90083 5.94916 6.27145 6.45443 6.55592 7.13820 7.23682 7.36785 7.67585 8.02791 8.49755 8.94445 9.00682 9.45784 10.31617 Molecular weight = 241.10amu Principal moments of inertia in cm(-1) A = 0.017800 B = 0.008650 C = 0.005948 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1572.617101 B = 3236.295362 C = 4706.459904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.381 6.381 3 C 0.144 3.856 4 C 0.350 3.650 5 N -0.585 5.585 6 C 0.169 3.831 7 C -0.095 4.095 8 C -0.120 4.120 9 F -0.145 7.145 10 C 0.343 3.657 11 N -0.494 5.494 12 C -0.285 4.285 13 H 0.121 0.879 14 C 0.022 3.978 15 N -0.876 5.876 16 Si 0.943 3.057 17 H -0.262 1.262 18 H -0.277 1.277 19 H -0.276 1.276 20 N -0.551 5.551 21 H 0.040 0.960 22 H 0.041 0.959 23 H 0.083 0.917 24 H 0.069 0.931 25 H 0.070 0.930 26 H 0.075 0.925 27 H 0.076 0.924 28 H 0.071 0.929 29 H 0.413 0.587 30 H 0.281 0.719 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.660 0.861 6.862 9.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.298 6.298 3 C 0.065 3.935 4 C 0.077 3.923 5 N -0.313 5.313 6 C 0.030 3.970 7 C -0.152 4.152 8 C -0.154 4.154 9 F -0.124 7.124 10 C 0.093 3.907 11 N -0.098 5.098 12 C -0.417 4.417 13 H 0.139 0.861 14 C -0.184 4.184 15 N -0.512 5.512 16 Si 0.768 3.232 17 H -0.185 1.185 18 H -0.202 1.202 19 H -0.202 1.202 20 N -0.281 5.281 21 H 0.058 0.942 22 H 0.060 0.940 23 H 0.102 0.898 24 H 0.087 0.913 25 H 0.088 0.912 26 H 0.093 0.907 27 H 0.095 0.905 28 H 0.090 0.910 29 H 0.250 0.750 30 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -7.249 0.744 6.356 9.670 hybrid contribution 1.147 0.104 -0.949 1.493 sum -6.102 0.848 5.407 8.197 Atomic orbital electron populations 1.22709 0.81185 1.02527 0.99812 1.87958 1.19298 1.27192 1.95396 1.20810 0.86345 0.85144 1.01176 1.21872 0.95179 0.91612 0.83607 1.67873 1.07442 1.26590 1.29406 1.21016 0.89829 0.92677 0.93507 1.20545 0.99383 1.02622 0.92700 1.18215 0.77966 1.24328 0.94893 1.91337 1.28820 1.95081 1.97178 1.18197 0.88522 0.98719 0.85308 1.40997 1.09139 1.57821 1.01871 1.20197 0.94367 1.45402 0.81708 0.86135 1.25586 0.95972 0.96240 1.00589 1.69684 1.07218 1.45469 1.28788 0.85581 0.79818 0.78165 0.79632 1.18547 1.20244 1.20206 1.67619 1.06633 1.24438 1.29405 0.94187 0.94036 0.89833 0.91306 0.91186 0.90677 0.90483 0.90985 0.74979 0.90882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.42 11.01 101.05 1.11 1.53 16 2 O -0.38 -6.71 10.69 -35.23 -0.38 -7.09 16 3 C 0.14 2.49 6.37 36.00 0.23 2.72 16 4 C 0.35 7.60 7.27 -157.26 -1.14 6.45 16 5 N -0.58 -12.41 10.27 -7.02 -0.07 -12.48 16 6 C 0.17 3.48 6.82 -82.23 -0.56 2.92 16 7 C -0.10 -1.47 10.06 36.01 0.36 -1.11 16 8 C -0.12 -2.72 7.33 -38.92 -0.29 -3.00 16 9 F -0.14 -3.15 16.08 2.25 0.04 -3.11 16 10 C 0.34 8.52 7.47 -154.61 -1.16 7.37 16 11 N -0.49 -12.75 5.41 -10.93 -0.06 -12.81 16 12 C -0.28 -7.49 9.72 -15.06 -0.15 -7.64 16 13 H 0.12 3.20 7.11 -52.49 -0.37 2.83 16 14 C 0.02 0.57 5.50 -17.45 -0.10 0.47 16 15 N -0.88 -22.87 13.05 55.49 0.72 -22.15 16 16 Si 0.94 19.60 29.55 -169.99 -5.02 14.58 16 17 H -0.26 -5.36 7.11 56.52 0.40 -4.96 16 18 H -0.28 -5.66 7.11 56.52 0.40 -5.26 16 19 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 20 N -0.55 -13.38 9.14 -9.89 -0.09 -13.47 16 21 H 0.04 0.40 8.14 -51.93 -0.42 -0.02 16 22 H 0.04 0.45 8.14 -51.93 -0.42 0.03 16 23 H 0.08 0.87 8.14 -51.93 -0.42 0.45 16 24 H 0.07 1.03 8.14 -51.93 -0.42 0.60 16 25 H 0.07 1.13 8.14 -51.93 -0.42 0.71 16 26 H 0.07 1.03 8.14 -51.93 -0.42 0.61 16 27 H 0.08 1.09 8.14 -51.93 -0.42 0.66 16 28 H 0.07 1.05 7.71 -51.93 -0.40 0.65 16 29 H 0.41 10.69 7.46 -40.82 -0.30 10.39 16 30 H 0.28 6.82 8.31 -40.82 -0.34 6.48 16 LS Contribution 274.66 15.07 4.14 4.14 Total: -1.00 -29.23 274.66 -5.58 -34.81 By element: Atomic # 1 Polarization: 11.04 SS G_CDS: -3.17 Total: 7.87 kcal Atomic # 6 Polarization: 11.39 SS G_CDS: -1.68 Total: 9.71 kcal Atomic # 7 Polarization: -61.41 SS G_CDS: 0.50 Total: -60.91 kcal Atomic # 8 Polarization: -6.71 SS G_CDS: -0.38 Total: -7.09 kcal Atomic # 9 Polarization: -3.15 SS G_CDS: 0.04 Total: -3.11 kcal Atomic # 14 Polarization: 19.60 SS G_CDS: -5.02 Total: 14.58 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -29.23 -5.58 -34.81 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309084861.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.911 kcal (2) G-P(sol) polarization free energy of solvation -29.232 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.811 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.721 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds