Wall clock time and date at job start Mon Mar 30 2020 05:11:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.31937 * 119.01511 * 2 1 4 4 C 1.32158 * 121.07935 * 179.97438 * 3 2 1 5 5 C 1.38952 * 119.13041 * 0.02562 * 4 3 2 6 6 Cl 1.73600 * 120.88860 * 179.97438 * 5 4 3 7 7 C 1.39744 * 118.22047 * 359.97438 * 5 4 3 8 8 C 1.48153 * 120.56877 * 180.02562 * 7 5 4 9 9 O 1.21454 * 120.00521 * 359.97438 * 8 7 5 10 10 O 1.34662 * 119.99662 * 179.97438 * 8 7 5 11 11 C 1.34794 * 116.99820 * 179.97438 * 10 8 7 12 12 H 1.07995 * 120.00016 * 359.72945 * 11 10 8 13 13 C 1.38898 * 119.99969 * 179.97438 * 11 10 8 14 14 N 1.31357 * 119.99599 * 0.02562 * 13 11 10 15 15 Si 1.86800 * 119.99849 * 179.97438 * 13 11 10 16 16 H 1.48498 * 109.47028 * 60.00910 * 15 13 11 17 17 H 1.48503 * 109.46851 * 180.02562 * 15 13 11 18 18 H 1.48492 * 109.47412 * 300.00519 * 15 13 11 19 19 N 1.31504 * 119.01166 * 180.25326 * 2 1 3 20 20 H 1.09004 * 109.46735 * 90.00301 * 1 2 3 21 21 H 1.09005 * 109.47359 * 210.00103 * 1 2 3 22 22 H 1.08999 * 109.47440 * 330.00346 * 1 2 3 23 23 H 1.07998 * 120.43398 * 179.97438 * 4 3 2 24 24 H 0.97005 * 119.99716 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1538 0.0000 4 6 3.4677 1.2014 0.0005 5 6 4.1874 0.0128 0.0005 6 17 5.9234 0.0220 0.0005 7 6 3.4763 -1.1903 0.0005 8 6 4.1911 -2.4880 0.0011 9 8 5.4054 -2.5125 0.0011 10 8 3.4944 -3.6403 0.0016 11 6 4.2056 -4.7854 0.0016 12 1 5.2850 -4.7506 -0.0033 13 6 3.5502 -6.0100 0.0026 14 7 2.2373 -6.0522 0.0032 15 14 4.5358 -7.5968 0.0018 16 1 5.3929 -7.6477 1.2135 17 1 3.6076 -8.7560 0.0026 18 1 5.3903 -7.6482 -1.2115 19 7 2.1448 -1.1500 -0.0051 20 1 -0.3633 -0.0001 -1.0277 21 1 -0.3634 -0.8900 0.5139 22 1 -0.3634 0.8900 0.5138 23 1 3.9808 2.1517 0.0001 24 1 1.7796 -6.9074 0.0035 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000745379676.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:11:22 Heat of formation + Delta-G solvation = -25.965250 kcal Electronic energy + Delta-G solvation = -14674.478211 eV Core-core repulsion = 11808.196323 eV Total energy + Delta-G solvation = -2866.281888 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 242.024 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.94988 -38.84951 -36.44691 -35.27814 -33.69532 -32.74776 -32.34499 -28.19177 -26.42699 -24.83094 -22.97214 -20.65732 -18.24605 -17.72437 -17.15778 -15.89403 -15.47001 -15.26630 -14.45756 -14.35623 -14.32267 -13.34288 -12.84045 -12.63164 -12.27715 -11.79367 -11.60129 -11.36966 -11.12186 -11.05336 -10.78389 -10.54890 -10.35144 -10.00876 -9.52252 -8.94136 -8.73995 -8.72200 -6.62323 -4.19605 0.60236 0.96965 2.23610 3.03699 3.08827 3.13864 3.31072 3.59713 4.01104 4.06802 4.07150 4.24394 4.86187 5.00282 5.04655 5.30338 5.64079 5.73227 5.88915 6.31765 6.59972 6.92539 7.19325 7.73793 8.11557 8.53804 8.83014 9.67300 10.53006 Molecular weight = 242.02amu Principal moments of inertia in cm(-1) A = 0.027427 B = 0.007787 C = 0.006085 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1020.646355 B = 3594.741547 C = 4600.242815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 C 0.310 3.690 3 N -0.510 5.510 4 C 0.159 3.841 5 C -0.122 4.122 6 Cl -0.010 7.010 7 C 0.195 3.805 8 C 0.416 3.584 9 O -0.526 6.526 10 O -0.173 6.173 11 C -0.366 4.366 12 H 0.103 0.897 13 C 0.042 3.958 14 N -0.835 5.835 15 Si 0.950 3.050 16 H -0.266 1.266 17 H -0.276 1.276 18 H -0.266 1.266 19 N -0.462 5.462 20 H 0.087 0.913 21 H 0.091 0.909 22 H 0.085 0.915 23 H 0.179 0.821 24 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.731 10.530 0.008 10.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.043 3.957 3 N -0.226 5.226 4 C -0.009 4.009 5 C -0.154 4.154 6 Cl 0.019 6.981 7 C 0.049 3.951 8 C 0.263 3.737 9 O -0.424 6.424 10 O -0.076 6.076 11 C -0.442 4.442 12 H 0.121 0.879 13 C -0.165 4.165 14 N -0.470 5.470 15 Si 0.774 3.226 16 H -0.191 1.191 17 H -0.201 1.201 18 H -0.191 1.191 19 N -0.179 5.179 20 H 0.106 0.894 21 H 0.110 0.890 22 H 0.104 0.896 23 H 0.196 0.804 24 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -1.455 10.285 0.002 10.388 hybrid contribution 1.496 -0.674 -0.020 1.641 sum 0.042 9.611 -0.019 9.611 Atomic orbital electron populations 1.20581 0.85056 1.04371 1.04092 1.23422 0.98645 0.82996 0.90669 1.68247 1.08854 1.30531 1.14964 1.23207 0.89274 0.96926 0.91445 1.22747 0.89336 0.95771 1.07570 1.98402 1.04883 1.98618 1.96175 1.20916 0.88977 0.92514 0.92713 1.19911 0.85559 0.84202 0.83989 1.90735 1.13250 1.86784 1.51598 1.83952 1.39192 1.12621 1.71880 1.21515 0.92454 0.80135 1.50119 0.87931 1.25543 0.96123 0.99075 0.95799 1.69989 1.07359 1.27500 1.42158 0.85632 0.78767 0.78531 0.79687 1.19109 1.20078 1.19121 1.68641 1.07714 1.29762 1.11811 0.89430 0.89022 0.89631 0.80394 0.91396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.03 10.31 36.01 0.37 -0.66 14 2 C 0.31 5.26 7.64 -157.32 -1.20 4.06 14 3 N -0.51 -7.99 10.31 -10.71 -0.11 -8.10 14 4 C 0.16 2.35 11.14 -17.15 -0.19 2.16 14 5 C -0.12 -2.21 6.40 -38.75 -0.25 -2.46 14 6 Cl -0.01 -0.17 26.25 -51.86 -1.36 -1.53 14 7 C 0.20 4.29 6.79 -82.63 -0.56 3.73 14 8 C 0.42 10.86 7.90 34.80 0.27 11.13 14 9 O -0.53 -13.97 13.39 -19.23 -0.26 -14.22 14 10 O -0.17 -5.05 9.59 -21.28 -0.20 -5.26 14 11 C -0.37 -10.61 9.65 30.98 0.30 -10.31 14 12 H 0.10 2.93 6.86 -52.49 -0.36 2.57 14 13 C 0.04 1.16 5.50 -17.51 -0.10 1.06 14 14 N -0.84 -23.78 13.67 55.49 0.76 -23.02 14 15 Si 0.95 20.44 29.55 -169.99 -5.02 15.41 14 16 H -0.27 -5.59 7.11 56.52 0.40 -5.19 14 17 H -0.28 -5.66 7.11 56.52 0.40 -5.26 14 18 H -0.27 -5.60 7.11 56.52 0.40 -5.20 14 19 N -0.46 -9.73 10.14 -7.33 -0.07 -9.80 14 20 H 0.09 0.96 8.14 -51.93 -0.42 0.54 14 21 H 0.09 1.16 8.14 -51.93 -0.42 0.74 14 22 H 0.08 0.87 8.14 -51.93 -0.42 0.45 14 23 H 0.18 1.86 8.06 -52.49 -0.42 1.44 14 24 H 0.28 7.12 8.31 -40.82 -0.34 6.78 14 LS Contribution 247.20 15.07 3.73 3.73 Total: -1.00 -32.14 247.20 -5.09 -37.22 By element: Atomic # 1 Polarization: -1.96 SS G_CDS: -1.19 Total: -3.14 kcal Atomic # 6 Polarization: 10.07 SS G_CDS: -1.35 Total: 8.71 kcal Atomic # 7 Polarization: -41.50 SS G_CDS: 0.57 Total: -40.92 kcal Atomic # 8 Polarization: -19.02 SS G_CDS: -0.46 Total: -19.48 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -5.02 Total: 15.41 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.36 Total: -1.53 kcal Total LS contribution 3.73 Total: 3.73 kcal Total: -32.14 -5.09 -37.22 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000745379676.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.256 kcal (2) G-P(sol) polarization free energy of solvation -32.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.221 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.965 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds