Wall clock time and date at job start Mon Mar 30 2020 03:33:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52998 * 109.46723 * 2 1 4 4 O 1.42897 * 113.41527 * 51.80636 * 3 2 1 5 5 C 1.53504 * 114.20318 * 185.00157 * 3 2 1 6 6 N 1.47066 * 88.04678 * 139.68379 * 5 3 2 7 7 C 1.34784 * 136.05409 * 152.81416 * 6 5 3 8 8 O 1.21436 * 120.00086 * 0.02562 * 7 6 5 9 9 C 1.48830 * 119.99595 * 179.97438 * 7 6 5 10 10 O 1.21503 * 120.00313 * 0.02562 * 9 7 6 11 11 N 1.34775 * 119.99590 * 179.97438 * 9 7 6 12 12 C 1.36118 * 119.99977 * 179.97438 * 11 9 7 13 13 H 1.08000 * 119.99998 * 0.02562 * 12 11 9 14 14 C 1.39587 * 120.00222 * 179.97438 * 12 11 9 15 15 N 1.31013 * 120.00013 * 0.02562 * 14 12 11 16 16 Si 1.86801 * 120.00240 * 180.02562 * 14 12 11 17 17 H 1.48500 * 109.46792 * 90.00131 * 16 14 12 18 18 H 1.48495 * 109.47589 * 210.00469 * 16 14 12 19 19 H 1.48503 * 109.46899 * 330.00592 * 16 14 12 20 20 C 1.47063 * 87.88808 * 332.85048 * 6 5 3 21 21 H 1.09001 * 109.47113 * 179.97438 * 1 2 3 22 22 H 1.09000 * 109.46986 * 299.99564 * 1 2 3 23 23 H 1.08996 * 109.47164 * 59.99955 * 1 2 3 24 24 H 1.09000 * 109.46986 * 240.00436 * 2 1 3 25 25 H 1.08996 * 109.47164 * 120.00045 * 2 1 3 26 26 H 0.96703 * 113.99737 * 313.19287 * 4 3 2 27 27 H 1.09002 * 113.46865 * 24.87475 * 5 3 2 28 28 H 1.08999 * 113.46581 * 254.49251 * 5 3 2 29 29 H 0.96995 * 120.00310 * 0.02562 * 11 9 7 30 30 H 0.96998 * 120.00290 * 180.02562 * 15 14 12 31 31 H 1.08994 * 113.46736 * 141.90207 * 20 6 5 32 32 H 1.09003 * 113.46602 * 272.28166 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 8 1.4647 2.2481 1.0306 5 6 3.5647 1.5710 -0.1221 6 7 3.3458 2.7108 -1.0254 7 6 4.0285 3.8205 -1.3706 8 8 5.1144 4.0440 -0.8751 9 6 3.4519 4.7712 -2.3599 10 8 2.3657 4.5472 -2.8560 11 7 4.1344 5.8811 -2.7047 12 6 3.6073 6.7503 -3.6099 13 1 2.6421 6.5509 -4.0515 14 6 4.3138 7.9002 -3.9666 15 7 5.4845 8.1424 -3.4306 16 14 3.5902 9.0935 -5.2083 17 1 2.7773 10.1136 -4.4987 18 1 4.6888 9.7637 -5.9492 19 1 2.7292 8.3516 -6.1641 20 6 2.0540 2.1073 -1.3855 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 1.8933 -0.5138 -0.8900 25 1 1.8933 -0.5138 0.8899 26 1 0.5041 2.1649 1.1048 27 1 4.0349 0.7161 -0.6080 28 1 4.0533 1.8456 0.8128 29 1 5.0014 6.0600 -2.3084 30 1 5.9753 8.9416 -3.6782 31 1 1.2573 2.8381 -1.5246 32 1 2.1216 1.3960 -2.2087 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000384146568.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:33:57 Heat of formation + Delta-G solvation = -80.329604 kcal Electronic energy + Delta-G solvation = -17479.053314 eV Core-core repulsion = 14441.371035 eV Total energy + Delta-G solvation = -3037.682279 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 242.110 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.52835 -38.60218 -36.90060 -35.32709 -34.13742 -32.78013 -31.39897 -28.75198 -26.01097 -25.71288 -24.10278 -21.92088 -20.24875 -18.76021 -18.13878 -16.99592 -16.53649 -16.13413 -15.32209 -15.12841 -14.76679 -14.45652 -13.98093 -13.74568 -13.44308 -13.17318 -12.57009 -12.51500 -12.26626 -12.06351 -11.74984 -11.64800 -11.28713 -11.18205 -10.77459 -10.50285 -10.38839 -10.17240 -9.88316 -9.69591 -8.39547 -8.19611 -8.18104 -6.64356 -3.96945 2.47446 3.04114 3.16218 3.18732 3.25775 3.82147 4.05434 4.24944 4.29916 4.61236 4.67387 4.89438 5.05491 5.20819 5.35980 5.44735 5.45186 5.65017 5.68547 5.80468 5.86004 5.87804 5.97326 6.07791 6.25807 7.33168 7.56823 7.77481 8.03011 8.30544 8.61064 8.98470 9.34747 9.87766 10.50767 Molecular weight = 242.11amu Principal moments of inertia in cm(-1) A = 0.046017 B = 0.005215 C = 0.004870 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 608.329352 B = 5368.188275 C = 5748.640426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.135 4.135 3 C 0.086 3.914 4 O -0.530 6.530 5 C 0.115 3.885 6 N -0.621 5.621 7 C 0.544 3.456 8 O -0.545 6.545 9 C 0.402 3.598 10 O -0.593 6.593 11 N -0.501 5.501 12 C -0.305 4.305 13 H 0.112 0.888 14 C 0.031 3.969 15 N -0.870 5.870 16 Si 0.940 3.060 17 H -0.273 1.273 18 H -0.280 1.280 19 H -0.265 1.265 20 C 0.091 3.909 21 H 0.061 0.939 22 H 0.056 0.944 23 H 0.062 0.938 24 H 0.080 0.920 25 H 0.075 0.925 26 H 0.378 0.622 27 H 0.096 0.904 28 H 0.083 0.917 29 H 0.404 0.596 30 H 0.280 0.720 31 H 0.094 0.906 32 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.489 -13.811 5.242 16.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C -0.173 4.173 3 C 0.044 3.956 4 O -0.336 6.336 5 C -0.009 4.009 6 N -0.357 5.357 7 C 0.332 3.668 8 O -0.422 6.422 9 C 0.187 3.813 10 O -0.481 6.481 11 N -0.136 5.136 12 C -0.436 4.436 13 H 0.130 0.870 14 C -0.176 4.176 15 N -0.508 5.508 16 Si 0.765 3.235 17 H -0.199 1.199 18 H -0.205 1.205 19 H -0.189 1.189 20 C -0.033 4.033 21 H 0.080 0.920 22 H 0.075 0.925 23 H 0.081 0.919 24 H 0.099 0.901 25 H 0.093 0.907 26 H 0.227 0.773 27 H 0.113 0.887 28 H 0.102 0.898 29 H 0.240 0.760 30 H 0.091 0.909 31 H 0.113 0.887 32 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -6.688 -13.271 5.181 15.738 hybrid contribution -0.251 0.536 -0.447 0.742 sum -6.939 -12.735 4.735 15.256 Atomic orbital electron populations 1.21788 0.95154 1.02445 1.02277 1.21918 0.96840 0.95059 1.03523 1.22581 0.94541 0.89896 0.88622 1.86565 1.25949 1.67230 1.53870 1.23027 0.94075 0.88874 0.94885 1.48917 1.21888 1.20268 1.44612 1.20352 0.83639 0.80640 0.82144 1.90693 1.21023 1.75035 1.55484 1.18806 0.88205 0.85393 0.88936 1.90547 1.21930 1.76653 1.58931 1.41545 1.19465 1.17191 1.35349 1.19861 1.05057 1.00448 1.18225 0.87023 1.25583 0.95356 0.98247 0.98421 1.69487 1.12307 1.27481 1.41520 0.85715 0.78557 0.79524 0.79701 1.19903 1.20522 1.18938 1.23670 0.87255 0.96413 0.95934 0.91997 0.92453 0.91906 0.90131 0.90659 0.77319 0.88662 0.89837 0.76021 0.90936 0.88724 0.89439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.06 9.49 37.16 0.35 -0.71 16 2 C -0.14 -1.07 5.67 -26.73 -0.15 -1.22 16 3 C 0.09 1.03 1.61 -90.00 -0.14 0.89 16 4 O -0.53 -6.99 13.55 -35.23 -0.48 -7.47 16 5 C 0.11 1.64 8.04 -8.50 -0.07 1.57 16 6 N -0.62 -11.95 3.69 -185.69 -0.69 -12.64 16 7 C 0.54 13.05 8.12 -11.87 -0.10 12.95 16 8 O -0.55 -14.05 17.24 5.42 0.09 -13.95 16 9 C 0.40 10.69 7.82 -11.88 -0.09 10.60 16 10 O -0.59 -16.29 14.75 5.36 0.08 -16.21 16 11 N -0.50 -13.94 5.25 -11.59 -0.06 -14.01 16 12 C -0.31 -8.61 9.67 -15.15 -0.15 -8.76 16 13 H 0.11 3.20 7.15 -52.49 -0.38 2.82 16 14 C 0.03 0.81 5.51 -17.40 -0.10 0.72 16 15 N -0.87 -23.82 13.03 55.53 0.72 -23.09 16 16 Si 0.94 20.38 29.56 -169.99 -5.02 15.35 16 17 H -0.27 -5.84 7.11 56.52 0.40 -5.43 16 18 H -0.28 -5.91 7.11 56.52 0.40 -5.50 16 19 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 20 C 0.09 1.39 7.03 -8.41 -0.06 1.33 16 21 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 22 H 0.06 0.34 6.71 -51.93 -0.35 -0.01 16 23 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 24 H 0.08 0.56 8.00 -51.93 -0.42 0.15 16 25 H 0.07 0.54 8.14 -51.93 -0.42 0.12 16 26 H 0.38 3.39 7.06 45.56 0.32 3.71 16 27 H 0.10 1.08 8.10 -51.93 -0.42 0.66 16 28 H 0.08 1.26 8.14 -51.93 -0.42 0.84 16 29 H 0.40 11.37 7.35 -40.82 -0.30 11.07 16 30 H 0.28 7.09 8.30 -40.82 -0.34 6.75 16 31 H 0.09 1.62 7.38 -51.93 -0.38 1.24 16 32 H 0.09 1.14 8.01 -51.93 -0.42 0.73 16 LS Contribution 281.96 15.07 4.25 4.25 Total: -1.00 -33.83 281.96 -4.77 -38.60 By element: Atomic # 1 Polarization: 14.96 SS G_CDS: -3.16 Total: 11.80 kcal Atomic # 6 Polarization: 17.88 SS G_CDS: -0.50 Total: 17.37 kcal Atomic # 7 Polarization: -49.72 SS G_CDS: -0.02 Total: -49.74 kcal Atomic # 8 Polarization: -37.33 SS G_CDS: -0.30 Total: -37.63 kcal Atomic # 14 Polarization: 20.38 SS G_CDS: -5.02 Total: 15.35 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -33.83 -4.77 -38.60 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000384146568.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.733 kcal (2) G-P(sol) polarization free energy of solvation -33.829 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds