Wall clock time and date at job start Mon Mar 30 2020 03:52:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.09009 * 109.46682 * 2 1 4 4 C 1.52997 * 109.47142 * 240.00761 * 2 1 3 5 5 Cl 1.80298 * 109.47378 * 64.99364 * 4 2 1 6 6 C 1.50694 * 109.47180 * 119.99925 * 2 1 3 7 7 O 1.21289 * 119.99659 * 84.91344 * 6 2 1 8 8 N 1.34776 * 120.00487 * 264.91074 * 6 2 1 9 9 C 1.46499 * 119.99990 * 184.88265 * 8 6 2 10 10 C 1.53005 * 109.46962 * 175.79173 * 9 8 6 11 11 C 1.50698 * 115.54873 * 297.94751 * 10 9 8 12 12 H 1.08007 * 120.00205 * 93.69790 * 11 10 9 13 13 C 1.37874 * 120.00199 * 273.69394 * 11 10 9 14 14 N 1.31522 * 119.99797 * 6.92250 * 13 11 10 15 15 Si 1.86797 * 120.00524 * 186.92479 * 13 11 10 16 16 H 1.48500 * 109.46842 * 359.97438 * 15 13 11 17 17 H 1.48501 * 109.47440 * 119.99889 * 15 13 11 18 18 H 1.48506 * 109.47212 * 240.00124 * 15 13 11 19 19 C 1.52999 * 117.50059 * 152.27684 * 10 9 8 20 20 C 1.53000 * 117.49778 * 83.61665 * 10 9 8 21 21 H 1.09000 * 109.47110 * 55.81708 * 1 2 3 22 22 H 1.09004 * 109.46719 * 295.82186 * 1 2 3 23 23 H 1.08994 * 109.47126 * 175.82455 * 1 2 3 24 24 H 1.08992 * 109.47196 * 184.99878 * 4 2 1 25 25 H 1.09012 * 109.46525 * 304.99717 * 4 2 1 26 26 H 0.97003 * 119.99753 * 4.88154 * 8 6 2 27 27 H 1.08999 * 109.47413 * 295.78719 * 9 8 6 28 28 H 1.09000 * 109.47125 * 55.79687 * 9 8 6 29 29 H 0.96998 * 120.00113 * 185.00552 * 14 13 11 30 30 H 1.09002 * 117.49664 * 359.97438 * 19 10 9 31 31 H 1.08993 * 117.49912 * 145.01774 * 19 10 9 32 32 H 1.09004 * 117.49488 * 214.98269 * 20 10 9 33 33 H 1.08998 * 117.50111 * 359.97438 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0278 0.0000 4 6 2.0400 -0.7211 -1.2493 5 17 1.5629 0.2101 -2.7176 6 6 2.0324 -0.7104 1.2304 7 8 2.1467 -1.9179 1.2293 8 7 2.3547 -0.0040 2.3321 9 6 2.9433 -0.6812 3.4902 10 6 3.3085 0.3547 4.5554 11 6 4.3376 1.3755 4.1433 12 1 4.0232 2.3265 3.7391 13 6 5.6805 1.0957 4.2824 14 7 6.0672 -0.1079 4.6451 15 14 6.9506 2.4259 3.9559 16 1 6.2622 3.6821 3.5643 17 1 7.7487 2.6610 5.1859 18 1 7.8506 1.9921 2.8571 19 6 3.3139 -0.1044 6.0148 20 6 2.1996 0.8128 5.5048 21 1 -0.3633 0.5774 -0.8501 22 1 -0.3633 0.4476 0.9251 23 1 -0.3633 -1.0249 -0.0748 24 1 3.1263 -0.7993 -1.2057 25 1 1.6054 -1.7197 -1.2952 26 1 2.1969 0.9527 2.3581 27 1 2.2232 -1.3879 3.9026 28 1 3.8411 -1.2161 3.1807 29 1 7.0058 -0.2856 4.8134 30 1 3.0568 -1.1444 6.2162 31 1 4.0615 0.3321 6.6770 32 1 2.2147 1.8526 5.8316 33 1 1.2098 0.3767 5.3703 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000404157373.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:52:02 Heat of formation + Delta-G solvation = -44.916315 kcal Electronic energy + Delta-G solvation = -15853.346293 eV Core-core repulsion = 13132.878673 eV Total energy + Delta-G solvation = -2720.467619 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 245.092 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.44647 -36.87272 -36.10923 -33.80610 -33.30900 -32.01935 -27.06538 -26.63743 -25.36484 -22.54499 -21.21550 -19.70661 -19.12112 -17.05949 -16.24182 -15.33035 -15.01997 -14.71786 -14.36293 -14.12052 -13.67763 -13.20257 -12.86268 -12.78752 -12.19549 -11.84910 -11.71497 -11.66166 -11.36443 -11.11901 -10.92706 -10.56849 -10.49370 -10.34895 -10.31853 -9.72835 -9.33390 -9.00860 -8.53170 -8.37561 -8.14620 -6.14470 -4.22863 2.16934 3.06980 3.21664 3.31376 3.33143 3.82244 4.31898 4.55462 4.82497 5.01708 5.14464 5.24851 5.42744 5.49702 5.55585 5.72746 5.88844 5.98258 6.11495 6.26905 6.41155 6.47683 6.63868 6.80342 7.03354 7.18711 7.35605 7.42153 7.75840 8.18596 8.27272 8.74470 8.79441 9.45075 10.94136 Molecular weight = 245.09amu Principal moments of inertia in cm(-1) A = 0.022970 B = 0.006256 C = 0.005402 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1218.670992 B = 4474.762455 C = 5182.440780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.121 4.121 3 H 0.101 0.899 4 C -0.009 4.009 5 Cl -0.190 7.190 6 C 0.511 3.489 7 O -0.557 6.557 8 N -0.697 5.697 9 C 0.162 3.838 10 C 0.025 3.975 11 C -0.499 4.499 12 H 0.061 0.939 13 C 0.074 3.926 14 N -0.873 5.873 15 Si 0.888 3.112 16 H -0.272 1.272 17 H -0.283 1.283 18 H -0.284 1.284 19 C -0.147 4.147 20 C -0.211 4.211 21 H 0.071 0.929 22 H 0.064 0.936 23 H 0.063 0.937 24 H 0.097 0.903 25 H 0.104 0.896 26 H 0.401 0.599 27 H 0.036 0.964 28 H 0.074 0.926 29 H 0.261 0.739 30 H 0.065 0.935 31 H 0.084 0.916 32 H 0.079 0.921 33 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.528 1.459 -7.778 11.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.143 4.143 3 H 0.119 0.881 4 C -0.072 4.072 5 Cl -0.164 7.164 6 C 0.296 3.704 7 O -0.437 6.437 8 N -0.344 5.344 9 C 0.039 3.961 10 C 0.024 3.976 11 C -0.536 4.536 12 H 0.079 0.921 13 C -0.131 4.131 14 N -0.509 5.509 15 Si 0.715 3.285 16 H -0.197 1.197 17 H -0.209 1.209 18 H -0.210 1.210 19 C -0.185 4.185 20 C -0.248 4.248 21 H 0.090 0.910 22 H 0.083 0.917 23 H 0.082 0.918 24 H 0.116 0.884 25 H 0.123 0.877 26 H 0.235 0.765 27 H 0.054 0.946 28 H 0.092 0.908 29 H 0.071 0.929 30 H 0.083 0.917 31 H 0.102 0.898 32 H 0.097 0.903 33 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -8.271 0.533 -7.880 11.436 hybrid contribution 0.828 1.170 -0.020 1.433 sum -7.443 1.702 -7.900 10.987 Atomic orbital electron populations 1.21763 0.92044 1.03110 1.02990 1.21545 0.98714 1.01383 0.92657 0.88111 1.24204 1.02982 0.96683 0.83354 1.98698 1.93910 1.78369 1.45408 1.20198 0.78186 0.87681 0.84365 1.90672 1.54981 1.14176 1.83867 1.45979 1.61232 1.12182 1.15048 1.21036 0.96085 0.94006 0.84985 1.19059 0.94879 0.96039 0.87599 1.20379 0.89466 1.00008 1.43786 0.92117 1.24974 0.98394 0.94979 0.94709 1.70024 1.16403 1.19117 1.45366 0.86615 0.81683 0.82191 0.77999 1.19662 1.20893 1.21026 1.22476 0.99593 0.96591 0.99841 1.23046 0.93070 0.99123 1.09548 0.91025 0.91714 0.91784 0.88439 0.87749 0.76466 0.94572 0.90755 0.92887 0.91658 0.89781 0.90283 0.91632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.57 8.96 37.16 0.33 -1.24 16 2 C -0.12 -1.57 2.78 -91.77 -0.26 -1.83 16 3 H 0.10 1.20 8.13 -51.92 -0.42 0.78 16 4 C -0.01 -0.11 5.65 37.16 0.21 0.10 16 5 Cl -0.19 -2.23 28.20 -51.86 -1.46 -3.70 16 6 C 0.51 8.94 6.82 -10.99 -0.07 8.86 16 7 O -0.56 -11.68 16.38 5.55 0.09 -11.59 16 8 N -0.70 -12.88 5.42 -60.29 -0.33 -13.21 16 9 C 0.16 3.55 5.51 -4.04 -0.02 3.53 16 10 C 0.02 0.57 1.42 -155.66 -0.22 0.35 16 11 C -0.50 -12.50 8.57 -34.44 -0.30 -12.80 16 12 H 0.06 1.50 7.82 -52.48 -0.41 1.09 16 13 C 0.07 1.92 5.38 -17.82 -0.10 1.82 16 14 N -0.87 -23.86 12.89 55.43 0.71 -23.15 16 15 Si 0.89 20.21 29.55 -169.99 -5.02 15.19 16 16 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 17 H -0.28 -6.46 7.11 56.52 0.40 -6.05 16 18 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 19 C -0.15 -3.27 9.39 -26.69 -0.25 -3.52 16 20 C -0.21 -4.23 9.95 -26.69 -0.27 -4.50 16 21 H 0.07 0.70 7.42 -51.93 -0.39 0.32 16 22 H 0.06 0.69 8.14 -51.93 -0.42 0.27 16 23 H 0.06 0.73 8.14 -51.93 -0.42 0.31 16 24 H 0.10 1.24 8.14 -51.93 -0.42 0.82 16 25 H 0.10 1.29 8.02 -51.92 -0.42 0.87 16 26 H 0.40 6.73 8.35 -40.82 -0.34 6.39 16 27 H 0.04 0.78 8.11 -51.93 -0.42 0.36 16 28 H 0.07 1.89 8.14 -51.93 -0.42 1.47 16 29 H 0.26 6.86 8.32 -40.82 -0.34 6.52 16 30 H 0.06 1.38 8.14 -51.93 -0.42 0.96 16 31 H 0.08 1.99 8.14 -51.93 -0.42 1.57 16 32 H 0.08 1.56 8.14 -51.93 -0.42 1.14 16 33 H 0.07 1.20 8.14 -51.93 -0.42 0.78 16 LS Contribution 299.50 15.07 4.51 4.51 Total: -1.00 -28.06 299.50 -7.34 -35.40 By element: Atomic # 1 Polarization: 10.68 SS G_CDS: -4.91 Total: 5.76 kcal Atomic # 6 Polarization: -8.28 SS G_CDS: -0.94 Total: -9.22 kcal Atomic # 7 Polarization: -36.74 SS G_CDS: 0.39 Total: -36.35 kcal Atomic # 8 Polarization: -11.68 SS G_CDS: 0.09 Total: -11.59 kcal Atomic # 14 Polarization: 20.21 SS G_CDS: -5.02 Total: 15.19 kcal Atomic # 17 Polarization: -2.23 SS G_CDS: -1.46 Total: -3.70 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -28.06 -7.34 -35.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000404157373.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.517 kcal (2) G-P(sol) polarization free energy of solvation -28.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.399 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds