Wall clock time and date at job start Mon Mar 30 2020 03:52:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47169 * 175.83047 * 3 2 1 5 5 C 1.36876 * 119.99703 * 83.33047 * 4 3 2 6 6 H 1.07998 * 120.00015 * 168.99659 * 5 4 3 7 7 C 1.39044 * 120.00118 * 349.00214 * 5 4 3 8 8 N 1.31363 * 120.00338 * 3.34438 * 7 5 4 9 9 Si 1.86806 * 120.00089 * 183.34721 * 7 5 4 10 10 H 1.48499 * 109.47087 * 89.99626 * 9 7 5 11 11 H 1.48497 * 109.47057 * 209.99903 * 9 7 5 12 12 H 1.48502 * 109.47001 * 330.00041 * 9 7 5 13 13 C 1.34775 * 120.00324 * 263.33063 * 4 3 2 14 14 O 1.21585 * 120.00067 * 182.44143 * 13 4 3 15 15 C 1.47736 * 119.99836 * 2.44002 * 13 4 3 16 16 C 1.39674 * 120.12545 * 222.75326 * 15 13 4 17 17 C 1.37939 * 119.95916 * 180.02562 * 16 15 13 18 18 C 1.38311 * 120.21581 * 359.74687 * 17 16 15 19 19 C 1.38828 * 120.24456 * 0.50898 * 18 17 16 20 20 O 1.35913 * 119.97926 * 179.76259 * 19 18 17 21 21 C 1.38473 * 120.03876 * 359.49178 * 19 18 17 22 22 H 1.09003 * 109.46953 * 55.83018 * 3 2 1 23 23 H 1.09000 * 109.47370 * 295.83305 * 3 2 1 24 24 H 0.97002 * 120.00393 * 180.02562 * 8 7 5 25 25 H 1.08000 * 120.02227 * 0.02562 * 16 15 13 26 26 H 1.08002 * 119.89641 * 180.02562 * 17 16 15 27 27 H 1.07998 * 119.87743 * 180.26066 * 18 17 16 28 28 H 0.96699 * 114.00193 * 269.72815 * 20 19 18 29 29 H 1.08010 * 120.09997 * 180.22986 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0957 1.3784 -0.1004 5 6 3.1937 2.1533 1.0236 6 1 3.7145 3.0986 0.9841 7 6 2.6227 1.7235 2.2163 8 7 2.0466 0.5447 2.2815 9 14 2.6749 2.8222 3.7262 10 1 1.4691 3.6887 3.7497 11 1 2.7041 1.9811 4.9496 12 1 3.8930 3.6703 3.6793 13 6 3.4479 1.8829 -1.2995 14 8 3.8945 3.0112 -1.3770 15 6 3.2914 1.0651 -2.5198 16 6 4.2984 1.0502 -3.4877 17 6 4.1484 0.2858 -4.6261 18 6 3.0057 -0.4712 -4.8106 19 6 1.9971 -0.4589 -3.8567 20 8 0.8743 -1.2011 -4.0459 21 6 2.1368 0.3048 -2.7101 22 1 2.9716 -0.5764 -0.8503 23 1 2.9716 -0.4470 0.9250 24 1 1.6480 0.2450 3.1134 25 1 5.1938 1.6370 -3.3450 26 1 4.9278 0.2748 -5.3736 27 1 2.8959 -1.0711 -5.7020 28 1 0.1665 -0.7326 -4.5090 29 1 1.3543 0.3122 -1.9656 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000019838745.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:52:18 Heat of formation + Delta-G solvation = 3.944910 kcal Electronic energy + Delta-G solvation = -17410.516458 eV Core-core repulsion = 14493.341464 eV Total energy + Delta-G solvation = -2917.174993 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 246.079 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.94968 -38.40203 -36.34090 -35.84443 -34.36735 -32.15448 -30.64513 -29.46333 -27.50789 -25.33420 -22.93455 -22.28031 -19.95383 -18.08745 -17.75046 -16.59330 -16.40365 -16.10596 -15.35500 -14.88738 -14.42948 -14.15180 -13.85565 -13.44457 -12.89814 -12.84549 -12.17479 -12.02373 -11.65136 -11.60347 -11.43355 -11.23555 -11.20705 -10.62272 -10.46417 -10.41326 -10.37467 -9.39042 -8.86373 -8.60079 -8.43757 -8.25156 -6.50793 -4.11674 1.25787 1.47695 3.05571 3.16542 3.20727 3.44539 3.65580 3.89676 4.02013 4.04618 4.38626 4.71703 4.85917 5.06498 5.21371 5.30560 5.49238 5.58335 5.68074 5.97934 6.04955 6.16764 6.52130 6.56704 6.69571 6.83840 6.93811 7.35048 7.74818 7.78519 8.19040 8.72426 8.87861 9.06955 9.60276 10.42919 Molecular weight = 246.08amu Principal moments of inertia in cm(-1) A = 0.030934 B = 0.007979 C = 0.006638 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 904.940609 B = 3508.349750 C = 4217.161538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.483 5.483 2 C 0.257 3.743 3 C 0.206 3.794 4 N -0.432 5.432 5 C -0.298 4.298 6 H 0.114 0.886 7 C 0.028 3.972 8 N -0.889 5.889 9 Si 0.941 3.059 10 H -0.277 1.277 11 H -0.281 1.281 12 H -0.267 1.267 13 C 0.483 3.517 14 O -0.572 6.572 15 C -0.081 4.081 16 C -0.086 4.086 17 C -0.111 4.111 18 C -0.141 4.141 19 C 0.098 3.902 20 O -0.498 6.498 21 C -0.132 4.132 22 H 0.080 0.920 23 H 0.156 0.844 24 H 0.275 0.725 25 H 0.132 0.868 26 H 0.128 0.872 27 H 0.126 0.874 28 H 0.387 0.613 29 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.924 -4.160 -9.070 10.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.164 5.164 2 C -0.059 4.059 3 C 0.079 3.921 4 N -0.150 5.150 5 C -0.425 4.425 6 H 0.132 0.868 7 C -0.173 4.173 8 N -0.531 5.531 9 Si 0.767 3.233 10 H -0.203 1.203 11 H -0.206 1.206 12 H -0.191 1.191 13 C 0.272 3.728 14 O -0.456 6.456 15 C -0.085 4.085 16 C -0.105 4.105 17 C -0.130 4.130 18 C -0.160 4.160 19 C 0.053 3.947 20 O -0.308 6.308 21 C -0.151 4.151 22 H 0.097 0.903 23 H 0.173 0.827 24 H 0.087 0.913 25 H 0.150 0.850 26 H 0.146 0.854 27 H 0.144 0.856 28 H 0.243 0.757 29 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.710 -4.129 -8.588 9.681 hybrid contribution -0.112 0.658 0.625 0.915 sum 1.598 -3.470 -7.963 8.832 Atomic orbital electron populations 1.80933 1.13483 1.08580 1.13427 1.29156 0.95362 0.92341 0.89074 1.19479 0.81674 0.85587 1.05352 1.43595 1.54585 1.10595 1.06222 1.19936 1.33216 1.03523 0.85785 0.86811 1.25384 0.95309 0.96783 0.99851 1.69695 1.37131 1.17955 1.28290 0.85666 0.79088 0.79222 0.79295 1.20252 1.20604 1.19104 1.17909 0.85326 0.87060 0.82460 1.90644 1.50110 1.19243 1.85586 1.20137 0.94661 0.97054 0.96645 1.21233 0.98588 0.97955 0.92737 1.20936 0.97460 0.96944 0.97621 1.21434 0.94913 1.00564 0.99121 1.18325 0.88538 0.93911 0.93891 1.84834 1.24599 1.40674 1.80648 1.22066 0.98963 0.95607 0.98488 0.90274 0.82740 0.91314 0.85021 0.85422 0.85625 0.75737 0.84631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.69 18.48 42.15 0.78 -10.91 15 2 C 0.26 5.91 10.51 -20.76 -0.22 5.69 15 3 C 0.21 4.39 4.76 -6.83 -0.03 4.36 15 4 N -0.43 -10.35 2.60 -119.05 -0.31 -10.66 15 5 C -0.30 -7.65 9.48 -15.00 -0.14 -7.80 15 6 H 0.11 3.04 7.20 -52.49 -0.38 2.67 15 7 C 0.03 0.69 5.38 -17.45 -0.09 0.60 15 8 N -0.89 -21.78 8.07 55.50 0.45 -21.33 15 9 Si 0.94 19.88 29.55 -169.99 -5.02 14.85 15 10 H -0.28 -6.02 7.11 56.52 0.40 -5.61 15 11 H -0.28 -5.80 7.11 56.52 0.40 -5.40 15 12 H -0.27 -5.55 7.11 56.52 0.40 -5.15 15 13 C 0.48 11.34 7.24 -12.38 -0.09 11.25 15 14 O -0.57 -15.12 16.56 5.29 0.09 -15.04 15 15 C -0.08 -1.56 4.97 -104.99 -0.52 -2.08 15 16 C -0.09 -1.38 9.66 -39.16 -0.38 -1.76 15 17 C -0.11 -1.45 10.02 -39.66 -0.40 -1.84 15 18 C -0.14 -1.85 9.98 -39.34 -0.39 -2.25 15 19 C 0.10 1.50 6.70 -39.28 -0.26 1.24 15 20 O -0.50 -7.02 13.50 -19.47 -0.26 -7.28 15 21 C -0.13 -2.39 7.52 -39.00 -0.29 -2.68 15 22 H 0.08 1.47 5.66 -51.93 -0.29 1.18 15 23 H 0.16 3.39 5.99 -51.93 -0.31 3.08 15 24 H 0.28 6.57 8.31 -40.82 -0.34 6.23 15 25 H 0.13 2.03 8.06 -52.49 -0.42 1.61 15 26 H 0.13 1.24 8.06 -52.49 -0.42 0.81 15 27 H 0.13 1.32 8.06 -52.49 -0.42 0.89 15 28 H 0.39 3.64 9.06 45.56 0.41 4.06 15 29 H 0.14 2.73 4.20 -52.48 -0.22 2.51 15 LS Contribution 260.88 15.07 3.93 3.93 Total: -1.00 -30.47 260.88 -4.37 -34.84 By element: Atomic # 1 Polarization: 8.06 SS G_CDS: -1.19 Total: 6.86 kcal Atomic # 6 Polarization: 7.55 SS G_CDS: -2.82 Total: 4.73 kcal Atomic # 7 Polarization: -43.82 SS G_CDS: 0.92 Total: -42.90 kcal Atomic # 8 Polarization: -22.14 SS G_CDS: -0.18 Total: -22.32 kcal Atomic # 14 Polarization: 19.88 SS G_CDS: -5.02 Total: 14.85 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -30.47 -4.37 -34.84 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000019838745.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.785 kcal (2) G-P(sol) polarization free energy of solvation -30.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.840 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.945 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds