Wall clock time and date at job start Mon Mar 30 2020 04:25:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39715 * 120.18955 * 93.87151 * 3 2 1 5 5 C 1.37821 * 119.89674 * 179.97438 * 4 3 2 6 6 C 1.50707 * 119.84851 * 180.02562 * 5 4 3 7 7 H 1.08993 * 109.47137 * 359.97438 * 6 5 4 8 8 C 1.52992 * 109.47338 * 120.00301 * 6 5 4 9 9 N 1.46905 * 109.46900 * 295.62698 * 8 6 5 10 10 C 1.53008 * 109.46869 * 240.00091 * 6 5 4 11 11 C 1.50696 * 109.46904 * 174.57524 * 10 6 5 12 12 H 1.08000 * 120.00046 * 354.96382 * 11 10 6 13 13 C 1.37878 * 119.99784 * 174.97154 * 11 10 6 14 14 N 1.31511 * 120.00105 * 359.97438 * 13 11 10 15 15 Si 1.86799 * 119.99824 * 179.97438 * 13 11 10 16 16 H 1.48504 * 109.47208 * 89.99518 * 15 13 11 17 17 H 1.48498 * 109.47171 * 209.99488 * 15 13 11 18 18 H 1.48498 * 109.47418 * 329.99588 * 15 13 11 19 19 C 1.38508 * 120.29971 * 0.27905 * 5 4 3 20 20 C 1.38115 * 120.39059 * 359.44309 * 19 5 4 21 21 C 1.38647 * 120.08829 * 0.55151 * 20 19 5 22 22 O 1.35708 * 120.14658 * 179.70122 * 21 20 19 23 23 H 1.08002 * 120.05213 * 359.96135 * 4 3 2 24 24 H 1.09001 * 109.47715 * 175.62315 * 8 6 5 25 25 H 1.09007 * 109.47404 * 55.61905 * 8 6 5 26 26 H 1.00906 * 110.99895 * 174.79957 * 9 8 6 27 27 H 1.00903 * 110.99709 * 298.74504 * 9 8 6 28 28 H 1.08998 * 109.47288 * 294.57530 * 10 6 5 29 29 H 1.09006 * 109.46699 * 54.57567 * 10 6 5 30 30 H 0.97005 * 119.99880 * 180.02562 * 14 13 11 31 31 H 1.08005 * 119.80706 * 179.70507 * 19 5 4 32 32 H 1.07998 * 119.95252 * 180.25909 * 20 19 5 33 33 H 0.96695 * 114.00103 * 270.02561 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2706 0.0825 -1.2049 5 6 4.6488 0.0832 -1.1978 6 6 5.4055 0.1721 -2.4981 7 1 4.6992 0.2273 -3.3264 8 6 6.2843 1.4244 -2.4922 9 7 5.4324 2.6201 -2.4408 10 6 6.2863 -1.0683 -2.6614 11 6 6.9404 -1.0448 -4.0188 12 1 6.6850 -0.2712 -4.7279 13 6 7.8646 -2.0109 -4.3555 14 7 8.1758 -2.9526 -3.4919 15 14 8.6748 -1.9821 -6.0384 16 1 9.9161 -1.1693 -5.9764 17 1 9.0112 -3.3688 -6.4496 18 1 7.7413 -1.3853 -7.0272 19 6 5.3415 -0.0028 -0.0015 20 6 4.6593 -0.0785 1.1970 21 6 3.2729 -0.0803 1.2088 22 8 2.6014 -0.1607 2.3853 23 1 2.7345 0.1449 -2.1404 24 1 6.8894 1.4481 -3.3985 25 1 6.9374 1.4059 -1.6196 26 1 5.9889 3.4570 -2.3505 27 1 4.8315 2.6710 -3.2498 28 1 7.0544 -1.0728 -1.8880 29 1 5.6726 -1.9644 -2.5692 30 1 8.8263 -3.6321 -3.7287 31 1 6.4215 -0.0064 -0.0056 32 1 5.2066 -0.1410 2.1260 33 1 2.4078 -1.0654 2.6667 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260298546.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:25:58 Heat of formation + Delta-G solvation = -5.412481 kcal Electronic energy + Delta-G solvation = -16942.611648 eV Core-core repulsion = 14160.863982 eV Total energy + Delta-G solvation = -2781.747666 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 246.111 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.92089 -37.47772 -36.37271 -35.08637 -32.92244 -31.32111 -31.08335 -28.68713 -25.48489 -23.88339 -22.95344 -22.13730 -20.22645 -18.66363 -17.31102 -16.58949 -15.81093 -15.55070 -15.22442 -14.73655 -14.25660 -13.95715 -13.83126 -13.43716 -13.05693 -12.91260 -12.68623 -12.46102 -12.03974 -11.78040 -11.56371 -11.39175 -10.95328 -10.76281 -10.61848 -10.51088 -9.95101 -9.61619 -9.23308 -8.78917 -8.47553 -8.26185 -8.11579 -6.10588 -4.13357 0.93772 1.48284 2.79421 3.14790 3.24197 3.32114 3.33938 3.89559 4.03157 4.23368 4.36911 5.00914 5.02578 5.25370 5.26299 5.51691 5.53386 5.66429 5.85648 6.05671 6.07789 6.34969 6.39531 6.46849 6.60924 6.72679 6.94772 6.96127 7.47344 7.56080 7.58007 7.64081 7.64996 7.78909 7.87848 8.27400 8.91955 9.51113 11.00229 Molecular weight = 246.11amu Principal moments of inertia in cm(-1) A = 0.028595 B = 0.005300 C = 0.005188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 978.957126 B = 5281.345292 C = 5395.553871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.270 3.730 3 C -0.064 4.064 4 C -0.054 4.054 5 C -0.039 4.039 6 C -0.046 4.046 7 H 0.068 0.932 8 C 0.074 3.926 9 N -0.855 5.855 10 C 0.031 3.969 11 C -0.521 4.521 12 H 0.055 0.945 13 C 0.060 3.940 14 N -0.892 5.892 15 Si 0.889 3.111 16 H -0.281 1.281 17 H -0.286 1.286 18 H -0.274 1.274 19 C -0.062 4.062 20 C -0.144 4.144 21 C 0.132 3.868 22 O -0.497 6.497 23 H 0.130 0.870 24 H 0.046 0.954 25 H 0.065 0.935 26 H 0.332 0.668 27 H 0.334 0.666 28 H 0.025 0.975 29 H 0.018 0.982 30 H 0.261 0.739 31 H 0.134 0.866 32 H 0.133 0.867 33 H 0.390 0.610 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.156 5.952 6.765 9.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.044 4.044 3 C -0.068 4.068 4 C -0.075 4.075 5 C -0.039 4.039 6 C -0.065 4.065 7 H 0.086 0.914 8 C -0.056 4.056 9 N -0.383 5.383 10 C -0.006 4.006 11 C -0.559 4.559 12 H 0.073 0.927 13 C -0.142 4.142 14 N -0.531 5.531 15 Si 0.717 3.283 16 H -0.207 1.207 17 H -0.212 1.212 18 H -0.199 1.199 19 C -0.081 4.081 20 C -0.162 4.162 21 C 0.085 3.915 22 O -0.307 6.307 23 H 0.148 0.852 24 H 0.064 0.936 25 H 0.084 0.916 26 H 0.143 0.857 27 H 0.145 0.855 28 H 0.044 0.956 29 H 0.037 0.963 30 H 0.071 0.929 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges -6.076 6.068 7.447 11.366 hybrid contribution 1.430 -0.340 -1.755 2.289 sum -4.646 5.728 5.692 9.316 Atomic orbital electron populations 1.81173 1.12123 1.09773 1.07979 1.25588 0.92559 0.93193 0.93093 1.16364 0.84329 1.11502 0.94559 1.20962 0.93878 0.96937 0.95707 1.20013 0.92499 0.94982 0.96394 1.20448 0.97075 0.97355 0.91626 0.91403 1.21841 0.94108 0.88534 1.01102 1.58845 1.26135 1.05130 1.48179 1.19167 0.93753 0.90345 0.97368 1.21165 1.23265 1.11723 0.99792 0.92660 1.24982 0.96752 0.95469 0.96950 1.69947 1.33410 1.14834 1.34892 0.86644 0.79764 0.77329 0.84563 1.20689 1.21203 1.19923 1.21185 1.00843 0.95056 0.91034 1.21262 0.92444 1.03348 0.99163 1.18265 0.89844 1.00106 0.83324 1.84761 1.76915 1.32735 1.36303 0.85182 0.93581 0.91615 0.85660 0.85454 0.95621 0.96332 0.92889 0.84840 0.84903 0.75360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -7.23 18.54 41.84 0.78 -6.45 16 2 C 0.27 4.10 14.87 -22.47 -0.33 3.77 16 3 C -0.06 -0.90 5.75 -106.70 -0.61 -1.52 16 4 C -0.05 -0.79 9.37 -39.18 -0.37 -1.16 16 5 C -0.04 -0.61 4.49 -104.67 -0.47 -1.08 16 6 C -0.05 -0.81 2.16 -91.77 -0.20 -1.01 16 7 H 0.07 1.21 7.86 -51.93 -0.41 0.80 16 8 C 0.07 1.19 5.94 -3.83 -0.02 1.17 16 9 N -0.85 -11.41 9.29 -10.37 -0.10 -11.50 16 10 C 0.03 0.70 4.17 -27.88 -0.12 0.59 16 11 C -0.52 -13.23 8.25 -34.44 -0.28 -13.51 16 12 H 0.06 1.36 7.30 -52.49 -0.38 0.98 16 13 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 14 N -0.89 -25.03 13.29 55.43 0.74 -24.30 16 15 Si 0.89 20.36 29.54 -169.99 -5.02 15.34 16 16 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 17 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 18 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 19 C -0.06 -0.90 8.69 -39.53 -0.34 -1.25 16 20 C -0.14 -1.83 9.98 -39.48 -0.39 -2.23 16 21 C 0.13 1.74 6.71 -38.71 -0.26 1.48 16 22 O -0.50 -5.84 12.94 -18.83 -0.24 -6.08 16 23 H 0.13 1.77 7.93 -52.49 -0.42 1.35 16 24 H 0.05 0.82 6.97 -51.93 -0.36 0.46 16 25 H 0.07 1.05 7.25 -51.92 -0.38 0.68 16 26 H 0.33 3.81 9.08 -39.29 -0.36 3.45 16 27 H 0.33 4.16 9.05 -39.29 -0.36 3.80 16 28 H 0.03 0.61 7.55 -51.93 -0.39 0.22 16 29 H 0.02 0.46 8.14 -51.93 -0.42 0.03 16 30 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 31 H 0.13 1.90 7.11 -52.48 -0.37 1.53 16 32 H 0.13 1.40 8.06 -52.49 -0.42 0.97 16 33 H 0.39 2.81 9.06 45.56 0.41 3.22 16 LS Contribution 294.43 15.07 4.44 4.44 Total: -1.00 -29.67 294.43 -5.90 -35.57 By element: Atomic # 1 Polarization: 9.21 SS G_CDS: -2.99 Total: 6.22 kcal Atomic # 6 Polarization: -9.75 SS G_CDS: -3.50 Total: -13.25 kcal Atomic # 7 Polarization: -43.66 SS G_CDS: 1.42 Total: -42.25 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -0.24 Total: -6.08 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -29.67 -5.90 -35.57 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260298546.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.161 kcal (2) G-P(sol) polarization free energy of solvation -29.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds