Wall clock time and date at job start Mon Mar 30 2020 03:37:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38155 * 120.07394 * 2 1 4 4 C 1.38398 * 120.28182 * 179.97438 * 3 2 1 5 5 C 1.38144 * 120.28494 * 359.97438 * 4 3 2 6 6 C 1.38627 * 119.85219 * 0.02562 * 5 4 3 7 7 C 1.38616 * 120.07805 * 180.28720 * 2 1 3 8 8 N 1.39288 * 133.33186 * 359.30217 * 7 2 1 9 9 C 1.46506 * 125.81920 * 0.73910 * 8 7 2 10 10 C 1.50702 * 109.46851 * 269.71797 * 9 8 7 11 11 H 1.07998 * 120.00221 * 359.97438 * 10 9 8 12 12 C 1.37881 * 119.99982 * 180.02562 * 10 9 8 13 13 N 1.31514 * 119.99617 * 359.97438 * 12 10 9 14 14 Si 1.86793 * 119.99935 * 179.97438 * 12 10 9 15 15 H 1.48496 * 109.47291 * 59.99738 * 14 12 10 16 16 H 1.48506 * 109.46846 * 180.02562 * 14 12 10 17 17 H 1.48502 * 109.47327 * 299.99974 * 14 12 10 18 18 C 1.34637 * 108.36290 * 180.47381 * 8 7 2 19 19 O 1.21687 * 125.15484 * 180.29951 * 18 8 7 20 20 N 1.34635 * 109.68542 * 0.26080 * 18 8 7 21 21 C 1.46500 * 125.81560 * 180.02562 * 20 18 8 22 22 H 1.09003 * 109.46781 * 89.99952 * 1 2 3 23 23 H 1.08998 * 109.47096 * 210.00252 * 1 2 3 24 24 H 1.09004 * 109.47261 * 330.00359 * 1 2 3 25 25 H 1.08007 * 119.85753 * 0.02562 * 3 2 1 26 26 H 1.07997 * 119.85492 * 179.97438 * 4 3 2 27 27 H 1.07998 * 120.07693 * 180.02562 * 5 4 3 28 28 H 1.08994 * 109.46947 * 29.71218 * 9 8 7 29 29 H 1.08997 * 109.47271 * 149.71735 * 9 8 7 30 30 H 0.96998 * 119.99644 * 180.02562 * 13 12 10 31 31 H 1.08995 * 109.47047 * 359.97438 * 21 20 18 32 32 H 1.09000 * 109.46856 * 119.98236 * 21 20 18 33 33 H 1.08996 * 109.47334 * 239.97881 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1993 1.1956 0.0000 4 6 3.5833 1.2006 0.0005 5 6 4.2843 0.0102 0.0016 6 6 3.5984 -1.1945 0.0016 7 6 2.2017 -1.1995 -0.0060 8 7 1.8041 -2.5344 -0.0004 9 6 0.4208 -3.0170 -0.0006 10 6 -0.0538 -3.1822 1.4202 11 1 0.6089 -2.9514 2.2412 12 6 -1.3336 -3.6292 1.6720 13 7 -2.1403 -3.9109 0.6722 14 14 -1.9215 -3.8348 3.4331 15 1 -1.8539 -2.5270 4.1333 16 1 -3.3233 -4.3250 3.4328 17 1 -1.0544 -4.8164 4.1331 18 6 2.9076 -3.3057 -0.0006 19 8 2.9120 -4.5225 -0.0016 20 7 4.0056 -2.5265 -0.0004 21 6 5.3922 -2.9991 -0.0010 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3633 -0.8899 0.5139 24 1 -0.3634 0.8900 0.5138 25 1 1.6582 2.1303 0.0004 26 1 4.1175 2.1392 0.0001 27 1 5.3642 0.0180 0.0024 28 1 -0.2153 -2.2964 -0.5145 29 1 0.3709 -3.9770 -0.5143 30 1 -3.0407 -4.2250 0.8494 31 1 5.4046 -4.0889 -0.0013 32 1 5.9015 -2.6296 -0.8911 33 1 5.9023 -2.6302 0.8888 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261176415.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:37:58 Heat of formation + Delta-G solvation = 22.965180 kcal Electronic energy + Delta-G solvation = -17925.755749 eV Core-core repulsion = 15145.238631 eV Total energy + Delta-G solvation = -2780.517118 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 246.111 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.84220 -37.92400 -35.50029 -35.24463 -32.79707 -31.73819 -29.48707 -28.10044 -26.39844 -25.80777 -23.07399 -21.94990 -21.31008 -19.40005 -17.39721 -16.83577 -16.45736 -15.67697 -15.41687 -14.83472 -14.17855 -13.94764 -13.77217 -13.43354 -13.06645 -13.01156 -12.37964 -12.25393 -12.10075 -11.85189 -11.78043 -11.20274 -10.95787 -10.77542 -10.38419 -10.34820 -10.17259 -9.93958 -9.67235 -9.21653 -8.56940 -7.75366 -7.13899 -6.18748 -4.25831 1.59469 1.80686 2.83632 3.26824 3.30785 3.34703 3.65275 3.94371 4.10306 4.35446 4.91724 5.09088 5.15958 5.22579 5.44247 5.47714 5.59977 5.69031 5.73638 5.86745 6.07557 6.18757 6.25054 6.43573 6.62048 6.77954 6.92228 7.01520 7.05849 7.23325 7.25014 7.52005 7.77982 7.98372 8.10894 8.74119 8.97175 9.40269 10.88370 Molecular weight = 246.11amu Principal moments of inertia in cm(-1) A = 0.022375 B = 0.008690 C = 0.007009 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1251.079190 B = 3221.421803 C = 3993.754854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.061 4.061 3 C -0.122 4.122 4 C -0.123 4.123 5 C -0.118 4.118 6 C 0.078 3.922 7 C 0.113 3.887 8 N -0.514 5.514 9 C 0.251 3.749 10 C -0.535 4.535 11 H 0.061 0.939 12 C 0.067 3.933 13 N -0.890 5.890 14 Si 0.902 3.098 15 H -0.274 1.274 16 H -0.284 1.284 17 H -0.275 1.275 18 C 0.672 3.328 19 O -0.559 6.559 20 N -0.551 5.551 21 C 0.103 3.897 22 H 0.064 0.936 23 H 0.106 0.894 24 H 0.060 0.940 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.120 0.880 28 H 0.056 0.944 29 H 0.049 0.951 30 H 0.267 0.733 31 H 0.090 0.910 32 H 0.066 0.934 33 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.350 10.258 -2.073 14.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C -0.065 4.065 3 C -0.142 4.142 4 C -0.143 4.143 5 C -0.139 4.139 6 C -0.024 4.024 7 C 0.008 3.992 8 N -0.231 5.231 9 C 0.134 3.866 10 C -0.574 4.574 11 H 0.079 0.921 12 C -0.136 4.136 13 N -0.528 5.528 14 Si 0.729 3.271 15 H -0.199 1.199 16 H -0.210 1.210 17 H -0.200 1.200 18 C 0.375 3.625 19 O -0.436 6.436 20 N -0.274 5.274 21 C -0.039 4.039 22 H 0.083 0.917 23 H 0.125 0.875 24 H 0.079 0.921 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.138 0.862 28 H 0.074 0.926 29 H 0.067 0.933 30 H 0.077 0.923 31 H 0.108 0.892 32 H 0.084 0.916 33 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 10.108 9.124 -2.125 13.782 hybrid contribution -0.255 -0.190 0.975 1.025 sum 9.854 8.934 -1.150 13.351 Atomic orbital electron populations 1.21119 0.90266 1.05054 1.02427 1.18993 0.96538 0.89516 1.01409 1.20687 0.93864 0.96485 1.03122 1.20635 0.93964 0.96626 1.03109 1.19841 0.98975 0.89145 1.05976 1.18086 0.92195 0.85502 1.06648 1.18045 0.91165 0.86555 1.03404 1.45915 1.08957 1.03015 1.65243 1.19708 0.71603 0.96548 0.98721 1.21288 0.98394 1.46081 0.91607 0.92124 1.24903 0.96249 0.94618 0.97872 1.69912 1.07722 1.44204 1.30950 0.86483 0.77705 0.78787 0.84129 1.19940 1.20957 1.20048 1.16101 0.80113 0.85388 0.80903 1.90961 1.84531 1.09103 1.59002 1.45081 1.07178 1.04532 1.70605 1.21586 0.78643 1.01837 1.01791 0.91708 0.87548 0.92060 0.85744 0.85858 0.86244 0.92601 0.93311 0.92283 0.89164 0.91554 0.91537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.33 8.85 36.01 0.32 -2.01 16 2 C -0.06 -1.08 5.89 -104.51 -0.62 -1.70 16 3 C -0.12 -1.72 9.69 -39.55 -0.38 -2.10 16 4 C -0.12 -1.57 10.03 -39.56 -0.40 -1.96 16 5 C -0.12 -1.65 10.02 -39.47 -0.40 -2.04 16 6 C 0.08 1.39 6.83 -83.80 -0.57 0.82 16 7 C 0.11 2.29 6.74 -83.80 -0.56 1.72 16 8 N -0.51 -12.20 2.77 -120.19 -0.33 -12.54 16 9 C 0.25 6.59 4.95 -5.19 -0.03 6.57 16 10 C -0.54 -14.96 8.36 -34.44 -0.29 -15.25 16 11 H 0.06 1.74 7.81 -52.49 -0.41 1.33 16 12 C 0.07 1.85 5.46 -17.82 -0.10 1.76 16 13 N -0.89 -25.33 13.29 55.43 0.74 -24.60 16 14 Si 0.90 21.45 29.54 -169.99 -5.02 16.43 16 15 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 16 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 17 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 18 C 0.67 15.89 8.45 -87.17 -0.74 15.15 16 19 O -0.56 -14.93 17.24 5.20 0.09 -14.84 16 20 N -0.55 -10.35 3.18 -126.33 -0.40 -10.75 16 21 C 0.10 1.39 11.16 59.85 0.67 2.06 16 22 H 0.06 1.07 8.14 -51.93 -0.42 0.64 16 23 H 0.11 2.29 4.72 -51.93 -0.25 2.05 16 24 H 0.06 0.91 8.09 -51.93 -0.42 0.49 16 25 H 0.12 1.41 8.06 -52.48 -0.42 0.99 16 26 H 0.12 1.16 8.06 -52.49 -0.42 0.73 16 27 H 0.12 1.31 8.06 -52.49 -0.42 0.89 16 28 H 0.06 1.42 5.78 -51.93 -0.30 1.12 16 29 H 0.05 1.41 8.03 -51.93 -0.42 0.99 16 30 H 0.27 7.20 8.31 -40.82 -0.34 6.86 16 31 H 0.09 1.26 7.67 -51.93 -0.40 0.86 16 32 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 33 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 LS Contribution 282.77 15.07 4.26 4.26 Total: -1.00 -32.20 282.77 -7.62 -39.82 By element: Atomic # 1 Polarization: 3.06 SS G_CDS: -3.86 Total: -0.80 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: -3.09 Total: 3.01 kcal Atomic # 7 Polarization: -47.88 SS G_CDS: 0.00 Total: -47.88 kcal Atomic # 8 Polarization: -14.93 SS G_CDS: 0.09 Total: -14.84 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.43 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -32.20 -7.62 -39.82 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261176415.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.785 kcal (2) G-P(sol) polarization free energy of solvation -32.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.820 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.965 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds