Wall clock time and date at job start Mon Mar 30 2020 03:48:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.31563 * 118.66395 * 2 1 4 4 C 1.33134 * 120.70139 * 179.97438 * 3 2 1 5 5 C 1.40949 * 118.83091 * 359.97438 * 4 3 2 6 6 C 1.41095 * 107.03095 * 180.02562 * 5 4 3 7 7 N 1.30282 * 108.48913 * 0.02562 * 6 5 4 8 8 N 1.36349 * 134.63266 * 180.02562 * 4 3 2 9 9 C 1.46499 * 125.87703 * 359.97438 * 8 4 3 10 10 C 1.40882 * 118.25071 * 0.02562 * 5 4 3 11 11 N 1.38058 * 120.81967 * 179.97438 * 10 5 4 12 12 C 1.46499 * 120.00436 * 354.10314 * 11 10 5 13 13 C 1.36906 * 120.00070 * 174.10030 * 11 10 5 14 14 H 1.08000 * 119.99583 * 30.98830 * 13 11 10 15 15 C 1.38857 * 120.00256 * 211.27299 * 13 11 10 16 16 N 1.31524 * 120.00127 * 17.79378 * 15 13 11 17 17 Si 1.86808 * 120.00003 * 197.79973 * 15 13 11 18 18 H 1.48499 * 109.46996 * 89.99410 * 17 15 13 19 19 H 1.48499 * 109.46891 * 209.99665 * 17 15 13 20 20 H 1.48498 * 109.46589 * 329.99481 * 17 15 13 21 21 N 1.32053 * 118.66783 * 180.27290 * 2 1 3 22 22 H 1.08995 * 109.47348 * 90.00192 * 1 2 3 23 23 H 1.09001 * 109.46999 * 209.99613 * 1 2 3 24 24 H 1.08996 * 109.47743 * 329.99513 * 1 2 3 25 25 H 1.08000 * 125.75392 * 179.97438 * 6 5 4 26 26 H 1.09005 * 109.46861 * 90.00612 * 9 8 4 27 27 H 1.09001 * 109.47262 * 209.99910 * 9 8 4 28 28 H 1.08996 * 109.47549 * 330.00348 * 9 8 4 29 29 H 1.08999 * 109.47519 * 185.17083 * 12 11 10 30 30 H 1.08995 * 109.46871 * 305.17611 * 12 11 10 31 31 H 1.09009 * 109.46985 * 65.17221 * 12 11 10 32 32 H 0.97000 * 120.00014 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1380 1.1544 0.0000 4 6 3.4685 1.2017 0.0005 5 6 4.1917 -0.0081 0.0016 6 6 5.5617 0.3294 0.0025 7 7 5.6674 1.6279 0.0026 8 7 4.3914 2.2055 0.0011 9 6 4.0986 3.6409 0.0008 10 6 3.4686 -1.2172 0.0016 11 7 4.1231 -2.4328 0.0021 12 6 5.5816 -2.4796 -0.1277 13 6 3.4092 -3.5946 0.1239 14 1 2.4039 -3.6540 -0.2663 15 6 3.9755 -4.6946 0.7543 16 7 5.0255 -4.5393 1.5308 17 14 3.2459 -6.3953 0.4992 18 1 3.8955 -7.0425 -0.6688 19 1 3.4755 -7.2195 1.7130 20 1 1.7867 -6.2757 0.2508 21 7 2.1405 -1.1586 -0.0055 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8900 0.5138 24 1 -0.3634 0.8899 0.5139 25 1 6.3841 -0.3707 0.0039 26 1 4.0254 3.9970 1.0284 27 1 4.8984 4.1748 -0.5125 28 1 3.1543 3.8191 -0.5136 29 1 5.9070 -3.5174 -0.1992 30 1 5.8839 -1.9413 -1.0259 31 1 6.0392 -2.0148 0.7458 32 1 5.4213 -5.3078 1.9708 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260358495.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:48:45 Heat of formation + Delta-G solvation = 130.628794 kcal Electronic energy + Delta-G solvation = -17867.037036 eV Core-core repulsion = 15058.055403 eV Total energy + Delta-G solvation = -2808.981633 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.113 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -40.95464 -38.08314 -36.63929 -33.18043 -32.11686 -31.31002 -30.46556 -27.57868 -26.80520 -25.94718 -24.71175 -21.74076 -21.02977 -20.11427 -17.98438 -17.07702 -15.98915 -15.91726 -15.31838 -14.72640 -14.05236 -13.90192 -13.59183 -13.39322 -13.20424 -12.74806 -12.33305 -12.26439 -11.84210 -11.70937 -11.44186 -11.33953 -10.96644 -10.76371 -10.55840 -10.48626 -10.23819 -9.61307 -9.23391 -8.49186 -8.09136 -7.98986 -7.12438 -6.65988 -4.10107 1.76965 2.54500 2.87066 3.06567 3.10824 3.15480 3.24685 3.85744 4.37229 4.61572 4.82673 4.98438 5.02516 5.50679 5.53908 5.60339 5.73729 5.80777 6.04592 6.05993 6.11755 6.15175 6.27425 6.36047 6.42429 6.79230 6.99716 7.16599 7.31134 7.51080 7.81343 8.15055 8.26235 8.49883 8.93853 9.18251 9.60771 10.34359 Molecular weight = 247.11amu Principal moments of inertia in cm(-1) A = 0.028508 B = 0.007630 C = 0.006164 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 981.952999 B = 3668.727132 C = 4541.199179 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.394 3.606 3 N -0.630 5.630 4 C 0.376 3.624 5 C -0.349 4.349 6 C 0.101 3.899 7 N -0.303 5.303 8 N -0.398 5.398 9 C 0.122 3.878 10 C 0.433 3.567 11 N -0.376 5.376 12 C 0.100 3.900 13 C -0.300 4.300 14 H 0.112 0.888 15 C 0.033 3.967 16 N -0.857 5.857 17 Si 0.933 3.067 18 H -0.274 1.274 19 H -0.281 1.281 20 H -0.264 1.264 21 N -0.600 5.600 22 H 0.075 0.925 23 H 0.080 0.920 24 H 0.074 0.926 25 H 0.187 0.813 26 H 0.060 0.940 27 H 0.078 0.922 28 H 0.082 0.918 29 H 0.094 0.906 30 H 0.040 0.960 31 H 0.056 0.944 32 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.296 5.777 -2.716 6.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.120 3.880 3 N -0.368 5.368 4 C 0.131 3.869 5 C -0.368 4.368 6 C -0.092 4.092 7 N -0.120 5.120 8 N -0.189 5.189 9 C -0.020 4.020 10 C 0.180 3.820 11 N -0.060 5.060 12 C -0.044 4.044 13 C -0.429 4.429 14 H 0.129 0.871 15 C -0.174 4.174 16 N -0.492 5.492 17 Si 0.759 3.241 18 H -0.200 1.200 19 H -0.207 1.207 20 H -0.188 1.188 21 N -0.332 5.332 22 H 0.093 0.907 23 H 0.098 0.902 24 H 0.093 0.907 25 H 0.203 0.797 26 H 0.079 0.921 27 H 0.096 0.904 28 H 0.101 0.899 29 H 0.113 0.887 30 H 0.058 0.942 31 H 0.074 0.926 32 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -1.036 6.514 -2.586 7.085 hybrid contribution 0.259 -1.378 0.093 1.405 sum -0.777 5.136 -2.493 5.762 Atomic orbital electron populations 1.20379 0.87114 1.02990 1.02722 1.22433 0.96440 0.82190 0.86907 1.67194 1.05094 1.30302 1.34173 1.18798 0.89186 0.86799 0.92146 1.19338 0.94686 0.94956 1.27845 1.23846 0.95861 0.92602 0.96851 1.76822 0.99453 1.09318 1.26439 1.47941 1.01502 1.04753 1.64751 1.21555 1.01992 0.76210 1.02238 1.18014 0.87708 0.84271 0.91988 1.42578 1.05493 1.02214 1.55764 1.21928 0.79850 1.04167 0.98442 1.19954 1.01056 0.86720 1.35213 0.87055 1.25581 0.96788 1.01125 0.93901 1.70049 1.22234 1.32134 1.24733 0.85800 0.79983 0.80336 0.78004 1.19955 1.20679 1.18781 1.67745 1.07390 1.28267 1.29813 0.90654 0.90158 0.90707 0.79685 0.92094 0.90352 0.89898 0.88703 0.94195 0.92586 0.91429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.17 10.29 36.00 0.37 -0.80 16 2 C 0.39 8.52 7.63 -157.17 -1.20 7.32 16 3 N -0.63 -13.85 10.35 -10.11 -0.10 -13.96 16 4 C 0.38 8.45 8.05 -156.22 -1.26 7.19 16 5 C -0.35 -8.07 5.88 -106.79 -0.63 -8.70 16 6 C 0.10 2.06 10.38 -17.13 -0.18 1.88 16 7 N -0.30 -6.11 12.45 30.79 0.38 -5.73 16 8 N -0.40 -7.89 4.05 -67.23 -0.27 -8.17 16 9 C 0.12 1.75 11.47 59.85 0.69 2.44 16 10 C 0.43 10.70 7.37 -154.80 -1.14 9.56 16 11 N -0.38 -9.25 3.05 -122.02 -0.37 -9.62 16 12 C 0.10 2.11 7.53 59.85 0.45 2.56 16 13 C -0.30 -7.64 9.14 -15.06 -0.14 -7.77 16 14 H 0.11 2.90 7.55 -52.49 -0.40 2.51 16 15 C 0.03 0.81 4.83 -17.45 -0.08 0.73 16 16 N -0.86 -21.35 11.42 55.49 0.63 -20.72 16 17 Si 0.93 18.92 29.59 -169.99 -5.03 13.89 16 18 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 19 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 20 H -0.26 -5.34 7.11 56.52 0.40 -4.94 16 21 N -0.60 -14.59 9.33 -9.76 -0.09 -14.68 16 22 H 0.07 1.07 8.14 -51.93 -0.42 0.65 16 23 H 0.08 1.24 8.14 -51.93 -0.42 0.81 16 24 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 25 H 0.19 3.24 5.37 -52.49 -0.28 2.96 16 26 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 27 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 28 H 0.08 1.11 8.14 -51.93 -0.42 0.69 16 29 H 0.09 2.07 6.17 -51.93 -0.32 1.75 16 30 H 0.04 0.74 7.04 -51.93 -0.37 0.38 16 31 H 0.06 1.16 6.81 -51.92 -0.35 0.81 16 32 H 0.28 6.44 8.31 -40.82 -0.34 6.10 16 LS Contribution 274.23 15.07 4.13 4.13 Total: -1.00 -30.30 274.23 -7.23 -37.53 By element: Atomic # 1 Polarization: 6.31 SS G_CDS: -3.39 Total: 2.92 kcal Atomic # 6 Polarization: 17.52 SS G_CDS: -3.12 Total: 14.40 kcal Atomic # 7 Polarization: -73.05 SS G_CDS: 0.18 Total: -72.87 kcal Atomic # 14 Polarization: 18.92 SS G_CDS: -5.03 Total: 13.89 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -30.30 -7.23 -37.53 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260358495.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.159 kcal (2) G-P(sol) polarization free energy of solvation -30.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 137.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.530 kcal (6) G-S(sol) free energy of system = (1) + (5) 130.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds