Wall clock time and date at job start Mon Mar 30 2020 04:08:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.36957 * 119.99746 * 2 1 4 4 H 1.08003 * 119.99882 * 162.20814 * 3 2 1 5 5 C 1.38803 * 120.00227 * 342.21320 * 3 2 1 6 6 N 1.31554 * 119.99820 * 344.85442 * 5 3 2 7 7 Si 1.86807 * 119.99900 * 164.84980 * 5 3 2 8 8 H 1.48497 * 109.47078 * 0.02562 * 7 5 3 9 9 H 1.48503 * 109.46963 * 120.00197 * 7 5 3 10 10 H 1.48500 * 109.46937 * 240.00051 * 7 5 3 11 11 C 1.37834 * 120.00067 * 180.02562 * 2 1 3 12 12 N 1.31056 * 125.08569 * 187.19982 * 11 2 1 13 13 C 1.35698 * 109.65177 * 180.02562 * 12 11 2 14 14 C 1.39882 * 133.36693 * 180.02562 * 13 12 11 15 15 C 1.37615 * 119.81439 * 180.25363 * 14 13 12 16 16 C 1.38764 * 120.52889 * 359.48154 * 15 14 13 17 17 C 1.38133 * 120.42378 * 0.50257 * 16 15 14 18 18 F 1.35095 * 120.09012 * 179.73795 * 17 16 15 19 19 C 1.38878 * 119.81616 * 359.76113 * 17 16 15 20 20 N 1.36634 * 125.08588 * 7.22834 * 11 2 1 21 21 C 1.46499 * 126.39735 * 0.02562 * 20 11 2 22 22 H 1.08999 * 109.46824 * 203.83388 * 1 2 3 23 23 H 1.08997 * 109.47397 * 323.83424 * 1 2 3 24 24 H 1.09000 * 109.47000 * 83.83555 * 1 2 3 25 25 H 0.96998 * 119.99369 * 180.02562 * 6 5 3 26 26 H 1.07993 * 120.09251 * 359.97438 * 14 13 12 27 27 H 1.07993 * 119.73207 * 179.70092 * 15 14 13 28 28 H 1.08002 * 119.78335 * 180.23752 * 16 15 14 29 29 H 1.08998 * 109.47073 * 275.00687 * 21 20 11 30 30 H 1.09005 * 109.47246 * 35.00914 * 21 20 11 31 31 H 1.08999 * 109.47073 * 155.00880 * 21 20 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1498 1.1861 0.0000 4 1 3.1910 1.2085 0.2858 5 6 1.5055 2.3595 -0.3672 6 7 0.3493 2.3070 -0.9926 7 14 2.2802 4.0130 0.0269 8 1 3.5713 3.8001 0.7289 9 1 2.5201 4.7602 -1.2339 10 1 1.3651 4.7932 0.8982 11 6 2.1542 -1.1937 -0.0005 12 7 3.4523 -1.3141 0.1338 13 6 3.7961 -2.6260 0.0874 14 6 5.0169 -3.3028 0.1781 15 6 5.0465 -4.6757 0.0879 16 6 3.8729 -5.3964 -0.0818 17 6 2.6586 -4.7443 -0.1729 18 9 1.5207 -5.4523 -0.3434 19 6 2.6108 -3.3589 -0.0894 20 7 1.5863 -2.4284 -0.1418 21 6 0.1603 -2.7144 -0.3172 22 1 -0.3633 -0.9400 0.4153 23 1 -0.3634 0.8296 0.6064 24 1 -0.3633 0.1104 -1.0217 25 1 -0.1007 3.1270 -1.2495 26 1 5.9342 -2.7492 0.3140 27 1 5.9903 -5.1965 0.1533 28 1 3.9097 -6.4738 -0.1472 29 1 -0.3234 -2.7622 0.6584 30 1 -0.2983 -1.9243 -0.9118 31 1 0.0416 -3.6695 -0.8288 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260437582.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:08:44 Heat of formation + Delta-G solvation = 63.572164 kcal Electronic energy + Delta-G solvation = -18013.360391 eV Core-core repulsion = 15018.406429 eV Total energy + Delta-G solvation = -2994.953962 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 249.097 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.43176 -41.15531 -37.25266 -35.49883 -33.41930 -31.85546 -29.53859 -28.26969 -26.91946 -26.09874 -24.19931 -21.77275 -21.20776 -19.88866 -17.63228 -16.82242 -16.49388 -16.03134 -15.69319 -15.13042 -14.76171 -14.71446 -14.33596 -13.71063 -13.27741 -13.02736 -12.87061 -12.67062 -12.56338 -11.59579 -11.33093 -11.25080 -11.15178 -10.96525 -10.69035 -10.42819 -10.33417 -9.61176 -9.34205 -8.91013 -8.52879 -7.45607 -6.87939 -6.47351 -3.89925 1.57463 2.03862 3.05671 3.07969 3.18923 3.28940 3.65076 3.99017 4.45120 4.49538 4.78227 4.94661 5.08379 5.17516 5.37630 5.53310 5.72366 5.77026 5.89006 5.96267 6.11634 6.33103 6.51932 6.59298 6.88524 6.94022 7.00689 7.17799 7.24018 7.41159 7.54937 8.06245 8.36946 8.86624 9.14389 9.47620 10.52039 Molecular weight = 249.10amu Principal moments of inertia in cm(-1) A = 0.035155 B = 0.006706 C = 0.005701 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 796.270961 B = 4174.131216 C = 4910.589424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.108 3.892 2 N -0.416 5.416 3 C -0.284 4.284 4 H 0.112 0.888 5 C 0.024 3.976 6 N -0.883 5.883 7 Si 0.936 3.064 8 H -0.265 1.265 9 H -0.280 1.280 10 H -0.280 1.280 11 C 0.526 3.474 12 N -0.570 5.570 13 C 0.141 3.859 14 C -0.124 4.124 15 C -0.094 4.094 16 C -0.194 4.194 17 C 0.110 3.890 18 F -0.154 7.154 19 C -0.013 4.013 20 N -0.530 5.530 21 C 0.080 3.920 22 H 0.039 0.961 23 H 0.075 0.925 24 H 0.065 0.935 25 H 0.270 0.730 26 H 0.124 0.876 27 H 0.124 0.876 28 H 0.126 0.874 29 H 0.061 0.939 30 H 0.091 0.909 31 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.498 -8.739 1.477 8.877 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.116 5.116 3 C -0.413 4.413 4 H 0.130 0.870 5 C -0.180 4.180 6 N -0.521 5.521 7 Si 0.762 3.238 8 H -0.189 1.189 9 H -0.206 1.206 10 H -0.205 1.205 11 C 0.176 3.824 12 N -0.304 5.304 13 C 0.016 3.984 14 C -0.146 4.146 15 C -0.115 4.115 16 C -0.216 4.216 17 C 0.087 3.913 18 F -0.133 7.133 19 C -0.121 4.121 20 N -0.232 5.232 21 C -0.063 4.063 22 H 0.057 0.943 23 H 0.093 0.907 24 H 0.084 0.916 25 H 0.080 0.920 26 H 0.142 0.858 27 H 0.142 0.858 28 H 0.144 0.856 29 H 0.079 0.921 30 H 0.109 0.891 31 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 0.500 -7.669 1.477 7.826 hybrid contribution -0.836 0.061 -0.103 0.845 sum -0.336 -7.608 1.374 7.738 Atomic orbital electron populations 1.22077 0.79097 0.99564 1.02743 1.41730 1.04325 0.99743 1.65810 1.19874 0.97699 0.81184 1.42531 0.87041 1.25376 0.96758 1.00186 0.95696 1.70097 1.16459 1.29036 1.36516 0.85687 0.79287 0.80475 0.78321 1.18882 1.20623 1.20548 1.20000 0.86592 0.80205 0.95612 1.70850 1.07607 1.14970 1.36934 1.18962 0.91856 0.89479 0.98114 1.20033 0.95262 0.93184 1.06151 1.20431 0.96967 0.93085 1.01001 1.20397 0.90495 0.99501 1.11201 1.16506 0.82392 0.85070 1.07333 1.91381 1.49633 1.78723 1.93555 1.18519 0.90390 0.89770 1.13383 1.44757 1.06163 1.04708 1.67599 1.22178 0.79192 1.03041 1.01893 0.94263 0.90658 0.91637 0.92019 0.85824 0.85759 0.85646 0.92077 0.89110 0.90563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.32 7.30 59.85 0.44 2.76 16 2 N -0.42 -10.33 3.10 -123.89 -0.38 -10.72 16 3 C -0.28 -7.50 9.51 -15.05 -0.14 -7.64 16 4 H 0.11 3.04 7.49 -52.48 -0.39 2.65 16 5 C 0.02 0.59 5.08 -17.46 -0.09 0.50 16 6 N -0.88 -22.40 10.52 55.49 0.58 -21.81 16 7 Si 0.94 19.87 29.58 -169.99 -5.03 14.84 16 8 H -0.26 -5.62 7.11 56.52 0.40 -5.21 16 9 H -0.28 -5.95 7.11 56.52 0.40 -5.55 16 10 H -0.28 -5.82 7.11 56.52 0.40 -5.42 16 11 C 0.53 12.81 8.15 -319.90 -2.61 10.20 16 12 N -0.57 -14.26 10.58 -11.49 -0.12 -14.38 16 13 C 0.14 3.10 7.22 -84.70 -0.61 2.49 16 14 C -0.12 -2.23 10.10 -39.19 -0.40 -2.63 16 15 C -0.09 -1.42 10.01 -39.61 -0.40 -1.82 16 16 C -0.19 -3.04 10.01 -39.43 -0.39 -3.44 16 17 C 0.11 2.02 7.31 -39.38 -0.29 1.73 16 18 F -0.15 -2.69 15.94 2.25 0.04 -2.66 16 19 C -0.01 -0.27 6.88 -83.77 -0.58 -0.84 16 20 N -0.53 -11.28 3.23 -122.37 -0.40 -11.67 16 21 C 0.08 1.33 9.07 59.85 0.54 1.88 16 22 H 0.04 0.71 4.41 -51.93 -0.23 0.48 16 23 H 0.07 1.69 7.11 -51.93 -0.37 1.32 16 24 H 0.07 1.46 7.12 -51.93 -0.37 1.09 16 25 H 0.27 6.47 8.31 -40.82 -0.34 6.13 16 26 H 0.12 2.02 8.06 -52.49 -0.42 1.60 16 27 H 0.12 1.42 8.06 -52.49 -0.42 1.00 16 28 H 0.13 1.61 8.06 -52.49 -0.42 1.19 16 29 H 0.06 0.92 7.56 -51.93 -0.39 0.53 16 30 H 0.09 1.48 5.55 -51.93 -0.29 1.20 16 31 H 0.08 1.17 6.95 -51.93 -0.36 0.81 16 LS Contribution 263.57 15.07 3.97 3.97 Total: -1.00 -28.78 263.57 -8.67 -37.45 By element: Atomic # 1 Polarization: 4.60 SS G_CDS: -2.81 Total: 1.79 kcal Atomic # 6 Polarization: 7.71 SS G_CDS: -4.52 Total: 3.19 kcal Atomic # 7 Polarization: -58.27 SS G_CDS: -0.32 Total: -58.59 kcal Atomic # 9 Polarization: -2.69 SS G_CDS: 0.04 Total: -2.66 kcal Atomic # 14 Polarization: 19.87 SS G_CDS: -5.03 Total: 14.84 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -28.78 -8.67 -37.45 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260437582.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.020 kcal (2) G-P(sol) polarization free energy of solvation -28.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.448 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds