Wall clock time and date at job start Mon Mar 30 2020 04:27:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37705 * 120.03028 * 2 1 4 4 C 1.38747 * 120.34486 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 119.78961 * 179.97438 * 4 3 2 6 6 C 1.38152 * 120.41630 * 359.97438 * 4 3 2 7 7 C 1.38836 * 120.05808 * 0.02562 * 6 4 3 8 8 N 1.38859 * 120.17212 * 180.02562 * 7 6 4 9 9 C 1.39820 * 120.03639 * 180.02562 * 2 1 3 10 10 C 1.47177 * 120.20657 * 359.97438 * 9 2 1 11 11 O 1.21565 * 119.99760 * 89.99513 * 10 9 2 12 12 O 1.34797 * 120.00575 * 270.00488 * 10 9 2 13 13 C 1.34860 * 117.00342 * 179.97438 * 12 10 9 14 14 H 1.08002 * 120.00409 * 359.97438 * 13 12 10 15 15 C 1.38791 * 119.99887 * 179.97438 * 13 12 10 16 16 N 1.31432 * 120.00047 * 0.02562 * 15 13 12 17 17 Si 1.86806 * 120.00000 * 179.97438 * 15 13 12 18 18 H 1.48499 * 109.46717 * 89.99723 * 17 15 13 19 19 H 1.48493 * 109.46988 * 210.00058 * 17 15 13 20 20 H 1.48492 * 109.46891 * 330.00190 * 17 15 13 21 21 H 1.08994 * 109.47028 * 90.00400 * 1 2 3 22 22 H 1.09000 * 109.46861 * 210.00233 * 1 2 3 23 23 H 1.08997 * 109.47710 * 330.00172 * 1 2 3 24 24 H 1.07994 * 119.82464 * 359.74420 * 3 2 1 25 25 H 1.07995 * 119.97173 * 179.97438 * 6 4 3 26 26 H 0.97001 * 119.99835 * 179.97438 * 8 7 6 27 27 H 0.96994 * 119.99637 * 359.97438 * 8 7 6 28 28 H 0.97007 * 119.99838 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1962 1.1922 0.0000 4 6 3.5836 1.1998 -0.0005 5 17 4.4378 2.7111 -0.0012 6 6 4.2896 0.0123 -0.0005 7 6 3.6120 -1.1995 -0.0005 8 7 4.3192 -2.3945 0.0000 9 6 2.2069 -1.2104 -0.0005 10 6 1.4764 -2.4881 -0.0005 11 8 1.1743 -3.0155 -1.0534 12 8 1.1422 -3.0736 1.1668 13 6 0.4733 -4.2424 1.0961 14 1 0.2289 -4.6676 0.1338 15 6 0.0989 -4.8992 2.2601 16 7 0.3958 -4.3816 3.4312 17 14 -0.8283 -6.5179 2.1623 18 1 0.1410 -7.6426 2.1345 19 1 -1.7116 -6.6548 3.3481 20 1 -1.6511 -6.5431 0.9265 21 1 -0.3633 -0.0001 -1.0276 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3634 0.8899 0.5138 24 1 1.6538 2.1261 -0.0042 25 1 5.3694 0.0266 -0.0014 26 1 3.8433 -3.2397 0.0004 27 1 5.2891 -2.3840 0.0000 28 1 0.1345 -4.8409 4.2447 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000389619929.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:27:56 Heat of formation + Delta-G solvation = -70.857310 kcal Electronic energy + Delta-G solvation = -16356.250999 eV Core-core repulsion = 13397.910738 eV Total energy + Delta-G solvation = -2958.340262 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 255.045 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.88163 -38.30451 -36.46633 -35.09813 -34.76664 -32.23820 -31.79296 -29.00416 -26.90052 -25.51271 -23.21446 -21.28109 -20.15740 -17.79224 -17.27494 -16.95223 -16.53971 -15.33092 -14.75683 -14.46454 -14.44449 -13.83905 -13.74180 -13.30295 -12.73039 -12.60866 -12.15892 -11.84335 -11.74003 -11.46074 -11.44447 -11.18556 -10.81570 -10.49452 -10.44602 -10.04792 -9.90738 -9.17295 -8.64036 -8.39051 -7.39269 -6.47026 -4.15640 1.28457 1.70916 2.19848 3.03504 3.15094 3.20924 3.37701 3.74566 3.97068 4.04636 4.55490 4.92593 5.07041 5.31530 5.44529 5.55286 5.81901 5.91364 5.98686 6.05920 6.37021 6.44725 6.60254 6.76630 6.93701 7.32849 7.57952 7.85777 7.91230 8.60153 9.00754 9.78358 10.69901 Molecular weight = 255.04amu Principal moments of inertia in cm(-1) A = 0.037107 B = 0.005431 C = 0.005248 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 754.392275 B = 5154.246960 C = 5334.405673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C 0.011 3.989 3 C -0.178 4.178 4 C 0.028 3.972 5 Cl -0.080 7.080 6 C -0.205 4.205 7 C 0.268 3.732 8 N -0.859 5.859 9 C -0.151 4.151 10 C 0.444 3.556 11 O -0.545 6.545 12 O -0.203 6.203 13 C -0.388 4.388 14 H 0.096 0.904 15 C 0.045 3.955 16 N -0.859 5.859 17 Si 0.942 3.058 18 H -0.273 1.273 19 H -0.277 1.277 20 H -0.266 1.266 21 H 0.077 0.923 22 H 0.079 0.921 23 H 0.072 0.928 24 H 0.132 0.868 25 H 0.133 0.867 26 H 0.408 0.592 27 H 0.400 0.600 28 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.000 8.982 -4.141 11.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.010 3.990 3 C -0.198 4.198 4 C 0.000 4.000 5 Cl -0.051 7.051 6 C -0.229 4.229 7 C 0.159 3.841 8 N -0.396 5.396 9 C -0.158 4.158 10 C 0.291 3.709 11 O -0.442 6.442 12 O -0.110 6.110 13 C -0.464 4.464 14 H 0.114 0.886 15 C -0.160 4.160 16 N -0.495 5.495 17 Si 0.767 3.233 18 H -0.199 1.199 19 H -0.203 1.203 20 H -0.190 1.190 21 H 0.096 0.904 22 H 0.098 0.902 23 H 0.091 0.909 24 H 0.150 0.850 25 H 0.150 0.850 26 H 0.239 0.761 27 H 0.228 0.772 28 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 5.946 8.919 -4.152 11.496 hybrid contribution -0.047 -0.967 0.050 0.969 sum 5.899 7.953 -4.102 10.718 Atomic orbital electron populations 1.20907 0.90152 1.03871 1.02927 1.19574 0.96184 0.90338 0.92895 1.20453 0.91504 0.98016 1.09858 1.20560 0.92051 0.85904 1.01445 1.98342 1.77734 1.32133 1.96867 1.20155 0.99669 0.89215 1.13866 1.17358 0.89449 0.86635 0.90627 1.42353 1.08962 1.05703 1.82587 1.18752 0.91216 0.92586 1.13230 1.20520 0.81453 0.85296 0.83674 1.90683 1.55376 1.65015 1.33151 1.84077 1.61713 1.34805 1.30382 1.21267 1.34285 0.95896 0.94955 0.88597 1.25356 0.97144 0.99475 0.94044 1.70002 1.43468 1.38590 0.97436 0.85694 0.79142 0.80141 0.78369 1.19858 1.20262 1.19020 0.90450 0.90190 0.90890 0.84991 0.84953 0.76148 0.77194 0.91961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.03 9.62 36.01 0.35 -1.69 15 2 C 0.01 0.21 5.91 -104.22 -0.62 -0.41 15 3 C -0.18 -2.72 9.45 -39.59 -0.37 -3.09 15 4 C 0.03 0.41 6.32 -39.42 -0.25 0.16 15 5 Cl -0.08 -0.99 28.94 -51.86 -1.50 -2.49 15 6 C -0.21 -3.09 9.65 -39.39 -0.38 -3.47 15 7 C 0.27 4.75 6.77 -83.60 -0.57 4.18 15 8 N -0.86 -13.51 8.99 32.55 0.29 -13.22 15 9 C -0.15 -3.13 5.77 -104.82 -0.60 -3.73 15 10 C 0.44 11.04 4.54 34.36 0.16 11.20 15 11 O -0.54 -14.66 16.36 -19.32 -0.32 -14.98 15 12 O -0.20 -5.73 9.75 -21.83 -0.21 -5.94 15 13 C -0.39 -11.17 9.65 30.94 0.30 -10.87 15 14 H 0.10 2.77 6.86 -52.49 -0.36 2.41 15 15 C 0.04 1.23 5.50 -17.52 -0.10 1.14 15 16 N -0.86 -24.69 13.67 55.49 0.76 -23.93 15 17 Si 0.94 20.77 29.55 -169.99 -5.02 15.75 15 18 H -0.27 -5.84 7.11 56.52 0.40 -5.44 15 19 H -0.28 -5.91 7.11 56.52 0.40 -5.51 15 20 H -0.27 -5.77 7.11 56.52 0.40 -5.37 15 21 H 0.08 1.19 8.14 -51.93 -0.42 0.77 15 22 H 0.08 1.58 7.09 -51.93 -0.37 1.21 15 23 H 0.07 0.98 8.08 -51.93 -0.42 0.56 15 24 H 0.13 1.69 8.06 -52.49 -0.42 1.26 15 25 H 0.13 1.63 8.06 -52.49 -0.42 1.21 15 26 H 0.41 7.23 7.68 -40.82 -0.31 6.92 15 27 H 0.40 4.68 8.83 -40.82 -0.36 4.32 15 28 H 0.27 7.13 8.31 -40.82 -0.34 6.79 15 LS Contribution 272.85 15.07 4.11 4.11 Total: -1.00 -31.95 272.85 -6.20 -38.15 By element: Atomic # 1 Polarization: 11.37 SS G_CDS: -2.22 Total: 9.14 kcal Atomic # 6 Polarization: -4.50 SS G_CDS: -2.09 Total: -6.59 kcal Atomic # 7 Polarization: -38.19 SS G_CDS: 1.05 Total: -37.14 kcal Atomic # 8 Polarization: -20.39 SS G_CDS: -0.53 Total: -20.92 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.50 Total: -2.49 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -31.95 -6.20 -38.15 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000389619929.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.710 kcal (2) G-P(sol) polarization free energy of solvation -31.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.147 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds