Wall clock time and date at job start Mon Mar 30 2020 04:16:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31517 * 1 3 3 Si 1.86803 * 120.00059 * 2 1 4 4 H 1.48498 * 109.47297 * 270.00123 * 3 2 1 5 5 H 1.48504 * 109.47006 * 30.00294 * 3 2 1 6 6 H 1.48499 * 109.46996 * 149.99862 * 3 2 1 7 7 C 1.37875 * 119.99857 * 180.02562 * 2 1 3 8 8 H 1.08003 * 119.99701 * 185.73292 * 7 2 1 9 9 C 1.50701 * 120.00221 * 5.72539 * 7 2 1 10 10 H 1.08999 * 109.46914 * 335.07474 * 9 7 2 11 11 C 1.52997 * 109.47168 * 215.07123 * 9 7 2 12 12 N 1.46907 * 109.47103 * 65.30295 * 11 9 7 13 13 C 1.50695 * 109.46797 * 95.06833 * 9 7 2 14 14 N 1.34055 * 125.98397 * 59.98186 * 13 9 7 15 15 C 1.30883 * 109.31493 * 179.97438 * 14 13 9 16 16 N 1.34939 * 108.61841 * 0.18595 * 15 14 13 17 17 C 1.34690 * 125.99181 * 240.01362 * 13 9 7 18 18 Cl 1.73605 * 126.58608 * 359.94691 * 17 13 9 19 19 C 1.47004 * 111.16079 * 179.70256 * 16 15 14 20 20 C 1.54372 * 105.53860 * 17.10843 * 19 16 15 21 21 C 1.51559 * 141.45791 * 180.15662 * 15 14 13 22 22 H 0.97007 * 120.00031 * 0.02562 * 1 2 3 23 23 H 1.08997 * 109.46864 * 185.30026 * 11 9 7 24 24 H 1.08995 * 109.47297 * 305.30058 * 11 9 7 25 25 H 1.00900 * 111.00079 * 56.03990 * 12 11 9 26 26 H 1.00896 * 110.99553 * 180.02562 * 12 11 9 27 27 H 1.09001 * 110.23622 * 136.14745 * 19 16 15 28 28 H 1.09000 * 110.23297 * 258.11202 * 19 16 15 29 29 H 1.09002 * 110.97769 * 216.14362 * 20 19 16 30 30 H 1.09000 * 110.95565 * 92.39458 * 20 19 16 31 31 H 1.09001 * 110.47561 * 282.18037 * 21 15 14 32 32 H 1.09000 * 110.47766 * 44.79362 * 21 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2492 1.6178 0.0000 4 1 2.4967 2.0465 -1.4000 5 1 1.4466 2.6527 0.7001 6 1 3.5467 1.4402 0.7001 7 6 2.0045 -1.1940 -0.0005 8 1 3.0805 -1.1964 0.0929 9 6 1.2567 -2.4959 -0.1313 10 1 0.2339 -2.3643 0.2218 11 6 1.9518 -3.5699 0.7077 12 7 1.8583 -3.2165 2.1306 13 6 1.2381 -2.9214 -1.5768 14 7 2.3128 -3.1739 -2.3374 15 6 1.9220 -3.5181 -3.5382 16 7 0.5735 -3.4900 -3.5770 17 6 0.1391 -3.1141 -2.3312 18 17 -1.5103 -2.9217 -1.8248 19 6 0.0731 -3.8622 -4.9082 20 6 1.2561 -4.5579 -5.6151 21 6 2.4691 -3.9338 -4.8891 22 1 -0.4850 0.8401 -0.0004 23 1 1.4677 -4.5319 0.5398 24 1 3.0005 -3.6353 0.4178 25 1 0.8971 -3.0865 2.4085 26 1 2.3108 -3.9108 2.7060 27 1 -0.7683 -4.5490 -4.8163 28 1 -0.2252 -2.9716 -5.4614 29 1 1.2716 -4.3172 -6.6781 30 1 1.2223 -5.6365 -5.4614 31 1 2.8352 -3.0649 -5.4360 32 1 3.2623 -4.6716 -4.7687 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261049921.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:16:54 Heat of formation + Delta-G solvation = 63.028495 kcal Electronic energy + Delta-G solvation = -17059.083279 eV Core-core repulsion = 14274.674587 eV Total energy + Delta-G solvation = -2784.408692 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 255.083 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.76768 -36.52441 -35.72681 -34.49049 -32.05872 -31.23290 -29.43026 -26.93804 -26.37203 -23.99066 -21.87274 -20.83524 -19.57300 -18.94907 -16.69583 -16.12089 -15.91122 -14.74605 -14.39495 -14.00414 -13.76314 -13.46818 -13.19235 -12.93131 -12.67853 -12.19421 -11.90745 -11.59624 -11.47147 -11.14920 -10.76420 -10.71654 -10.62491 -10.50488 -10.28422 -9.47668 -9.18651 -8.76618 -8.67348 -8.25892 -7.53518 -7.19598 -5.79425 -3.75146 2.47031 2.61208 3.43342 3.47515 3.51697 3.58069 3.95619 4.15708 4.59924 4.65113 4.70013 4.89908 5.31924 5.47001 5.48232 5.53857 5.74099 5.78261 5.91686 6.11048 6.42540 6.45390 6.78524 6.84247 7.15441 7.43981 7.69646 7.92642 8.14041 8.23826 8.47509 8.60263 8.92928 9.27443 9.82500 11.28919 Molecular weight = 255.08amu Principal moments of inertia in cm(-1) A = 0.019523 B = 0.008188 C = 0.007913 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1433.885095 B = 3418.701827 C = 3537.681547 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.888 5.888 2 C 0.062 3.938 3 Si 0.888 3.112 4 H -0.287 1.287 5 H -0.290 1.290 6 H -0.274 1.274 7 C -0.462 4.462 8 H 0.056 0.944 9 C 0.104 3.896 10 H 0.080 0.920 11 C 0.085 3.915 12 N -0.830 5.830 13 C 0.106 3.894 14 N -0.458 5.458 15 C 0.175 3.825 16 N -0.489 5.489 17 C 0.011 3.989 18 Cl -0.019 7.019 19 C 0.105 3.895 20 C -0.127 4.127 21 C -0.034 4.034 22 H 0.256 0.744 23 H -0.011 1.011 24 H 0.060 0.940 25 H 0.334 0.666 26 H 0.318 0.682 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.096 0.904 30 H 0.084 0.916 31 H 0.091 0.909 32 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.262 -9.979 -10.038 14.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.526 5.526 2 C -0.139 4.139 3 Si 0.717 3.283 4 H -0.213 1.213 5 H -0.216 1.216 6 H -0.199 1.199 7 C -0.501 4.501 8 H 0.075 0.925 9 C 0.084 3.916 10 H 0.098 0.902 11 C -0.046 4.046 12 N -0.358 5.358 13 C -0.026 4.026 14 N -0.179 5.179 15 C -0.086 4.086 16 N -0.179 5.179 17 C -0.124 4.124 18 Cl 0.009 6.991 19 C -0.017 4.017 20 C -0.166 4.166 21 C -0.074 4.074 22 H 0.066 0.934 23 H 0.008 0.992 24 H 0.079 0.921 25 H 0.146 0.854 26 H 0.129 0.871 27 H 0.101 0.899 28 H 0.100 0.900 29 H 0.115 0.885 30 H 0.103 0.897 31 H 0.110 0.890 32 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.591 -9.127 -9.973 13.532 hybrid contribution -1.309 0.219 -0.418 1.392 sum -1.901 -8.908 -10.391 13.818 Atomic orbital electron populations 1.69935 1.05576 1.26006 1.51113 1.24932 0.94831 0.98870 0.95249 0.86653 0.80154 0.83910 0.77582 1.21342 1.21630 1.19852 1.20730 0.93212 0.88974 1.47163 0.92540 1.17548 0.99570 0.92848 0.81645 0.90232 1.21750 1.00265 0.94459 0.88131 1.58477 1.21639 1.51816 1.03866 1.21845 0.83886 0.97462 0.99374 1.69991 1.30735 1.17630 0.99508 1.24126 0.81244 1.06635 0.96643 1.46062 1.09874 1.53398 1.08578 1.21340 0.88100 1.17718 0.85212 1.98320 1.15369 1.96548 1.88904 1.22219 0.98181 1.00351 0.80980 1.22687 0.93010 1.00791 1.00069 1.20531 0.97648 1.01425 0.87751 0.93426 0.99247 0.92109 0.85372 0.87144 0.89911 0.89981 0.88545 0.89747 0.89040 0.88832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -25.89 12.77 55.43 0.71 -25.18 16 2 C 0.06 1.79 5.45 -17.82 -0.10 1.70 16 3 Si 0.89 22.77 29.54 -169.99 -5.02 17.75 16 4 H -0.29 -7.40 7.11 56.52 0.40 -7.00 16 5 H -0.29 -7.33 7.11 56.52 0.40 -6.93 16 6 H -0.27 -6.98 7.11 56.52 0.40 -6.58 16 7 C -0.46 -13.28 8.02 -34.44 -0.28 -13.56 16 8 H 0.06 1.69 7.82 -52.48 -0.41 1.28 16 9 C 0.10 2.69 2.47 -92.93 -0.23 2.46 16 10 H 0.08 2.19 6.49 -51.93 -0.34 1.86 16 11 C 0.08 1.94 6.14 -3.82 -0.02 1.92 16 12 N -0.83 -17.26 9.35 -10.37 -0.10 -17.36 16 13 C 0.11 2.63 5.58 -82.88 -0.46 2.17 16 14 N -0.46 -10.87 11.26 -6.76 -0.08 -10.95 16 15 C 0.17 3.35 8.58 -154.77 -1.33 2.02 16 16 N -0.49 -9.14 3.61 -108.82 -0.39 -9.53 16 17 C 0.01 0.25 7.85 -16.41 -0.13 0.12 16 18 Cl -0.02 -0.41 28.55 -51.86 -1.48 -1.89 16 19 C 0.10 1.31 7.78 -3.05 -0.02 1.28 16 20 C -0.13 -1.15 7.17 -25.21 -0.18 -1.33 16 21 C -0.03 -0.42 6.86 -26.66 -0.18 -0.60 16 22 H 0.26 7.24 8.31 -40.82 -0.34 6.90 16 23 H -0.01 -0.23 8.14 -51.93 -0.42 -0.65 16 24 H 0.06 1.45 8.14 -51.93 -0.42 1.02 16 25 H 0.33 6.75 8.99 -39.29 -0.35 6.40 16 26 H 0.32 5.47 9.08 -39.29 -0.36 5.11 16 27 H 0.08 0.91 8.14 -51.93 -0.42 0.49 16 28 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 29 H 0.10 0.58 8.14 -51.93 -0.42 0.16 16 30 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 31 H 0.09 1.02 8.14 -51.93 -0.42 0.60 16 32 H 0.09 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 288.13 15.07 4.34 4.34 Total: -1.00 -33.69 288.13 -8.93 -42.62 By element: Atomic # 1 Polarization: 7.99 SS G_CDS: -3.97 Total: 4.01 kcal Atomic # 6 Polarization: -0.88 SS G_CDS: -2.93 Total: -3.82 kcal Atomic # 7 Polarization: -63.16 SS G_CDS: 0.14 Total: -63.02 kcal Atomic # 14 Polarization: 22.77 SS G_CDS: -5.02 Total: 17.75 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -1.48 Total: -1.89 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -33.69 -8.93 -42.62 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261049921.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.648 kcal (2) G-P(sol) polarization free energy of solvation -33.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.620 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds