Wall clock time and date at job start Mon Mar 30 2020 04:36:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42905 * 109.47264 * 2 1 4 4 C 1.35345 * 117.00329 * 179.97438 * 3 2 1 5 5 N 1.30537 * 125.44033 * 179.97438 * 4 3 2 6 6 C 1.36371 * 108.37935 * 179.97438 * 5 4 3 7 7 C 1.47213 * 126.42288 * 179.97438 * 6 5 4 8 8 O 1.21544 * 120.00117 * 179.97438 * 7 6 5 9 9 O 1.34793 * 120.00043 * 359.97438 * 7 6 5 10 10 C 1.45205 * 117.00062 * 179.97438 * 9 7 6 11 11 H 1.09000 * 109.46634 * 329.99736 * 10 9 7 12 12 C 1.52995 * 109.47009 * 89.99896 * 10 9 7 13 13 C 1.50700 * 109.46971 * 209.99943 * 10 9 7 14 14 H 1.08005 * 119.99956 * 0.02562 * 13 10 9 15 15 C 1.37876 * 120.00090 * 180.02562 * 13 10 9 16 16 N 1.31517 * 119.99545 * 359.97438 * 15 13 10 17 17 Si 1.86791 * 120.00190 * 179.97438 * 15 13 10 18 18 H 1.48501 * 109.47246 * 60.00059 * 17 15 13 19 19 H 1.48500 * 109.47225 * 179.97438 * 17 15 13 20 20 H 1.48498 * 109.47352 * 299.99545 * 17 15 13 21 21 C 1.35996 * 107.15207 * 359.97438 * 6 5 4 22 22 O 1.34216 * 125.43295 * 359.69796 * 4 3 2 23 23 H 1.08992 * 109.47303 * 59.99596 * 1 2 3 24 24 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.46832 * 299.99892 * 1 2 3 26 26 H 1.09001 * 109.47289 * 239.99833 * 2 1 3 27 27 H 1.09004 * 109.47261 * 120.00089 * 2 1 3 28 28 H 1.08998 * 109.47419 * 59.99867 * 12 10 9 29 29 H 1.09000 * 109.47131 * 180.02562 * 12 10 9 30 30 H 1.09006 * 109.47060 * 300.00050 * 12 10 9 31 31 H 0.96998 * 119.99560 * 180.02562 * 16 15 13 32 32 H 1.07999 * 126.46169 * 180.02562 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3481 1.5247 0.0005 5 7 3.9591 2.6782 0.0001 6 6 5.3040 2.4524 0.0015 7 6 6.3622 3.4759 0.0011 8 8 7.5308 3.1419 0.0029 9 8 6.0350 4.7836 -0.0013 10 6 7.1301 5.7371 -0.0010 11 1 7.9877 5.3052 0.5148 12 6 7.5169 6.0698 -1.4434 13 6 6.6998 6.9960 0.7069 14 1 5.7031 7.0716 1.1160 15 6 7.5784 8.0511 0.8322 16 7 8.7922 7.9586 0.3344 17 14 7.0449 9.6117 1.7090 18 1 6.6695 9.2892 3.1092 19 1 8.1648 10.5869 1.7095 20 1 5.8764 10.1997 1.0061 21 6 5.4844 1.1045 0.0033 22 8 4.2628 0.5425 0.0068 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 6.6593 6.5017 -1.9592 29 1 8.3393 6.7853 -1.4432 30 1 7.8282 5.1592 -1.9554 31 1 9.4105 8.7008 0.4229 32 1 6.4304 0.5835 0.0051 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000774087217.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:36:54 Heat of formation + Delta-G solvation = -96.713378 kcal Electronic energy + Delta-G solvation = -18352.723184 eV Core-core repulsion = 15088.385649 eV Total energy + Delta-G solvation = -3264.337535 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 255.098 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -43.45707 -39.41738 -39.01138 -35.75868 -34.92851 -33.18740 -32.24261 -29.83671 -29.30721 -25.31281 -24.83408 -23.83715 -22.55390 -21.28243 -20.04659 -18.77370 -17.66333 -17.23243 -16.58672 -16.40171 -15.82553 -15.47292 -15.03103 -14.85308 -14.43604 -13.60381 -13.23016 -13.13390 -12.94303 -12.24181 -12.12066 -11.91516 -11.60504 -11.24005 -11.03467 -10.90066 -10.78872 -10.63958 -10.35749 -10.25240 -9.98038 -9.52569 -8.88132 -8.72490 -8.44320 -6.13835 -4.19984 1.09250 1.79866 2.11139 2.62123 3.31698 3.33519 3.35440 3.48137 3.52750 4.36276 4.43460 4.43935 4.70833 4.76439 4.84881 5.18997 5.24084 5.32775 5.37618 5.47859 5.61811 5.94209 6.57257 6.65240 6.92660 6.93124 7.12633 7.52232 7.62886 7.74623 7.93462 8.16849 8.60208 8.91260 9.44851 10.93818 Molecular weight = 255.10amu Principal moments of inertia in cm(-1) A = 0.032396 B = 0.004369 C = 0.003979 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 864.094044 B = 6407.122972 C = 7035.152676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.051 3.949 3 O -0.244 6.244 4 C 0.374 3.626 5 N -0.430 5.430 6 C -0.015 4.015 7 C 0.541 3.459 8 O -0.511 6.511 9 O -0.330 6.330 10 C 0.213 3.787 11 H 0.049 0.951 12 C -0.155 4.155 13 C -0.519 4.519 14 H 0.070 0.930 15 C 0.062 3.938 16 N -0.891 5.891 17 Si 0.914 3.086 18 H -0.274 1.274 19 H -0.285 1.285 20 H -0.273 1.273 21 C -0.002 4.002 22 O -0.227 6.227 23 H 0.072 0.928 24 H 0.086 0.914 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.038 0.962 29 H 0.101 0.899 30 H 0.016 0.984 31 H 0.266 0.734 32 H 0.239 0.761 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.863 -17.084 -1.245 20.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.024 4.024 3 O -0.153 6.153 4 C 0.127 3.873 5 N -0.174 5.174 6 C -0.133 4.133 7 C 0.384 3.616 8 O -0.402 6.402 9 O -0.244 6.244 10 C 0.161 3.839 11 H 0.067 0.933 12 C -0.213 4.213 13 C -0.557 4.557 14 H 0.089 0.911 15 C -0.140 4.140 16 N -0.529 5.529 17 Si 0.741 3.259 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.199 1.199 21 C -0.073 4.073 22 O -0.119 6.119 23 H 0.091 0.909 24 H 0.104 0.896 25 H 0.091 0.909 26 H 0.091 0.909 27 H 0.091 0.909 28 H 0.058 0.942 29 H 0.119 0.881 30 H 0.035 0.965 31 H 0.076 0.924 32 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -11.885 -16.339 -1.264 20.244 hybrid contribution 0.238 -0.050 0.386 0.456 sum -11.647 -16.389 -0.878 20.125 Atomic orbital electron populations 1.21805 0.91341 1.03485 1.04283 1.23030 0.96792 0.79625 1.02950 1.86397 1.08955 1.30487 1.89416 1.23417 0.83483 0.81539 0.98838 1.71360 1.03929 1.20577 1.21577 1.20941 0.89794 0.92557 1.10001 1.19297 0.85258 0.83633 0.73383 1.90835 1.18981 1.82952 1.47449 1.86690 1.43418 1.13795 1.80527 1.20764 0.83585 0.84567 0.94971 0.93329 1.22175 1.02539 1.00173 0.96417 1.21008 1.00574 0.97697 1.36466 0.91141 1.24878 0.94652 0.98826 0.95600 1.69892 1.05505 1.32562 1.44949 0.86299 0.78105 0.81522 0.80021 1.19968 1.21080 1.19881 1.24939 0.85917 0.92567 1.03874 1.84367 1.16117 1.39313 1.72126 0.90939 0.89574 0.90933 0.90875 0.90866 0.94240 0.88084 0.96450 0.92370 0.74508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.81 10.28 37.16 0.38 -0.43 16 2 C 0.05 0.38 6.38 37.16 0.24 0.62 16 3 O -0.24 -3.05 10.19 -40.96 -0.42 -3.47 16 4 C 0.37 5.57 8.98 52.21 0.47 6.04 16 5 N -0.43 -8.12 11.40 -11.73 -0.13 -8.26 16 6 C -0.02 -0.28 7.04 -83.01 -0.58 -0.87 16 7 C 0.54 12.24 7.93 34.38 0.27 12.51 16 8 O -0.51 -12.03 16.15 -19.30 -0.31 -12.34 16 9 O -0.33 -8.55 9.88 -40.75 -0.40 -8.95 16 10 C 0.21 5.95 2.56 -27.89 -0.07 5.87 16 11 H 0.05 1.45 7.16 -51.93 -0.37 1.08 16 12 C -0.16 -4.06 9.33 37.16 0.35 -3.71 16 13 C -0.52 -15.12 8.90 -34.44 -0.31 -15.43 16 14 H 0.07 2.04 7.81 -52.48 -0.41 1.63 16 15 C 0.06 1.76 5.30 -17.82 -0.09 1.66 16 16 N -0.89 -25.68 11.32 55.43 0.63 -25.05 16 17 Si 0.91 21.62 29.54 -169.99 -5.02 16.60 16 18 H -0.27 -6.42 7.11 56.52 0.40 -6.01 16 19 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 20 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 21 C 0.00 -0.02 11.93 29.93 0.36 0.34 16 22 O -0.23 -2.89 10.20 -17.72 -0.18 -3.07 16 23 H 0.07 0.41 8.14 -51.93 -0.42 -0.02 16 24 H 0.09 0.27 8.14 -51.93 -0.42 -0.16 16 25 H 0.07 0.41 8.14 -51.93 -0.42 -0.01 16 26 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 27 H 0.07 0.47 8.14 -51.93 -0.42 0.05 16 28 H 0.04 0.99 8.14 -51.93 -0.42 0.56 16 29 H 0.10 2.78 6.07 -51.93 -0.32 2.46 16 30 H 0.02 0.41 8.14 -51.93 -0.42 -0.02 16 31 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 32 H 0.24 2.29 8.06 -52.49 -0.42 1.86 16 LS Contribution 293.02 15.07 4.42 4.42 Total: -1.00 -33.29 293.02 -4.03 -37.32 By element: Atomic # 1 Polarization: -0.19 SS G_CDS: -3.61 Total: -3.80 kcal Atomic # 6 Polarization: 5.59 SS G_CDS: 1.01 Total: 6.60 kcal Atomic # 7 Polarization: -33.80 SS G_CDS: 0.49 Total: -33.31 kcal Atomic # 8 Polarization: -26.52 SS G_CDS: -1.31 Total: -27.83 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.60 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -33.29 -4.03 -37.32 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000774087217.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.390 kcal (2) G-P(sol) polarization free energy of solvation -33.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds