Wall clock time and date at job start Mon Mar 30 2020 04:30:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.36036 * 116.99915 * 2 1 4 4 C 1.38492 * 120.06825 * 0.25972 * 3 2 1 5 5 C 1.38278 * 120.03337 * 180.25458 * 4 3 2 6 6 C 1.50693 * 119.91991 * 179.76754 * 5 4 3 7 7 H 1.09003 * 109.47424 * 219.72058 * 6 5 4 8 8 N 1.46897 * 109.47415 * 339.72009 * 6 5 4 9 9 C 1.50701 * 109.47593 * 99.72156 * 6 5 4 10 10 H 1.08005 * 119.99393 * 335.50750 * 9 6 5 11 11 C 1.37873 * 120.00515 * 155.50283 * 9 6 5 12 12 N 1.31524 * 119.99983 * 7.05368 * 11 9 6 13 13 Si 1.86803 * 120.00214 * 187.05545 * 11 9 6 14 14 H 1.48495 * 109.46986 * 269.99741 * 13 11 9 15 15 H 1.48497 * 109.47074 * 30.00289 * 13 11 9 16 16 H 1.48496 * 109.46843 * 149.99923 * 13 11 9 17 17 C 1.38366 * 120.16332 * 359.48935 * 5 4 3 18 18 Cl 1.73599 * 119.93326 * 180.23664 * 17 5 4 19 19 C 1.38315 * 120.13297 * 0.24977 * 17 5 4 20 20 C 1.38724 * 119.97045 * 0.02562 * 19 17 5 21 21 N 1.39959 * 120.08325 * 179.97438 * 20 19 17 22 22 H 1.08997 * 109.46773 * 179.97438 * 1 2 3 23 23 H 1.09000 * 109.46290 * 299.99558 * 1 2 3 24 24 H 1.08993 * 109.47206 * 59.99480 * 1 2 3 25 25 H 1.08001 * 119.98743 * 359.97438 * 4 3 2 26 26 H 1.00905 * 110.99840 * 66.86964 * 8 6 5 27 27 H 1.00899 * 111.00679 * 190.82432 * 8 6 5 28 28 H 0.96999 * 119.99359 * 355.34582 * 12 11 9 29 29 H 1.08002 * 120.01400 * 179.97438 * 19 17 5 30 30 H 0.97004 * 119.99686 * 359.97438 * 21 20 19 31 31 H 0.96999 * 119.99693 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2121 0.0000 4 6 1.2937 2.3745 0.0054 5 6 1.9222 3.6062 0.0001 6 6 1.1004 4.8693 0.0007 7 1 1.5621 5.6035 -0.6595 8 7 -0.2575 4.5703 -0.4730 9 6 1.0333 5.4244 1.4002 10 1 1.1682 4.7690 2.2480 11 6 0.8000 6.7687 1.5983 12 7 0.4986 7.5413 0.5774 13 14 0.9119 7.4930 3.3165 14 1 -0.4184 7.4193 3.9723 15 1 1.9005 6.7240 4.1144 16 1 1.3426 8.9114 3.2287 17 6 3.3038 3.6817 0.0000 18 17 4.0866 5.2312 -0.0005 19 6 4.0624 2.5252 0.0000 20 6 3.4377 1.2866 -0.0004 21 7 4.2031 0.1148 -0.0009 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3632 0.5138 0.8901 24 1 -0.3633 0.5139 -0.8899 25 1 0.2151 2.3190 0.0093 26 1 -0.7470 3.9792 0.1820 27 1 -0.7739 5.4189 -0.6499 28 1 0.5066 7.1802 -0.3229 29 1 5.1407 2.5864 -0.0005 30 1 5.1716 0.1682 -0.0014 31 1 3.7649 -0.7506 -0.0009 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000238416014.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:30:23 Heat of formation + Delta-G solvation = -24.893940 kcal Electronic energy + Delta-G solvation = -17050.029983 eV Core-core repulsion = 14164.090026 eV Total energy + Delta-G solvation = -2885.939957 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 256.072 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.84698 -37.40654 -35.63920 -35.34017 -33.29375 -31.14973 -29.40479 -28.24686 -27.12733 -25.09136 -22.69314 -21.77390 -20.35721 -17.63916 -16.93389 -16.83367 -16.35411 -15.44158 -14.92828 -14.80220 -13.94620 -13.77020 -13.66957 -13.19127 -12.85542 -12.43270 -12.20895 -11.85868 -11.47689 -11.42364 -10.92302 -10.74464 -10.69723 -10.28902 -10.15301 -9.71919 -9.56601 -9.20693 -8.58400 -7.93413 -7.40569 -6.77955 -6.34609 -4.16315 1.79462 2.10039 3.00134 3.38973 3.45225 3.54311 3.60188 4.23208 4.26989 4.50978 5.21423 5.29025 5.37534 5.39187 5.61859 5.65846 5.75487 5.97245 6.20407 6.26301 6.37794 6.83519 6.89675 7.13261 7.37587 7.48945 7.92948 7.95349 8.06157 8.29104 8.48964 8.67972 8.79445 9.55295 10.94537 Molecular weight = 256.07amu Principal moments of inertia in cm(-1) A = 0.022454 B = 0.007865 C = 0.006675 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1246.718735 B = 3559.031662 C = 4193.898684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.327 6.327 3 C 0.047 3.953 4 C -0.143 4.143 5 C -0.031 4.031 6 C 0.225 3.775 7 H 0.061 0.939 8 N -0.855 5.855 9 C -0.610 4.610 10 H 0.047 0.953 11 C 0.032 3.968 12 N -0.906 5.906 13 Si 1.064 2.936 14 H -0.289 1.289 15 H -0.287 1.287 16 H -0.284 1.284 17 C -0.021 4.021 18 Cl -0.066 7.066 19 C -0.163 4.163 20 C 0.177 3.823 21 N -0.880 5.880 22 H 0.091 0.909 23 H 0.053 0.947 24 H 0.055 0.945 25 H 0.136 0.864 26 H 0.319 0.681 27 H 0.332 0.668 28 H 0.270 0.730 29 H 0.128 0.872 30 H 0.393 0.607 31 H 0.399 0.601 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.617 -12.552 -1.257 13.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.241 6.241 3 C -0.001 4.001 4 C -0.163 4.163 5 C -0.035 4.035 6 C 0.116 3.884 7 H 0.078 0.922 8 N -0.382 5.382 9 C -0.650 4.650 10 H 0.066 0.934 11 C -0.174 4.174 12 N -0.542 5.542 13 Si 0.893 3.107 14 H -0.216 1.216 15 H -0.213 1.213 16 H -0.209 1.209 17 C -0.049 4.049 18 Cl -0.037 7.037 19 C -0.187 4.187 20 C 0.074 3.926 21 N -0.423 5.423 22 H 0.110 0.890 23 H 0.072 0.928 24 H 0.074 0.926 25 H 0.154 0.846 26 H 0.129 0.871 27 H 0.144 0.856 28 H 0.082 0.918 29 H 0.145 0.855 30 H 0.220 0.780 31 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 3.892 -11.490 -1.036 12.175 hybrid contribution 0.016 -0.941 0.141 0.952 sum 3.908 -12.431 -0.895 13.061 Atomic orbital electron populations 1.22937 0.78798 1.02894 1.01678 1.85874 1.21013 1.26957 1.90303 1.18468 0.90237 0.84776 1.06570 1.20820 1.00140 0.90291 1.05005 1.19798 0.91594 0.96221 0.95849 1.18141 0.85910 0.88689 0.95619 0.92156 1.59594 1.05917 1.21776 1.50892 1.22388 1.54767 0.95901 0.91962 0.93440 1.25744 0.92696 0.93684 1.05237 1.70814 1.43342 1.39952 1.00118 0.83610 0.76558 0.76079 0.74460 1.21596 1.21340 1.20923 1.20281 0.92269 0.85996 1.06325 1.98334 1.80259 1.28335 1.96805 1.20087 0.99163 0.89079 1.10371 1.16686 0.87225 0.87186 1.01454 1.42078 1.07598 1.05159 1.87440 0.89023 0.92822 0.92649 0.84595 0.87059 0.85610 0.91829 0.85454 0.77974 0.77326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.39 9.81 101.05 0.99 1.38 16 2 O -0.33 -5.01 9.74 -19.86 -0.19 -5.21 16 3 C 0.05 0.84 6.70 -39.09 -0.26 0.57 16 4 C -0.14 -2.79 8.26 -39.47 -0.33 -3.12 16 5 C -0.03 -0.69 5.07 -104.56 -0.53 -1.22 16 6 C 0.23 5.47 2.01 -70.02 -0.14 5.33 16 7 H 0.06 1.62 6.24 -51.93 -0.32 1.29 16 8 N -0.85 -18.86 8.52 -6.65 -0.06 -18.91 16 9 C -0.61 -16.25 8.28 -34.44 -0.29 -16.54 16 10 H 0.05 1.32 7.81 -52.48 -0.41 0.91 16 11 C 0.03 0.88 5.45 -17.82 -0.10 0.79 16 12 N -0.91 -25.94 13.63 55.43 0.76 -25.18 16 13 Si 1.06 24.97 29.91 -169.99 -5.08 19.89 16 14 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 15 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 16 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 17 C -0.02 -0.43 6.30 -39.51 -0.25 -0.68 16 18 Cl -0.07 -1.39 27.29 -51.86 -1.42 -2.81 16 19 C -0.16 -2.89 9.67 -39.37 -0.38 -3.27 16 20 C 0.18 2.96 6.77 -83.57 -0.57 2.39 16 21 N -0.88 -11.15 9.09 32.51 0.30 -10.85 16 22 H 0.09 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.05 0.65 7.65 -51.93 -0.40 0.26 16 24 H 0.05 0.67 7.67 -51.93 -0.40 0.27 16 25 H 0.14 2.50 4.66 -52.49 -0.24 2.26 16 26 H 0.32 6.67 7.62 -39.29 -0.30 6.37 16 27 H 0.33 7.59 8.44 -39.29 -0.33 7.26 16 28 H 0.27 7.70 6.22 -40.82 -0.25 7.44 16 29 H 0.13 1.93 8.06 -52.49 -0.42 1.51 16 30 H 0.39 4.00 8.85 -40.82 -0.36 3.64 16 31 H 0.40 4.62 8.19 -40.82 -0.33 4.28 16 LS Contribution 277.39 15.07 4.18 4.18 Total: -1.00 -29.59 277.39 -6.36 -35.95 By element: Atomic # 1 Polarization: 20.30 SS G_CDS: -3.00 Total: 17.30 kcal Atomic # 6 Polarization: -12.52 SS G_CDS: -1.85 Total: -14.36 kcal Atomic # 7 Polarization: -55.94 SS G_CDS: 0.99 Total: -54.94 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.19 Total: -5.21 kcal Atomic # 14 Polarization: 24.97 SS G_CDS: -5.08 Total: 19.89 kcal Atomic # 17 Polarization: -1.39 SS G_CDS: -1.42 Total: -2.81 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -29.59 -6.36 -35.95 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000238416014.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.055 kcal (2) G-P(sol) polarization free energy of solvation -29.590 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds