Wall clock time and date at job start Mon Mar 30 2020 04:22:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.36001 * 116.99547 * 2 1 4 4 C 1.38587 * 120.07145 * 359.97438 * 3 2 1 5 5 C 1.38235 * 120.02568 * 180.02562 * 4 3 2 6 6 C 1.50700 * 119.92288 * 180.02562 * 5 4 3 7 7 H 1.08998 * 109.46951 * 19.98365 * 6 5 4 8 8 N 1.46904 * 109.46360 * 139.97955 * 6 5 4 9 9 C 1.50697 * 109.47299 * 259.97567 * 6 5 4 10 10 H 1.07999 * 120.00140 * 0.02562 * 9 6 5 11 11 C 1.37871 * 119.99871 * 180.02562 * 9 6 5 12 12 N 1.31519 * 120.00059 * 179.97438 * 11 9 6 13 13 Si 1.86795 * 120.00259 * 0.02562 * 11 9 6 14 14 H 1.48494 * 109.47459 * 89.99591 * 13 11 9 15 15 H 1.48504 * 109.47265 * 210.00057 * 13 11 9 16 16 H 1.48500 * 109.46947 * 329.99771 * 13 11 9 17 17 C 1.38249 * 120.14975 * 0.02562 * 5 4 3 18 18 C 1.38335 * 120.13591 * 359.97438 * 17 5 4 19 19 Cl 1.73604 * 120.01306 * 179.72703 * 18 17 5 20 20 C 1.38670 * 119.97803 * 359.97438 * 18 17 5 21 21 O 1.36021 * 120.07871 * 179.97438 * 20 18 17 22 22 H 1.09001 * 109.47331 * 60.00185 * 1 2 3 23 23 H 1.08999 * 109.46740 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47235 * 300.00194 * 1 2 3 25 25 H 1.08004 * 119.98669 * 0.02562 * 4 3 2 26 26 H 1.00900 * 111.00427 * 60.00166 * 8 6 5 27 27 H 1.00900 * 110.99634 * 183.95589 * 8 6 5 28 28 H 0.96998 * 120.00518 * 179.97438 * 12 11 9 29 29 H 1.08001 * 119.93241 * 180.02562 * 17 5 4 30 30 H 0.96692 * 113.99994 * 90.00310 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 1.2929 2.3750 -0.0005 5 6 1.9213 3.6062 -0.0011 6 6 1.0998 4.8696 -0.0011 7 1 0.0922 4.6477 0.3506 8 7 1.7225 5.8584 0.8892 9 6 1.0327 5.4252 -1.4003 10 1 1.5344 4.9144 -2.2088 11 6 0.3308 6.5857 -1.6482 12 7 0.2727 7.0709 -2.8692 13 14 -0.5364 7.4697 -0.2497 14 1 0.3902 8.4550 0.3633 15 1 -1.7322 8.1756 -0.7762 16 1 -0.9567 6.4811 0.7756 17 6 3.3018 3.6812 -0.0016 18 6 4.0602 2.5242 -0.0011 19 17 5.7934 2.6221 -0.0089 20 6 3.4354 1.2862 0.0005 21 8 4.1791 0.1473 0.0005 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8899 25 1 0.2143 2.3195 -0.0005 26 1 2.6582 6.0810 0.5842 27 1 1.1566 6.6910 0.9568 28 1 -0.2214 7.8872 -3.0438 29 1 3.7892 4.6450 -0.0016 30 1 4.3951 -0.1813 0.8839 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095684563.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:22:51 Heat of formation + Delta-G solvation = -56.340863 kcal Electronic energy + Delta-G solvation = -16975.112550 eV Core-core repulsion = 13990.090291 eV Total energy + Delta-G solvation = -2985.022260 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.18705 -37.79962 -36.96527 -36.15233 -34.29027 -31.89611 -29.90002 -29.20874 -27.09158 -26.10991 -23.14764 -22.08586 -20.40834 -18.43276 -17.25237 -16.98560 -16.41026 -15.83565 -15.51134 -14.96644 -14.63266 -14.25973 -13.95946 -13.48284 -12.81604 -12.66189 -12.52281 -11.96785 -11.66654 -11.60238 -11.54974 -11.06458 -10.96087 -10.73578 -10.37036 -10.25585 -10.19665 -9.66530 -8.88400 -8.30223 -7.88679 -7.58065 -6.32905 -4.38324 1.42162 1.66544 2.30397 3.05638 3.18585 3.20541 3.47636 3.90542 4.13282 4.37486 4.93196 5.08658 5.26754 5.34045 5.34539 5.50216 5.63073 5.72897 5.85233 5.95445 6.36026 6.48252 6.56514 6.86432 7.15148 7.30905 7.38653 7.88173 7.93629 8.14272 8.35169 8.74120 9.24401 10.79332 Molecular weight = 257.06amu Principal moments of inertia in cm(-1) A = 0.021267 B = 0.007231 C = 0.005937 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1316.301055 B = 3871.488302 C = 4715.402444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.310 6.310 3 C 0.113 3.887 4 C -0.191 4.191 5 C 0.026 3.974 6 C 0.207 3.793 7 H 0.054 0.946 8 N -0.849 5.849 9 C -0.550 4.550 10 H 0.078 0.922 11 C 0.075 3.925 12 N -0.885 5.885 13 Si 0.872 3.128 14 H -0.273 1.273 15 H -0.289 1.289 16 H -0.259 1.259 17 C -0.119 4.119 18 C -0.022 4.022 19 Cl -0.065 7.065 20 C 0.055 3.945 21 O -0.477 6.477 22 H 0.059 0.941 23 H 0.097 0.903 24 H 0.055 0.945 25 H 0.135 0.865 26 H 0.333 0.667 27 H 0.320 0.680 28 H 0.268 0.732 29 H 0.137 0.863 30 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.028 -9.999 8.217 13.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.223 6.223 3 C 0.067 3.933 4 C -0.210 4.210 5 C 0.025 3.975 6 C 0.098 3.902 7 H 0.072 0.928 8 N -0.383 5.383 9 C -0.590 4.590 10 H 0.097 0.903 11 C -0.129 4.129 12 N -0.521 5.521 13 Si 0.701 3.299 14 H -0.200 1.200 15 H -0.216 1.216 16 H -0.184 1.184 17 C -0.138 4.138 18 C -0.049 4.049 19 Cl -0.036 7.036 20 C 0.008 3.992 21 O -0.285 6.285 22 H 0.078 0.922 23 H 0.116 0.884 24 H 0.074 0.926 25 H 0.153 0.847 26 H 0.146 0.854 27 H 0.136 0.864 28 H 0.078 0.922 29 H 0.155 0.845 30 H 0.232 0.768 Dipole moment (debyes) X Y Z Total from point charges 3.053 -10.535 8.046 13.603 hybrid contribution -0.569 1.331 0.123 1.453 sum 2.484 -9.204 8.169 12.555 Atomic orbital electron populations 1.23082 0.78493 1.03577 1.01853 1.86077 1.21187 1.26166 1.88905 1.19061 0.90812 0.84862 0.98570 1.21124 1.00458 0.91108 1.08360 1.19811 0.92788 0.94928 0.89995 1.18526 0.92834 0.86635 0.92205 0.92820 1.59729 1.06912 1.15822 1.55799 1.21563 1.34490 1.09500 0.93413 0.90342 1.25020 0.95255 0.96979 0.95644 1.69886 1.41000 1.21637 1.19589 0.87020 0.79849 0.80508 0.82553 1.19976 1.21594 1.18371 1.20696 0.93296 0.96802 1.03001 1.20969 0.84607 0.93668 1.05688 1.98336 1.09795 1.98543 1.96904 1.17095 0.86220 0.85207 1.10645 1.84933 1.71661 1.39247 1.32613 0.92244 0.88447 0.92599 0.84716 0.85439 0.86394 0.92197 0.84534 0.76817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.31 -4.77 10.28 -34.27 -0.35 -5.13 16 3 C 0.11 1.94 6.70 -39.13 -0.26 1.67 16 4 C -0.19 -3.45 8.66 -39.45 -0.34 -3.79 16 5 C 0.03 0.52 4.89 -104.62 -0.51 0.01 16 6 C 0.21 4.61 2.48 -70.02 -0.17 4.44 16 7 H 0.05 1.21 7.06 -51.93 -0.37 0.85 16 8 N -0.85 -17.61 8.97 -6.65 -0.06 -17.67 16 9 C -0.55 -14.51 9.28 -34.44 -0.32 -14.83 16 10 H 0.08 2.31 7.98 -52.49 -0.42 1.89 16 11 C 0.08 2.04 5.47 -17.82 -0.10 1.94 16 12 N -0.88 -25.68 13.96 55.43 0.77 -24.91 16 13 Si 0.87 19.90 24.61 -169.99 -4.18 15.72 16 14 H -0.27 -6.00 7.01 56.52 0.40 -5.60 16 15 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 16 H -0.26 -5.68 6.54 56.52 0.37 -5.31 16 17 C -0.12 -2.23 9.06 -39.54 -0.36 -2.59 16 18 C -0.02 -0.38 6.33 -39.39 -0.25 -0.63 16 19 Cl -0.06 -0.99 28.50 -51.86 -1.48 -2.47 16 20 C 0.05 0.93 6.71 -39.10 -0.26 0.67 16 21 O -0.48 -7.25 12.75 -34.33 -0.44 -7.69 16 22 H 0.06 0.69 7.66 -51.93 -0.40 0.29 16 23 H 0.10 0.84 8.14 -51.93 -0.42 0.41 16 24 H 0.06 0.58 7.66 -51.93 -0.40 0.18 16 25 H 0.14 2.21 6.27 -52.48 -0.33 1.88 16 26 H 0.33 6.56 7.33 -39.29 -0.29 6.28 16 27 H 0.32 6.77 4.29 -39.29 -0.17 6.60 16 28 H 0.27 7.28 8.31 -40.82 -0.34 6.94 16 29 H 0.14 2.50 6.65 -52.49 -0.35 2.15 16 30 H 0.38 4.01 9.06 45.56 0.41 4.42 16 LS Contribution 269.56 15.07 4.06 4.06 Total: -1.00 -30.07 269.56 -5.16 -35.22 By element: Atomic # 1 Polarization: 16.60 SS G_CDS: -1.90 Total: 14.70 kcal Atomic # 6 Polarization: -10.25 SS G_CDS: -1.58 Total: -11.84 kcal Atomic # 7 Polarization: -43.30 SS G_CDS: 0.71 Total: -42.58 kcal Atomic # 8 Polarization: -12.02 SS G_CDS: -0.79 Total: -12.81 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -4.18 Total: 15.72 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.48 Total: -2.47 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -30.07 -5.16 -35.22 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095684563.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.117 kcal (2) G-P(sol) polarization free energy of solvation -30.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.158 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds