Wall clock time and date at job start Mon Mar 30 2020 04:22:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36010 * 117.00175 * 2 1 4 4 C 1.38557 * 120.06176 * 359.97438 * 3 2 1 5 5 C 1.38241 * 120.01766 * 180.02562 * 4 3 2 6 6 C 1.38352 * 120.12986 * 359.95690 * 5 4 3 7 7 Cl 1.73603 * 119.94052 * 180.02562 * 6 5 4 8 8 C 1.38344 * 120.12159 * 0.04836 * 6 5 4 9 9 C 1.50704 * 120.00662 * 179.97438 * 8 6 5 10 10 H 1.08997 * 109.47066 * 346.30362 * 9 8 6 11 11 N 1.46897 * 109.46841 * 226.31093 * 9 8 6 12 12 C 1.50693 * 109.47299 * 106.31052 * 9 8 6 13 13 H 1.08006 * 120.00372 * 359.97438 * 12 9 8 14 14 C 1.37879 * 119.99997 * 179.97438 * 12 9 8 15 15 N 1.31513 * 119.99946 * 359.97438 * 14 12 9 16 16 Si 1.86803 * 119.99921 * 179.97438 * 14 12 9 17 17 H 1.48499 * 109.46907 * 269.99603 * 16 14 12 18 18 H 1.48491 * 109.47359 * 30.00196 * 16 14 12 19 19 H 1.48499 * 109.46859 * 150.00080 * 16 14 12 20 20 C 1.38565 * 119.98651 * 0.24567 * 8 6 5 21 21 O 1.35991 * 120.06645 * 179.72276 * 20 8 6 22 22 H 1.09000 * 109.46726 * 300.00140 * 1 2 3 23 23 H 1.09004 * 109.47196 * 60.00208 * 1 2 3 24 24 H 1.08994 * 109.47165 * 179.97438 * 1 2 3 25 25 H 1.08009 * 119.99220 * 0.02562 * 4 3 2 26 26 H 1.07996 * 119.93476 * 179.97438 * 5 4 3 27 27 H 1.00906 * 111.00273 * 291.62369 * 11 9 8 28 28 H 1.00897 * 111.00200 * 55.57423 * 11 9 8 29 29 H 0.97001 * 119.99713 * 0.02562 * 15 14 12 30 30 H 0.96705 * 113.99333 * 90.00500 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 1.2932 2.3747 -0.0005 5 6 1.9218 3.6059 -0.0011 6 6 3.3033 3.6804 -0.0002 7 17 4.0876 5.2292 -0.0002 8 6 4.0609 2.5228 0.0003 9 6 5.5656 2.6069 0.0007 10 1 5.8727 3.6240 -0.2428 11 7 6.1081 1.6789 -1.0005 12 6 6.0891 2.2368 1.3644 13 1 5.4010 1.9680 2.1524 14 6 7.4465 2.2414 1.6064 15 7 8.2844 2.5682 0.6469 16 14 8.0953 1.7833 3.2972 17 1 8.1929 3.0039 4.1373 18 1 7.1694 0.8147 3.9370 19 1 9.4396 1.1672 3.1612 20 6 3.4360 1.2861 -0.0054 21 8 4.1792 0.1472 -0.0106 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 0.2145 2.3192 -0.0005 26 1 1.3333 4.5115 -0.0019 27 1 5.9545 0.7202 -0.7257 28 1 5.7160 1.8608 -1.9122 29 1 7.9474 2.8064 -0.2310 30 1 4.3941 -0.1862 0.8713 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260595614.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:22:00 Heat of formation + Delta-G solvation = -61.789715 kcal Electronic energy + Delta-G solvation = -17383.085717 eV Core-core repulsion = 14397.827177 eV Total energy + Delta-G solvation = -2985.258540 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 257.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.24229 -37.98654 -36.52911 -35.36835 -34.51961 -31.33890 -29.39844 -29.24510 -27.11315 -25.48002 -22.88732 -22.00432 -20.52337 -18.19795 -17.30717 -16.95221 -16.20287 -15.84585 -15.30213 -14.51752 -14.21416 -13.93365 -13.80383 -13.56715 -12.75880 -12.58925 -12.38099 -12.11637 -11.67700 -11.44405 -11.06871 -10.89535 -10.70161 -10.35170 -10.22877 -10.07462 -9.91757 -8.88270 -8.31507 -8.08420 -7.76675 -7.32811 -6.16296 -4.00346 1.45200 1.55876 2.66000 3.33362 3.47717 3.50187 3.65891 3.80832 4.60247 4.61650 4.88760 5.06854 5.07900 5.26952 5.37320 5.44269 5.54403 5.82446 6.11028 6.20772 6.31249 6.36329 6.55595 6.86060 7.30922 7.40331 7.98655 8.19132 8.34076 8.73398 8.95240 9.09021 9.83425 11.23903 Molecular weight = 257.06amu Principal moments of inertia in cm(-1) A = 0.020230 B = 0.008511 C = 0.006911 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1383.731622 B = 3288.956122 C = 4050.269365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.308 6.308 3 C 0.099 3.901 4 C -0.209 4.209 5 C -0.085 4.085 6 C -0.060 4.060 7 Cl -0.065 7.065 8 C -0.050 4.050 9 C 0.237 3.763 10 H 0.055 0.945 11 N -0.827 5.827 12 C -0.609 4.609 13 H 0.043 0.957 14 C 0.041 3.959 15 N -0.888 5.888 16 Si 1.065 2.935 17 H -0.290 1.290 18 H -0.291 1.291 19 H -0.285 1.285 20 C 0.090 3.910 21 O -0.475 6.475 22 H 0.053 0.947 23 H 0.052 0.948 24 H 0.097 0.903 25 H 0.132 0.868 26 H 0.129 0.871 27 H 0.342 0.658 28 H 0.298 0.702 29 H 0.293 0.707 30 H 0.390 0.610 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.043 -1.251 -0.911 15.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.221 6.221 3 C 0.053 3.947 4 C -0.228 4.228 5 C -0.104 4.104 6 C -0.087 4.087 7 Cl -0.036 7.036 8 C -0.054 4.054 9 C 0.128 3.872 10 H 0.073 0.927 11 N -0.358 5.358 12 C -0.648 4.648 13 H 0.061 0.939 14 C -0.170 4.170 15 N -0.522 5.522 16 Si 0.895 3.105 17 H -0.217 1.217 18 H -0.218 1.218 19 H -0.211 1.211 20 C 0.044 3.956 21 O -0.285 6.285 22 H 0.071 0.929 23 H 0.071 0.929 24 H 0.115 0.885 25 H 0.149 0.851 26 H 0.147 0.853 27 H 0.160 0.840 28 H 0.108 0.892 29 H 0.106 0.894 30 H 0.247 0.753 Dipole moment (debyes) X Y Z Total from point charges -12.791 -1.139 -0.486 12.851 hybrid contribution -2.817 0.128 -0.368 2.844 sum -15.608 -1.011 -0.854 15.664 Atomic orbital electron populations 1.23028 0.79146 1.03605 1.01086 1.86157 1.20665 1.26444 1.88822 1.19563 0.91848 0.84611 0.98683 1.20824 0.99541 0.91345 1.11086 1.20737 0.92433 0.97619 0.99610 1.20574 0.91930 0.87070 1.09164 1.98333 1.81195 1.27027 1.97064 1.21764 1.02087 0.89370 0.92176 1.18518 0.80134 0.95070 0.93491 0.92728 1.59557 1.63980 1.09150 1.03147 1.21554 0.94251 1.54802 0.94194 0.93897 1.25560 0.93096 0.94110 1.04212 1.70495 1.38201 1.38324 1.05167 0.83622 0.75797 0.76373 0.74744 1.21691 1.21782 1.21098 1.17336 0.85315 0.86586 1.06369 1.84702 1.71347 1.38563 1.33870 0.92867 0.92899 0.88468 0.85056 0.85278 0.84037 0.89239 0.89421 0.75298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 9.81 101.05 0.99 1.26 16 2 O -0.31 -4.74 10.28 -34.29 -0.35 -5.09 16 3 C 0.10 1.69 6.70 -39.13 -0.26 1.43 16 4 C -0.21 -3.10 9.04 -39.46 -0.36 -3.46 16 5 C -0.09 -1.35 9.82 -39.54 -0.39 -1.74 16 6 C -0.06 -1.15 6.31 -39.50 -0.25 -1.40 16 7 Cl -0.07 -1.23 27.05 -51.86 -1.40 -2.63 16 8 C -0.05 -1.07 4.82 -104.46 -0.50 -1.57 16 9 C 0.24 5.83 2.20 -70.02 -0.15 5.68 16 10 H 0.06 1.46 6.20 -51.93 -0.32 1.13 16 11 N -0.83 -19.74 7.61 -6.65 -0.05 -19.79 16 12 C -0.61 -16.46 8.40 -34.44 -0.29 -16.75 16 13 H 0.04 1.16 7.74 -52.48 -0.41 0.76 16 14 C 0.04 1.14 5.39 -17.82 -0.10 1.05 16 15 N -0.89 -26.66 13.50 55.43 0.75 -25.91 16 16 Si 1.07 24.99 29.90 -169.99 -5.08 19.91 16 17 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 18 H -0.29 -6.48 7.11 56.52 0.40 -6.08 16 19 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 20 C 0.09 1.78 6.48 -39.12 -0.25 1.53 16 21 O -0.48 -9.22 10.13 -34.23 -0.35 -9.57 16 22 H 0.05 0.47 7.66 -51.93 -0.40 0.07 16 23 H 0.05 0.47 7.66 -51.93 -0.40 0.07 16 24 H 0.10 0.76 8.14 -51.93 -0.42 0.33 16 25 H 0.13 1.49 6.30 -52.48 -0.33 1.16 16 26 H 0.13 1.68 8.06 -52.49 -0.42 1.25 16 27 H 0.34 8.10 6.27 -39.29 -0.25 7.85 16 28 H 0.30 6.56 8.98 -39.29 -0.35 6.20 16 29 H 0.29 8.89 6.39 -40.82 -0.26 8.63 16 30 H 0.39 6.77 9.06 45.56 0.41 7.18 16 LS Contribution 271.25 15.07 4.09 4.09 Total: -1.00 -31.09 271.25 -5.90 -36.99 By element: Atomic # 1 Polarization: 17.93 SS G_CDS: -1.94 Total: 15.99 kcal Atomic # 6 Polarization: -12.42 SS G_CDS: -1.56 Total: -13.98 kcal Atomic # 7 Polarization: -46.40 SS G_CDS: 0.70 Total: -45.70 kcal Atomic # 8 Polarization: -13.96 SS G_CDS: -0.70 Total: -14.66 kcal Atomic # 14 Polarization: 24.99 SS G_CDS: -5.08 Total: 19.91 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -1.40 Total: -2.63 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -31.09 -5.90 -36.99 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260595614.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.798 kcal (2) G-P(sol) polarization free energy of solvation -31.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.992 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds