Wall clock time and date at job start Mon Mar 30 2020 04:38:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38723 * 120.41301 * 2 1 4 4 C 1.38683 * 118.54443 * 179.97438 * 3 2 1 5 5 N 1.32202 * 119.18173 * 359.73047 * 4 3 2 6 6 C 1.32489 * 120.75205 * 0.54935 * 5 4 3 7 7 C 1.48551 * 119.20405 * 179.71895 * 6 5 4 8 8 N 1.30684 * 126.40531 * 179.70382 * 7 6 5 9 9 O 1.21287 * 110.11242 * 180.02562 * 8 7 6 10 10 C 1.33666 * 110.01557 * 0.02562 * 9 8 7 11 11 C 1.50702 * 126.45049 * 179.97438 * 10 9 8 12 12 H 1.08999 * 109.47077 * 180.02562 * 11 10 9 13 13 C 1.52998 * 109.46870 * 300.02063 * 11 10 9 14 14 C 1.50693 * 109.47160 * 60.02195 * 11 10 9 15 15 H 1.08002 * 120.00395 * 0.02562 * 14 11 10 16 16 C 1.37881 * 119.99882 * 180.02562 * 14 11 10 17 17 N 1.31516 * 120.00041 * 359.97438 * 16 14 11 18 18 Si 1.86805 * 119.99922 * 180.02562 * 16 14 11 19 19 H 1.48507 * 109.47077 * 359.97438 * 18 16 14 20 20 H 1.48495 * 109.47171 * 119.99621 * 18 16 14 21 21 H 1.48495 * 109.46601 * 239.99708 * 18 16 14 22 22 N 1.30981 * 107.10420 * 359.97438 * 10 9 8 23 23 N 1.32180 * 120.40625 * 179.97438 * 2 1 3 24 24 H 1.09006 * 109.46741 * 270.01777 * 1 2 3 25 25 H 1.08996 * 109.46966 * 30.01959 * 1 2 3 26 26 H 1.09003 * 109.47424 * 150.02360 * 1 2 3 27 27 H 1.08002 * 120.72870 * 0.02562 * 3 2 1 28 28 H 1.08000 * 120.40895 * 180.02562 * 4 3 2 29 29 H 1.08994 * 109.47355 * 180.02562 * 13 11 10 30 30 H 1.09001 * 109.47563 * 300.00327 * 13 11 10 31 31 H 1.09003 * 109.46842 * 59.99793 * 13 11 10 32 32 H 0.96993 * 119.99947 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2092 1.1963 0.0000 4 6 3.5953 1.1511 0.0005 5 7 4.2019 -0.0235 0.0065 6 6 3.5012 -1.1479 0.0009 7 6 4.2182 -2.4489 0.0015 8 7 3.6715 -3.6358 0.0020 9 8 4.5315 -4.4911 0.0029 10 6 5.7415 -3.9233 0.0037 11 6 7.0670 -4.6403 0.0055 12 1 7.8755 -3.9092 0.0062 13 6 7.1710 -5.5168 1.2552 14 6 7.1723 -5.5045 -1.2244 15 1 6.3608 -5.5316 -1.9365 16 6 8.3048 -6.2607 -1.4408 17 7 9.2933 -6.2274 -0.5739 18 14 8.4356 -7.3316 -2.9658 19 1 7.1987 -7.1925 -3.7759 20 1 9.6067 -6.9035 -3.7722 21 1 8.6049 -8.7503 -2.5613 22 7 5.5584 -2.6263 0.0026 23 7 2.1760 -1.1400 0.0005 24 1 -0.3633 0.0003 1.0277 25 1 -0.3633 0.8898 -0.5141 26 1 -0.3634 -0.8902 -0.5135 27 1 1.6880 2.1422 0.0004 28 1 4.1721 2.0642 0.0010 29 1 8.1298 -6.0350 1.2568 30 1 7.0948 -4.8917 2.1449 31 1 6.3624 -6.2478 1.2545 32 1 10.0900 -6.7591 -0.7263 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000596597703.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:38:46 Heat of formation + Delta-G solvation = 111.838170 kcal Electronic energy + Delta-G solvation = -18330.894300 eV Core-core repulsion = 15295.153042 eV Total energy + Delta-G solvation = -3035.741258 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 260.101 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -44.86220 -41.13307 -35.49222 -34.91870 -34.45553 -32.93254 -31.66430 -29.67115 -28.80419 -25.68100 -25.37857 -23.84553 -22.98070 -22.22931 -20.34849 -17.64029 -17.59268 -17.21006 -16.24037 -15.99844 -15.51746 -15.24947 -14.93901 -14.08821 -13.76114 -13.40025 -13.34088 -12.93120 -12.60936 -11.94983 -11.74451 -11.40325 -11.13029 -11.07903 -11.02481 -10.72132 -10.67053 -10.45047 -10.33479 -10.11484 -9.86266 -9.34915 -9.31669 -8.85883 -8.56826 -6.21247 -4.30483 0.40743 0.93670 1.96361 2.82429 3.11856 3.24255 3.32437 3.37869 3.72022 3.77305 3.79089 4.23881 4.30837 4.58092 4.83397 4.85933 4.93914 5.13261 5.16904 5.23827 5.50132 5.65483 5.67493 6.12604 6.38657 6.51464 6.62966 6.80708 6.86476 6.89253 7.38985 7.63025 7.80963 7.91355 8.00616 8.68720 8.83048 9.35849 10.85069 Molecular weight = 260.10amu Principal moments of inertia in cm(-1) A = 0.038296 B = 0.004266 C = 0.004208 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 730.967965 B = 6562.345929 C = 6652.519832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C 0.175 3.825 3 C -0.228 4.228 4 C 0.153 3.847 5 N -0.483 5.483 6 C 0.419 3.581 7 C 0.198 3.802 8 N -0.358 5.358 9 O 0.088 5.912 10 C 0.243 3.757 11 C 0.125 3.875 12 H 0.079 0.921 13 C -0.139 4.139 14 C -0.524 4.524 15 H 0.064 0.936 16 C 0.071 3.929 17 N -0.884 5.884 18 Si 0.904 3.096 19 H -0.271 1.271 20 H -0.281 1.281 21 H -0.280 1.280 22 N -0.477 5.477 23 N -0.494 5.494 24 H 0.086 0.914 25 H 0.082 0.918 26 H 0.084 0.916 27 H 0.151 0.849 28 H 0.176 0.824 29 H 0.102 0.898 30 H 0.018 0.982 31 H 0.040 0.960 32 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.625 12.425 2.157 17.845 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.028 3.972 3 C -0.251 4.251 4 C -0.013 4.013 5 N -0.198 5.198 6 C 0.151 3.849 7 C -0.073 4.073 8 N -0.065 5.065 9 O 0.024 5.976 10 C 0.024 3.976 11 C 0.105 3.895 12 H 0.096 0.904 13 C -0.198 4.198 14 C -0.562 4.562 15 H 0.082 0.918 16 C -0.133 4.133 17 N -0.521 5.521 18 Si 0.731 3.269 19 H -0.196 1.196 20 H -0.207 1.207 21 H -0.206 1.206 22 N -0.210 5.210 23 N -0.211 5.211 24 H 0.105 0.895 25 H 0.101 0.899 26 H 0.103 0.897 27 H 0.169 0.831 28 H 0.193 0.807 29 H 0.120 0.880 30 H 0.037 0.963 31 H 0.059 0.941 32 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -12.714 11.811 2.198 17.492 hybrid contribution -0.179 0.276 -0.821 0.885 sum -12.892 12.087 1.377 17.726 Atomic orbital electron populations 1.20794 0.87362 1.04246 1.03839 1.21772 0.97792 0.87666 0.90005 1.22880 0.96703 1.00506 1.04974 1.23342 0.92031 0.95916 0.90035 1.68318 1.40965 0.98068 1.12441 1.19014 0.85015 0.88530 0.92297 1.22492 0.87775 0.90938 1.06132 1.74923 1.14359 0.98353 1.18880 1.85317 1.14248 1.33120 1.64890 1.30330 0.91418 0.86648 0.89169 1.17900 0.80243 0.94256 0.97140 0.90379 1.21868 1.04762 0.99124 0.94027 1.20916 1.03573 1.26303 1.05428 0.91804 1.24873 0.95050 0.96356 0.96981 1.69860 1.06546 1.40535 1.35159 0.86326 0.78293 0.79920 0.82327 1.19560 1.20726 1.20619 1.72174 1.11996 1.14784 1.22052 1.68111 1.08433 1.30783 1.13726 0.89518 0.89916 0.89677 0.83091 0.80676 0.87958 0.96317 0.94064 0.92367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.81 10.22 36.00 0.37 -0.45 16 2 C 0.17 2.11 6.82 -82.26 -0.56 1.55 16 3 C -0.23 -2.20 9.86 -39.24 -0.39 -2.59 16 4 C 0.15 1.79 11.30 -17.23 -0.19 1.60 16 5 N -0.48 -8.34 10.34 -11.11 -0.11 -8.46 16 6 C 0.42 8.05 7.60 -156.99 -1.19 6.85 16 7 C 0.20 4.40 7.99 -156.15 -1.25 3.15 16 8 N -0.36 -8.04 12.16 30.95 0.38 -7.66 16 9 O 0.09 2.03 11.29 18.05 0.20 2.23 16 10 C 0.24 5.72 6.94 -12.99 -0.09 5.63 16 11 C 0.12 3.07 2.77 -92.93 -0.26 2.81 16 12 H 0.08 2.03 8.14 -51.93 -0.42 1.60 16 13 C -0.14 -3.17 8.95 37.16 0.33 -2.83 16 14 C -0.52 -13.80 8.55 -34.44 -0.29 -14.10 16 15 H 0.06 1.70 7.74 -52.49 -0.41 1.30 16 16 C 0.07 1.84 5.30 -17.82 -0.09 1.75 16 17 N -0.88 -23.50 11.32 55.43 0.63 -22.88 16 18 Si 0.90 20.43 29.54 -169.99 -5.02 15.41 16 19 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 20 H -0.28 -6.33 7.11 56.52 0.40 -5.92 16 21 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 22 N -0.48 -11.24 11.55 -9.90 -0.11 -11.35 16 23 N -0.49 -8.38 10.27 -7.36 -0.08 -8.46 16 24 H 0.09 0.57 8.14 -51.93 -0.42 0.14 16 25 H 0.08 0.40 8.10 -51.93 -0.42 -0.02 16 26 H 0.08 0.73 8.14 -51.93 -0.42 0.30 16 27 H 0.15 0.80 8.06 -52.49 -0.42 0.37 16 28 H 0.18 1.32 8.06 -52.49 -0.42 0.90 16 29 H 0.10 2.49 6.07 -51.93 -0.32 2.17 16 30 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 16 31 H 0.04 0.89 8.14 -51.93 -0.42 0.47 16 32 H 0.27 6.71 8.31 -40.82 -0.34 6.37 16 LS Contribution 291.13 15.07 4.39 4.39 Total: -1.00 -30.77 291.13 -6.59 -37.35 By element: Atomic # 1 Polarization: -0.71 SS G_CDS: -3.24 Total: -3.95 kcal Atomic # 6 Polarization: 7.00 SS G_CDS: -3.62 Total: 3.38 kcal Atomic # 7 Polarization: -59.51 SS G_CDS: 0.70 Total: -58.81 kcal Atomic # 8 Polarization: 2.03 SS G_CDS: 0.20 Total: 2.23 kcal Atomic # 14 Polarization: 20.43 SS G_CDS: -5.02 Total: 15.41 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -30.77 -6.59 -37.35 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000596597703.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.192 kcal (2) G-P(sol) polarization free energy of solvation -30.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.354 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds