Wall clock time and date at job start Mon Mar 30 2020 05:21:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39728 * 120.06862 * 260.27861 * 3 2 1 5 5 C 1.37857 * 120.02877 * 179.79359 * 4 3 2 6 6 C 1.38748 * 120.17819 * 0.45795 * 5 4 3 7 7 O 1.35862 * 119.92897 * 179.76680 * 6 5 4 8 8 C 1.42895 * 117.00288 * 0.03011 * 7 6 5 9 9 C 1.50694 * 109.46939 * 179.97438 * 8 7 6 10 10 O 1.21290 * 120.00588 * 359.97438 * 9 8 7 11 11 N 1.34784 * 119.99770 * 179.97438 * 9 8 7 12 12 C 1.37105 * 119.99805 * 179.97438 * 11 9 8 13 13 H 1.07998 * 120.00107 * 0.02562 * 12 11 9 14 14 C 1.38952 * 119.99711 * 180.02562 * 12 11 9 15 15 N 1.31408 * 119.99735 * 179.97438 * 14 12 11 16 16 Si 1.86803 * 120.00159 * 0.02562 * 14 12 11 17 17 H 1.48496 * 109.47293 * 89.99934 * 16 14 12 18 18 H 1.48499 * 109.47144 * 210.00332 * 16 14 12 19 19 H 1.48503 * 109.46924 * 329.99811 * 16 14 12 20 20 C 1.39529 * 120.13511 * 359.79468 * 6 5 4 21 21 N 1.39977 * 120.01189 * 179.97438 * 20 6 5 22 22 C 1.38334 * 119.97216 * 359.97438 * 20 6 5 23 23 H 1.08001 * 119.98322 * 0.02562 * 4 3 2 24 24 H 1.08008 * 119.91422 * 180.21236 * 5 4 3 25 25 H 1.09003 * 109.46838 * 299.99877 * 8 7 6 26 26 H 1.08997 * 109.47566 * 59.99330 * 8 7 6 27 27 H 0.96998 * 120.00175 * 0.02562 * 11 9 8 28 28 H 0.96999 * 120.00342 * 179.97438 * 15 14 12 29 29 H 0.97001 * 120.00310 * 179.97438 * 21 20 6 30 30 H 0.97007 * 120.00540 * 359.97438 * 21 20 6 31 31 H 1.07995 * 120.08883 * 179.97438 * 22 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2680 0.2051 1.1919 5 6 4.6465 0.2014 1.1917 6 6 5.3433 0.0042 0.0081 7 8 6.7019 0.0062 0.0130 8 6 7.3459 0.2163 1.2711 9 6 8.8406 0.1853 1.0817 10 8 9.3084 0.0010 -0.0221 11 7 9.6576 0.3625 2.1389 12 6 11.0175 0.3338 1.9666 13 1 11.4340 0.1697 0.9837 14 6 11.8599 0.5159 3.0566 15 7 13.1632 0.4880 2.8915 16 14 11.1395 0.7991 4.7567 17 1 10.9492 -0.5069 5.4375 18 1 12.0670 1.6420 5.5532 19 1 9.8296 1.4873 4.6309 20 6 4.6515 -0.1954 -1.1871 21 7 5.3570 -0.3935 -2.3797 22 6 3.2682 -0.1975 -1.1929 23 1 2.7287 0.3625 2.1143 24 1 5.1857 0.3562 2.1146 25 1 7.0502 1.1853 1.6733 26 1 7.0517 -0.5705 1.9658 27 1 9.2836 0.5095 3.0217 28 1 13.7513 0.6154 3.6523 29 1 4.8760 -0.5327 -3.2104 30 1 6.3271 -0.3916 -2.3755 31 1 2.7309 -0.3515 -2.1169 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042410787.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:21:59 Heat of formation + Delta-G solvation = -11.243716 kcal Electronic energy + Delta-G solvation = -17977.537451 eV Core-core repulsion = 14838.740299 eV Total energy + Delta-G solvation = -3138.797152 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 261.090 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.46846 -38.68944 -37.51774 -36.34853 -34.56446 -34.12347 -31.84881 -30.69151 -29.20098 -28.14790 -24.77571 -23.33135 -22.61359 -19.69232 -19.04979 -18.59145 -18.08665 -17.18036 -16.07409 -15.99142 -15.50337 -15.23997 -14.81426 -14.25697 -14.23699 -13.90977 -13.69796 -13.57891 -13.16667 -12.75400 -12.55889 -12.46902 -12.28609 -12.07111 -11.34615 -11.29329 -10.94083 -10.77087 -10.69731 -10.09759 -9.72459 -8.76381 -8.71259 -8.34030 -7.44484 -6.43379 -3.96621 0.70537 1.27503 2.53172 2.85187 2.92837 2.93887 2.99026 3.09123 3.49989 3.63504 3.76251 3.94034 3.99288 4.44268 4.75005 4.82417 4.98781 5.05390 5.19042 5.32297 5.44258 5.55698 5.62956 5.66157 6.02454 6.16429 6.37731 7.06318 7.35680 7.39641 7.52468 7.74317 7.96434 8.43208 8.79640 9.25293 9.60857 10.68965 Molecular weight = 261.09amu Principal moments of inertia in cm(-1) A = 0.036070 B = 0.003908 C = 0.003533 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 776.078839 B = 7163.289831 C = 7924.224268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.266 3.734 3 C -0.031 4.031 4 C -0.083 4.083 5 C -0.173 4.173 6 C 0.096 3.904 7 O -0.282 6.282 8 C 0.050 3.950 9 C 0.448 3.552 10 O -0.557 6.557 11 N -0.579 5.579 12 C -0.309 4.309 13 H 0.122 0.878 14 C 0.045 3.955 15 N -0.875 5.875 16 Si 0.880 3.120 17 H -0.269 1.269 18 H -0.275 1.275 19 H -0.268 1.268 20 C 0.197 3.803 21 N -0.869 5.869 22 C -0.126 4.126 23 H 0.131 0.869 24 H 0.140 0.860 25 H 0.081 0.919 26 H 0.081 0.919 27 H 0.372 0.628 28 H 0.276 0.724 29 H 0.398 0.602 30 H 0.412 0.588 31 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.810 -0.327 -1.847 16.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.048 4.048 3 C -0.035 4.035 4 C -0.106 4.106 5 C -0.193 4.193 6 C 0.045 3.955 7 O -0.193 6.193 8 C -0.029 4.029 9 C 0.233 3.767 10 O -0.439 6.439 11 N -0.219 5.219 12 C -0.437 4.437 13 H 0.139 0.861 14 C -0.159 4.159 15 N -0.514 5.514 16 Si 0.706 3.294 17 H -0.194 1.194 18 H -0.200 1.200 19 H -0.194 1.194 20 C 0.091 3.909 21 N -0.410 5.410 22 C -0.152 4.152 23 H 0.149 0.851 24 H 0.158 0.842 25 H 0.099 0.901 26 H 0.099 0.901 27 H 0.206 0.794 28 H 0.086 0.914 29 H 0.226 0.774 30 H 0.243 0.757 31 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -17.859 -0.459 -2.641 18.059 hybrid contribution 0.199 0.254 1.412 1.449 sum -17.660 -0.205 -1.229 17.704 Atomic orbital electron populations 1.81234 1.12191 1.09838 1.07772 1.25712 0.92617 0.93157 0.93350 1.15549 0.83896 1.09382 0.94694 1.20668 0.93204 1.00121 0.96579 1.21003 0.94540 1.06424 0.97324 1.18886 0.83343 1.00235 0.93021 1.86085 1.14668 1.86262 1.32321 1.22546 0.93646 1.02011 0.84717 1.19166 0.86090 0.85511 0.85927 1.90602 1.76298 1.52676 1.24321 1.42032 1.07154 1.64924 1.07824 1.19418 0.78198 1.47345 0.98762 0.86056 1.25048 0.95195 0.97294 0.98382 1.69609 1.02027 1.47826 1.31905 0.86670 0.79242 0.79143 0.84352 1.19412 1.19972 1.19375 1.16851 0.90088 0.98491 0.85448 1.42398 1.09986 1.82472 1.06161 1.20255 0.90910 1.06440 0.97608 0.85129 0.84240 0.90063 0.90057 0.79448 0.91354 0.77391 0.75718 0.84741 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -5.65 18.54 41.83 0.78 -4.88 16 2 C 0.27 2.91 15.32 -22.47 -0.34 2.57 16 3 C -0.03 -0.30 5.74 -106.85 -0.61 -0.91 16 4 C -0.08 -0.75 9.74 -39.16 -0.38 -1.13 16 5 C -0.17 -1.73 9.01 -39.53 -0.36 -2.09 16 6 C 0.10 1.18 6.71 -38.91 -0.26 0.92 16 7 O -0.28 -4.35 8.90 -39.22 -0.35 -4.70 16 8 C 0.05 0.74 5.22 36.00 0.19 0.93 16 9 C 0.45 9.56 7.86 -10.99 -0.09 9.47 16 10 O -0.56 -14.47 16.07 -14.36 -0.23 -14.71 16 11 N -0.58 -12.84 5.09 -10.96 -0.06 -12.89 16 12 C -0.31 -8.31 10.16 -14.93 -0.15 -8.46 16 13 H 0.12 3.76 7.39 -52.49 -0.39 3.37 16 14 C 0.04 1.17 5.50 -17.47 -0.10 1.07 16 15 N -0.87 -24.50 13.96 55.50 0.77 -23.73 16 16 Si 0.88 18.14 27.74 -169.99 -4.71 13.42 16 17 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 18 H -0.27 -5.73 7.11 56.52 0.40 -5.33 16 19 H -0.27 -4.93 6.52 56.52 0.37 -4.56 16 20 C 0.20 2.14 6.76 -83.62 -0.57 1.58 16 21 N -0.87 -8.46 9.09 32.48 0.30 -8.17 16 22 C -0.13 -1.17 9.59 -38.99 -0.37 -1.54 16 23 H 0.13 0.92 8.06 -52.49 -0.42 0.50 16 24 H 0.14 1.15 6.27 -52.48 -0.33 0.82 16 25 H 0.08 0.98 7.65 -51.93 -0.40 0.59 16 26 H 0.08 0.97 7.65 -51.93 -0.40 0.58 16 27 H 0.37 7.01 5.76 -40.82 -0.24 6.78 16 28 H 0.28 7.11 8.31 -40.82 -0.34 6.77 16 29 H 0.40 2.72 8.84 -40.82 -0.36 2.36 16 30 H 0.41 4.66 8.18 -40.82 -0.33 4.33 16 31 H 0.13 0.98 8.06 -52.49 -0.42 0.56 16 LS Contribution 287.91 15.07 4.34 4.34 Total: -1.00 -32.51 287.91 -4.66 -37.17 By element: Atomic # 1 Polarization: 14.18 SS G_CDS: -2.46 Total: 11.73 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: -3.04 Total: 2.41 kcal Atomic # 7 Polarization: -51.45 SS G_CDS: 1.79 Total: -49.67 kcal Atomic # 8 Polarization: -18.82 SS G_CDS: -0.58 Total: -19.40 kcal Atomic # 14 Polarization: 18.14 SS G_CDS: -4.71 Total: 13.42 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -32.51 -4.66 -37.17 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042410787.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.930 kcal (2) G-P(sol) polarization free energy of solvation -32.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds