Wall clock time and date at job start Mon Mar 30 2020 05:22:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46510 * 1 3 3 C 1.46497 * 119.99865 * 2 1 4 4 C 1.50696 * 109.47221 * 270.00085 * 3 2 1 5 5 H 1.08001 * 119.99837 * 359.97438 * 4 3 2 6 6 C 1.37871 * 120.00199 * 180.28108 * 4 3 2 7 7 N 1.31519 * 120.00151 * 359.72304 * 6 4 3 8 8 Si 1.86807 * 120.00510 * 179.72422 * 6 4 3 9 9 H 1.48501 * 109.46858 * 89.99453 * 8 6 4 10 10 H 1.48494 * 109.47070 * 209.99818 * 8 6 4 11 11 H 1.48502 * 109.46372 * 329.99672 * 8 6 4 12 12 C 1.34772 * 119.99689 * 180.02562 * 2 1 3 13 13 O 1.21277 * 119.99756 * 174.78403 * 12 2 1 14 14 C 1.50696 * 120.00133 * 354.78095 * 12 2 1 15 15 C 1.52998 * 115.55196 * 79.29056 * 14 12 2 16 16 C 1.53009 * 117.49883 * 293.62071 * 14 12 2 17 17 C 1.53003 * 117.50037 * 224.99863 * 14 12 2 18 18 Cl 1.80298 * 117.50093 * 214.97854 * 17 14 12 19 19 Cl 1.80299 * 117.49766 * 0.02562 * 17 14 12 20 20 H 1.08993 * 109.46932 * 95.34340 * 1 2 3 21 21 H 1.08999 * 109.47110 * 215.34600 * 1 2 3 22 22 H 1.09002 * 109.46735 * 335.34739 * 1 2 3 23 23 H 1.09002 * 109.46567 * 150.00045 * 3 2 1 24 24 H 1.08997 * 109.47131 * 30.00252 * 3 2 1 25 25 H 0.96999 * 120.00067 * 180.02562 * 7 6 4 26 26 H 1.09009 * 109.46956 * 60.81329 * 15 14 12 27 27 H 1.09006 * 109.47516 * 180.80956 * 15 14 12 28 28 H 1.09002 * 109.47351 * 300.81498 * 15 14 12 29 29 H 1.08995 * 117.49621 * 359.97438 * 16 14 12 30 30 H 1.08998 * 117.49724 * 144.99928 * 16 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4487 1.7038 -1.4208 5 1 2.0981 1.0958 -2.2417 6 6 3.1315 2.8747 -1.6727 7 7 3.5589 3.6149 -0.6731 8 14 3.4496 3.4102 -3.4339 9 1 2.3239 4.2565 -3.9049 10 1 4.7129 4.1883 -3.4942 11 1 3.5647 2.2112 -4.3025 12 6 2.1389 -1.1672 -0.0005 13 8 3.3479 -1.1693 -0.0960 14 6 1.3901 -2.4696 0.1176 15 6 0.7336 -2.9725 -1.1696 16 6 0.6670 -2.7517 1.4362 17 6 1.9439 -3.5178 1.0848 18 17 1.7735 -5.2516 0.6204 19 17 3.4423 -3.0999 1.9965 20 1 -0.3633 -0.0957 -1.0231 21 1 -0.3633 -0.8382 0.5945 22 1 -0.3633 0.9340 0.4287 23 1 3.1500 1.1383 0.5139 24 1 1.6085 2.0283 0.5139 25 1 4.0389 4.4389 -0.8504 26 1 1.4997 -3.1398 -1.9268 27 1 0.2104 -3.9076 -0.9694 28 1 0.0231 -2.2285 -1.5299 29 1 0.7333 -1.9955 2.2183 30 1 -0.2763 -3.2956 1.3866 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000073491995.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:22:04 Heat of formation + Delta-G solvation = -17.489948 kcal Electronic energy + Delta-G solvation = -16365.316915 eV Core-core repulsion = 13441.776419 eV Total energy + Delta-G solvation = -2923.540496 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 265.038 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.85327 -37.21930 -35.93437 -35.39814 -34.85697 -32.55338 -28.87090 -27.84546 -26.01622 -23.79702 -22.49986 -21.29936 -18.26987 -16.74431 -16.51444 -15.66543 -15.57381 -14.58201 -14.34752 -13.81167 -13.43765 -13.10303 -12.79792 -12.48480 -12.20920 -12.13247 -11.95726 -11.86439 -11.48814 -11.23709 -11.09480 -10.91036 -10.77453 -10.59938 -10.31046 -10.14926 -9.76072 -9.63915 -8.92582 -8.44777 -7.70093 -6.05782 -4.10316 1.18854 2.20726 2.99393 3.22793 3.29640 3.36703 3.41348 3.77766 4.12517 4.28635 4.43683 4.89893 5.01920 5.28320 5.30779 5.49871 5.59799 5.65336 5.70691 5.89889 6.05225 6.18205 6.98372 7.37767 7.48309 7.90003 8.20338 8.31261 8.85651 9.00809 9.54740 11.02380 Molecular weight = 265.04amu Principal moments of inertia in cm(-1) A = 0.031444 B = 0.005639 C = 0.005452 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 890.245344 B = 4964.388578 C = 5134.803300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.082 3.918 2 N -0.594 5.594 3 C 0.248 3.752 4 C -0.525 4.525 5 H 0.057 0.943 6 C 0.061 3.939 7 N -0.895 5.895 8 Si 0.898 3.102 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 C 0.536 3.464 13 O -0.510 6.510 14 C -0.115 4.115 15 C -0.116 4.116 16 C -0.134 4.134 17 C 0.025 3.975 18 Cl -0.098 7.098 19 Cl -0.071 7.071 20 H 0.050 0.950 21 H 0.056 0.944 22 H 0.071 0.929 23 H 0.043 0.957 24 H 0.034 0.966 25 H 0.263 0.737 26 H 0.075 0.925 27 H 0.071 0.929 28 H 0.078 0.922 29 H 0.123 0.877 30 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.524 -13.747 4.144 17.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.326 5.326 3 C 0.129 3.871 4 C -0.564 4.564 5 H 0.076 0.924 6 C -0.141 4.141 7 N -0.534 5.534 8 Si 0.725 3.275 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.199 1.199 12 C 0.319 3.681 13 O -0.385 6.385 14 C -0.120 4.120 15 C -0.173 4.173 16 C -0.172 4.172 17 C -0.027 4.027 18 Cl -0.071 7.071 19 Cl -0.044 7.044 20 H 0.068 0.932 21 H 0.075 0.925 22 H 0.090 0.910 23 H 0.061 0.939 24 H 0.052 0.948 25 H 0.073 0.927 26 H 0.094 0.906 27 H 0.090 0.910 28 H 0.097 0.903 29 H 0.141 0.859 30 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -8.645 -13.645 4.176 16.685 hybrid contribution 0.254 0.246 -0.931 0.996 sum -8.391 -13.399 3.245 16.140 Atomic orbital electron populations 1.21721 0.81360 1.02048 1.01032 1.48056 1.06216 1.07251 1.71097 1.19349 0.92476 0.77634 0.97665 1.21406 1.36361 1.06373 0.92243 0.92436 1.24928 0.95307 0.96411 0.97431 1.69927 1.38317 1.14450 1.30739 0.86500 0.77692 0.78593 0.84673 1.20640 1.21077 1.19880 1.18883 0.87302 0.83162 0.78758 1.90746 1.13307 1.86153 1.48265 1.22460 1.00034 0.95101 0.94387 1.21412 1.00832 1.01375 0.93676 1.24151 0.94290 1.00513 0.98197 1.26713 0.90449 0.82665 1.02873 1.98720 1.97227 1.18493 1.92638 1.98779 1.38239 1.92285 1.75098 0.93172 0.92538 0.91044 0.93880 0.94793 0.92698 0.90647 0.90990 0.90294 0.85850 0.85623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.22 9.63 59.85 0.58 1.80 16 2 N -0.59 -12.09 2.86 -182.96 -0.52 -12.61 16 3 C 0.25 6.33 5.16 -5.20 -0.03 6.30 16 4 C -0.52 -14.72 9.39 -34.44 -0.32 -15.04 16 5 H 0.06 1.61 7.81 -52.49 -0.41 1.20 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.90 -26.44 13.29 55.43 0.74 -25.71 16 8 Si 0.90 21.81 29.54 -169.99 -5.02 16.79 16 9 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 10 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 11 H -0.27 -6.66 7.11 56.52 0.40 -6.26 16 12 C 0.54 10.80 6.42 -10.99 -0.07 10.73 16 13 O -0.51 -12.65 15.09 5.56 0.08 -12.56 16 14 C -0.12 -1.69 1.44 -155.66 -0.22 -1.91 16 15 C -0.12 -1.41 9.15 37.16 0.34 -1.07 16 16 C -0.13 -1.50 7.79 -26.72 -0.21 -1.70 16 17 C 0.03 0.35 3.59 -26.73 -0.10 0.26 16 18 Cl -0.10 -1.20 27.69 -51.86 -1.44 -2.64 16 19 Cl -0.07 -1.18 27.19 -51.86 -1.41 -2.59 16 20 H 0.05 0.71 7.67 -51.93 -0.40 0.31 16 21 H 0.06 0.64 5.49 -51.93 -0.29 0.36 16 22 H 0.07 1.02 7.83 -51.93 -0.41 0.62 16 23 H 0.04 1.25 7.50 -51.93 -0.39 0.86 16 24 H 0.03 0.87 7.86 -51.93 -0.41 0.46 16 25 H 0.26 7.35 8.31 -40.82 -0.34 7.02 16 26 H 0.07 1.01 8.14 -51.92 -0.42 0.59 16 27 H 0.07 0.71 7.07 -51.93 -0.37 0.34 16 28 H 0.08 0.89 7.03 -51.93 -0.36 0.52 16 29 H 0.12 1.37 8.13 -51.93 -0.42 0.95 16 30 H 0.13 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 285.99 15.07 4.31 4.31 Total: -1.00 -32.31 285.99 -6.82 -39.13 By element: Atomic # 1 Polarization: -1.69 SS G_CDS: -3.43 Total: -5.12 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -0.13 Total: 1.00 kcal Atomic # 7 Polarization: -38.53 SS G_CDS: 0.21 Total: -38.32 kcal Atomic # 8 Polarization: -12.65 SS G_CDS: 0.08 Total: -12.56 kcal Atomic # 14 Polarization: 21.81 SS G_CDS: -5.02 Total: 16.79 kcal Atomic # 17 Polarization: -2.38 SS G_CDS: -2.85 Total: -5.23 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -32.31 -6.82 -39.13 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000073491995.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.645 kcal (2) G-P(sol) polarization free energy of solvation -32.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.821 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds