Wall clock time and date at job start Mon Mar 30 2020 05:11:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.35311 * 126.12159 * 2 1 4 4 C 1.50702 * 126.04475 * 359.93966 * 3 2 1 5 5 N 1.46498 * 109.46991 * 80.00054 * 4 3 2 6 6 C 1.34774 * 119.99958 * 180.02562 * 5 4 3 7 7 O 1.21447 * 119.99873 * 359.97438 * 6 5 4 8 8 C 1.48829 * 120.00267 * 180.02562 * 6 5 4 9 9 O 1.21504 * 119.99629 * 359.97438 * 8 6 5 10 10 N 1.34771 * 120.00223 * 179.97438 * 8 6 5 11 11 C 1.36125 * 120.00018 * 179.97438 * 10 8 6 12 12 H 1.07997 * 120.00314 * 0.02562 * 11 10 8 13 13 C 1.39583 * 119.99906 * 180.02562 * 11 10 8 14 14 N 1.31015 * 120.00313 * 0.02562 * 13 11 10 15 15 Si 1.86801 * 120.00067 * 180.02562 * 13 11 10 16 16 H 1.48499 * 109.47152 * 89.99866 * 15 13 11 17 17 H 1.48500 * 109.47418 * 210.00445 * 15 13 11 18 18 H 1.48508 * 109.47078 * 330.00630 * 15 13 11 19 19 C 1.39872 * 107.91683 * 179.97438 * 3 2 1 20 20 N 1.30828 * 108.20306 * 359.97438 * 19 3 2 21 21 N 1.34940 * 126.13005 * 179.68744 * 2 1 3 22 22 C 1.46503 * 126.03754 * 0.03469 * 21 2 1 23 23 H 1.08999 * 109.47015 * 90.00502 * 1 2 3 24 24 H 1.09000 * 109.46646 * 209.99654 * 1 2 3 25 25 H 1.09000 * 109.47248 * 330.00372 * 1 2 3 26 26 H 1.09004 * 109.47120 * 200.00381 * 4 3 2 27 27 H 1.09004 * 109.47157 * 320.00123 * 4 3 2 28 28 H 0.96996 * 120.00044 * 0.02562 * 5 4 3 29 29 H 0.97003 * 120.00449 * 0.02562 * 10 8 6 30 30 H 0.96999 * 120.00373 * 179.97438 * 14 13 11 31 31 H 1.08009 * 125.89832 * 179.97438 * 19 3 2 32 32 H 1.08999 * 109.47072 * 89.99750 * 22 21 2 33 33 H 1.08995 * 109.47552 * 210.00247 * 22 21 2 34 34 H 1.09005 * 109.47194 * 330.00181 * 22 21 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3047 1.0930 0.0000 4 6 1.8432 2.5276 -0.0013 5 7 1.4642 2.9198 1.3584 6 6 1.0170 4.1681 1.5997 7 8 0.9286 4.9679 0.6900 8 6 0.6325 4.5668 2.9811 9 8 0.7213 3.7668 3.8912 10 7 0.1858 5.8152 3.2224 11 6 -0.1664 6.1797 4.4858 12 1 -0.0875 5.4686 5.2948 13 6 -0.6296 7.4725 4.7357 14 7 -0.7258 8.3351 3.7542 15 14 -1.1122 7.9730 6.4695 16 1 0.0722 8.5287 7.1721 17 1 -2.1800 9.0031 6.4083 18 1 -1.6124 6.7847 7.2066 19 6 3.6334 0.6560 0.0006 20 7 3.6334 -0.6523 0.0015 21 7 2.3027 -1.0899 0.0059 22 6 1.8541 -2.4845 0.0128 23 1 -0.3633 -0.0001 -1.0277 24 1 -0.3632 -0.8900 0.5138 25 1 -0.3634 0.8900 0.5138 26 1 2.6515 3.1690 -0.3526 27 1 0.9830 2.6320 -0.6627 28 1 1.5351 2.2812 2.0849 29 1 0.1145 6.4539 2.4958 30 1 -1.0481 9.2334 3.9278 31 1 4.5084 1.2893 0.0004 32 1 1.7433 -2.8356 -1.0131 33 1 2.5897 -3.1003 0.5302 34 1 0.8953 -2.5552 0.5266 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000226243293.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:11:55 Heat of formation + Delta-G solvation = 1.758329 kcal Electronic energy + Delta-G solvation = -19383.961606 eV Core-core repulsion = 16125.679398 eV Total energy + Delta-G solvation = -3258.282209 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 266.117 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.48744 -39.33826 -37.17256 -34.97466 -34.11088 -33.51644 -31.96979 -31.32676 -28.54797 -26.89782 -25.99734 -24.77310 -22.32230 -21.02903 -19.66900 -19.29328 -18.29207 -17.10968 -16.41620 -16.03165 -15.59705 -14.96449 -14.88391 -14.49706 -14.24197 -13.91798 -13.73986 -13.41834 -13.20993 -12.78254 -12.71113 -12.66015 -12.44407 -12.10859 -11.81201 -11.74592 -11.17858 -10.71538 -10.52253 -10.41196 -10.32574 -9.69298 -9.40715 -8.70101 -8.61464 -8.19425 -8.14707 -6.64261 -3.96674 1.66844 2.32403 2.50421 2.53864 3.16732 3.18200 3.23760 3.70190 4.11684 4.29971 4.33542 4.47311 4.82335 4.86564 4.97140 5.09013 5.13317 5.19953 5.24272 5.30948 5.39756 5.68942 5.80858 5.88452 6.10502 6.14235 6.49893 6.82672 6.86054 7.33645 7.55466 7.74597 7.95390 8.37049 8.68057 8.99658 9.35568 9.88768 10.50696 Molecular weight = 266.12amu Principal moments of inertia in cm(-1) A = 0.039954 B = 0.003597 C = 0.003497 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 700.631072 B = 7782.557398 C = 8003.987901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.107 3.893 3 C -0.258 4.258 4 C 0.202 3.798 5 N -0.711 5.711 6 C 0.512 3.488 7 O -0.548 6.548 8 C 0.395 3.605 9 O -0.598 6.598 10 N -0.500 5.500 11 C -0.306 4.306 12 H 0.112 0.888 13 C 0.031 3.969 14 N -0.870 5.870 15 Si 0.938 3.062 16 H -0.274 1.274 17 H -0.280 1.280 18 H -0.265 1.265 19 C 0.069 3.931 20 N -0.301 5.301 21 N -0.375 5.375 22 C 0.101 3.899 23 H 0.082 0.918 24 H 0.072 0.928 25 H 0.092 0.908 26 H 0.074 0.926 27 H 0.070 0.930 28 H 0.409 0.591 29 H 0.405 0.595 30 H 0.280 0.720 31 H 0.186 0.814 32 H 0.073 0.927 33 H 0.089 0.911 34 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.338 -15.982 -8.325 18.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.022 4.022 3 C -0.270 4.270 4 C 0.077 3.923 5 N -0.365 5.365 6 C 0.296 3.704 7 O -0.425 6.425 8 C 0.179 3.821 9 O -0.487 6.487 10 N -0.135 5.135 11 C -0.437 4.437 12 H 0.130 0.870 13 C -0.176 4.176 14 N -0.508 5.508 15 Si 0.764 3.236 16 H -0.199 1.199 17 H -0.206 1.206 18 H -0.189 1.189 19 C -0.118 4.118 20 N -0.122 5.122 21 N -0.158 5.158 22 C -0.041 4.041 23 H 0.101 0.899 24 H 0.090 0.910 25 H 0.111 0.889 26 H 0.092 0.908 27 H 0.088 0.912 28 H 0.245 0.755 29 H 0.240 0.760 30 H 0.090 0.910 31 H 0.202 0.798 32 H 0.092 0.908 33 H 0.107 0.893 34 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.948 -16.944 -8.428 19.153 hybrid contribution -0.620 1.010 0.637 1.345 sum 2.328 -15.934 -7.792 17.889 Atomic orbital electron populations 1.20555 0.87017 1.04498 1.03555 1.20965 0.94668 0.86995 0.99594 1.19848 0.92724 0.95073 1.19329 1.19385 0.99843 0.88962 0.84069 1.45855 1.66495 1.13640 1.10497 1.20672 0.77295 0.81926 0.90461 1.90690 1.53927 1.51151 1.46756 1.19013 0.90060 0.84964 0.88036 1.90580 1.61421 1.51446 1.45219 1.41561 1.50723 1.10183 1.11003 1.19871 1.40168 0.97322 0.86307 0.87039 1.25572 0.96365 0.95395 1.00263 1.69483 1.42639 1.06125 1.32538 0.85734 0.78433 0.78653 0.80799 1.19924 1.20552 1.18937 1.23823 0.97664 0.91934 0.98330 1.77380 0.96398 1.12945 1.25439 1.48431 1.04045 1.05960 1.57314 1.21839 1.01144 0.77838 1.03262 0.89899 0.90962 0.88911 0.90788 0.91155 0.75547 0.75988 0.90961 0.79760 0.90807 0.89253 0.89446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.86 9.90 36.01 0.36 -0.50 16 2 C 0.11 1.21 6.93 -82.27 -0.57 0.64 16 3 C -0.26 -3.26 5.47 -105.05 -0.57 -3.84 16 4 C 0.20 2.84 5.67 -5.19 -0.03 2.81 16 5 N -0.71 -12.21 5.54 -62.11 -0.34 -12.56 16 6 C 0.51 11.07 7.87 -11.88 -0.09 10.97 16 7 O -0.55 -12.73 16.47 5.41 0.09 -12.64 16 8 C 0.40 9.97 7.82 -11.88 -0.09 9.87 16 9 O -0.60 -16.10 16.03 5.36 0.09 -16.01 16 10 N -0.50 -13.41 5.25 -11.59 -0.06 -13.47 16 11 C -0.31 -8.46 9.67 -15.15 -0.15 -8.60 16 12 H 0.11 3.15 7.15 -52.49 -0.38 2.77 16 13 C 0.03 0.80 5.51 -17.40 -0.10 0.71 16 14 N -0.87 -23.35 13.03 55.53 0.72 -22.62 16 15 Si 0.94 20.11 29.56 -169.99 -5.02 15.09 16 16 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 17 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 18 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 19 C 0.07 0.86 11.96 -17.37 -0.21 0.65 16 20 N -0.30 -3.98 12.57 30.63 0.39 -3.59 16 21 N -0.38 -4.20 4.01 -63.88 -0.26 -4.45 16 22 C 0.10 0.67 11.27 59.85 0.67 1.35 16 23 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.07 0.49 7.07 -51.93 -0.37 0.12 16 25 H 0.09 0.95 7.89 -51.93 -0.41 0.54 16 26 H 0.07 1.03 8.14 -51.93 -0.42 0.61 16 27 H 0.07 0.97 8.13 -51.93 -0.42 0.55 16 28 H 0.41 6.96 7.92 -40.82 -0.32 6.64 16 29 H 0.40 10.92 7.35 -40.82 -0.30 10.62 16 30 H 0.28 6.96 8.30 -40.82 -0.34 6.62 16 31 H 0.19 1.84 8.06 -52.48 -0.42 1.42 16 32 H 0.07 0.39 8.14 -51.93 -0.42 -0.04 16 33 H 0.09 0.55 8.14 -51.93 -0.42 0.13 16 34 H 0.09 0.41 7.05 -51.93 -0.37 0.04 16 LS Contribution 307.33 15.07 4.63 4.63 Total: -1.00 -33.08 307.33 -4.36 -37.44 By element: Atomic # 1 Polarization: 17.95 SS G_CDS: -3.81 Total: 14.14 kcal Atomic # 6 Polarization: 14.83 SS G_CDS: -0.78 Total: 14.05 kcal Atomic # 7 Polarization: -57.14 SS G_CDS: 0.45 Total: -56.70 kcal Atomic # 8 Polarization: -28.83 SS G_CDS: 0.18 Total: -28.65 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.02 Total: 15.09 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -33.08 -4.36 -37.44 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000226243293.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.194 kcal (2) G-P(sol) polarization free energy of solvation -33.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.436 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds