Wall clock time and date at job start Mon Mar 30 2020 05:11:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.39869 * 125.89994 * 2 1 4 4 C 1.35319 * 107.92199 * 179.86733 * 3 2 1 5 5 C 1.50698 * 126.12548 * 180.14715 * 4 3 2 6 6 N 1.46506 * 109.46992 * 95.29120 * 5 4 3 7 7 C 1.34773 * 119.99784 * 179.97438 * 6 5 4 8 8 O 1.21440 * 120.00086 * 359.97438 * 7 6 5 9 9 C 1.48829 * 119.99853 * 179.97438 * 7 6 5 10 10 O 1.21499 * 120.00207 * 0.02562 * 9 7 6 11 11 N 1.34772 * 120.00260 * 180.02562 * 9 7 6 12 12 C 1.36118 * 120.00367 * 179.97438 * 11 9 7 13 13 H 1.07997 * 119.99697 * 0.02562 * 12 11 9 14 14 C 1.39588 * 119.99894 * 179.97438 * 12 11 9 15 15 N 1.31010 * 120.00419 * 0.02562 * 14 12 11 16 16 Si 1.86800 * 119.99690 * 180.02562 * 14 12 11 17 17 H 1.48504 * 109.47376 * 60.00506 * 16 14 12 18 18 H 1.48501 * 109.47002 * 180.02562 * 16 14 12 19 19 H 1.48498 * 109.47247 * 300.00248 * 16 14 12 20 20 N 1.34949 * 107.74072 * 0.38975 * 4 3 2 21 21 C 1.46499 * 126.03244 * 179.74834 * 20 4 3 22 22 N 1.30834 * 125.89652 * 180.31122 * 2 1 3 23 23 H 1.09002 * 109.47152 * 269.71476 * 1 2 3 24 24 H 1.09001 * 109.46980 * 149.71576 * 1 2 3 25 25 H 1.09004 * 109.47113 * 29.71557 * 1 2 3 26 26 H 1.08001 * 126.03471 * 359.97438 * 3 2 1 27 27 H 1.09003 * 109.46903 * 215.28425 * 5 4 3 28 28 H 1.08994 * 109.47583 * 335.28793 * 5 4 3 29 29 H 0.96999 * 119.99475 * 359.97438 * 6 5 4 30 30 H 0.97007 * 120.00093 * 0.02562 * 11 9 7 31 31 H 0.96996 * 120.00380 * 179.97438 * 15 14 12 32 32 H 1.08992 * 109.47808 * 269.98164 * 21 20 4 33 33 H 1.09003 * 109.47286 * 29.98436 * 21 20 4 34 34 H 1.09002 * 109.46991 * 149.97561 * 21 20 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3272 1.1330 0.0000 4 6 3.6143 0.7153 0.0030 5 6 4.8351 1.5989 0.0072 6 7 5.3017 1.7805 1.3840 7 6 6.3880 2.5384 1.6329 8 8 6.9804 3.0703 0.7159 9 6 6.8617 2.7234 3.0316 10 8 6.2693 2.1908 3.9491 11 7 7.9477 3.4816 3.2807 12 6 8.3806 3.6512 4.5600 13 1 7.8540 3.1778 5.3754 14 6 9.5058 4.4361 4.8177 15 7 10.1449 5.0099 3.8284 16 14 10.1003 4.6683 6.5733 17 1 10.4427 3.3472 7.1588 18 1 11.3033 5.5389 6.5775 19 1 9.0271 5.3038 7.3794 20 7 3.6087 -0.6341 -0.0039 21 6 4.7899 -1.5008 -0.0089 22 7 2.2741 -1.0598 -0.0058 23 1 -0.3633 -0.0051 1.0277 24 1 -0.3633 -0.8874 -0.5182 25 1 -0.3633 0.8926 -0.5094 26 1 1.9923 2.1598 -0.0004 27 1 5.6228 1.1330 -0.5848 28 1 4.5833 2.5686 -0.4220 29 1 4.8287 1.3554 2.1164 30 1 8.4205 3.9071 2.5482 31 1 10.9265 5.5557 4.0076 32 1 5.0823 -1.7108 -1.0376 33 1 5.6097 -1.0007 0.5069 34 1 4.5567 -2.4357 0.5007 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000390722035.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:11:58 Heat of formation + Delta-G solvation = 1.709090 kcal Electronic energy + Delta-G solvation = -19319.850758 eV Core-core repulsion = 16061.566414 eV Total energy + Delta-G solvation = -3258.284344 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 266.117 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.44659 -39.49868 -37.29913 -35.12197 -34.25493 -33.70808 -31.49369 -30.83788 -29.58111 -26.92651 -25.62754 -25.34691 -22.58223 -20.59357 -19.82006 -19.33967 -18.38620 -17.28850 -16.36792 -16.17625 -15.52063 -15.18459 -14.93395 -14.42386 -14.16211 -13.98577 -13.67103 -13.63254 -13.23870 -13.03460 -12.80238 -12.48329 -12.27543 -12.26676 -11.92767 -11.80664 -11.21017 -10.67933 -10.63985 -10.52782 -10.41698 -9.75396 -9.30428 -8.93804 -8.66624 -8.31932 -8.27731 -6.72008 -4.04222 1.59588 2.34412 2.36738 2.58926 3.13396 3.14310 3.16383 3.46969 4.03117 4.20580 4.31831 4.37390 4.83213 4.97122 5.02925 5.06443 5.13312 5.22395 5.30557 5.45918 5.51592 5.55214 5.69635 5.75311 5.98774 6.07835 6.55052 6.56743 6.84409 7.26223 7.58390 7.60394 7.77945 8.24739 8.51569 8.90328 9.25794 9.79413 10.42586 Molecular weight = 266.12amu Principal moments of inertia in cm(-1) A = 0.038694 B = 0.003543 C = 0.003481 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 723.446417 B = 7900.891905 C = 8040.781268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.067 3.933 3 C -0.249 4.249 4 C 0.070 3.930 5 C 0.185 3.815 6 N -0.714 5.714 7 C 0.516 3.484 8 O -0.544 6.544 9 C 0.392 3.608 10 O -0.597 6.597 11 N -0.496 5.496 12 C -0.307 4.307 13 H 0.113 0.887 14 C 0.032 3.968 15 N -0.867 5.867 16 Si 0.940 3.060 17 H -0.268 1.268 18 H -0.280 1.280 19 H -0.268 1.268 20 N -0.364 5.364 21 C 0.097 3.903 22 N -0.292 5.292 23 H 0.077 0.923 24 H 0.070 0.930 25 H 0.077 0.923 26 H 0.150 0.850 27 H 0.079 0.921 28 H 0.095 0.905 29 H 0.412 0.588 30 H 0.405 0.595 31 H 0.282 0.718 32 H 0.076 0.924 33 H 0.091 0.909 34 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.544 -7.691 -8.201 16.114 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C -0.098 4.098 3 C -0.279 4.279 4 C -0.058 4.058 5 C 0.060 3.940 6 N -0.369 5.369 7 C 0.301 3.699 8 O -0.420 6.420 9 C 0.176 3.824 10 O -0.486 6.486 11 N -0.130 5.130 12 C -0.437 4.437 13 H 0.130 0.870 14 C -0.175 4.175 15 N -0.505 5.505 16 Si 0.765 3.235 17 H -0.193 1.193 18 H -0.205 1.205 19 H -0.193 1.193 20 N -0.146 5.146 21 C -0.045 4.045 22 N -0.115 5.115 23 H 0.095 0.905 24 H 0.089 0.911 25 H 0.096 0.904 26 H 0.168 0.832 27 H 0.097 0.903 28 H 0.113 0.887 29 H 0.248 0.752 30 H 0.240 0.760 31 H 0.092 0.908 32 H 0.094 0.906 33 H 0.109 0.891 34 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -11.126 -8.886 -8.319 16.491 hybrid contribution 0.480 1.027 0.616 1.290 sum -10.646 -7.859 -7.704 15.312 Atomic orbital electron populations 1.20167 0.86578 1.03166 1.03030 1.22323 0.97002 0.90681 0.99817 1.21218 0.90719 1.00090 1.15851 1.21032 0.96866 0.84627 1.03258 1.19729 0.91003 0.98158 0.85118 1.45704 1.30522 1.52522 1.08190 1.20747 0.79953 0.78151 0.91080 1.90703 1.56353 1.48031 1.46944 1.18859 0.86608 0.89233 0.87654 1.90593 1.59008 1.54021 1.44967 1.41555 1.22485 1.38979 1.10003 1.19853 1.10210 1.28868 0.84785 0.86964 1.25597 0.95901 0.95485 1.00538 1.69468 1.19030 1.29486 1.32533 0.85769 0.78222 0.78800 0.80660 1.19342 1.20550 1.19314 1.48437 1.05578 1.04123 1.56509 1.21934 0.83939 0.95116 1.03484 1.77302 0.86235 1.22732 1.25243 0.90470 0.91064 0.90393 0.83208 0.90284 0.88684 0.75160 0.75967 0.90775 0.90573 0.89060 0.89059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.59 10.45 36.01 0.38 -0.22 16 2 C 0.07 0.83 7.22 -82.41 -0.59 0.23 16 3 C -0.25 -3.07 10.65 -40.01 -0.43 -3.49 16 4 C 0.07 0.90 6.30 -82.26 -0.52 0.38 16 5 C 0.19 2.47 5.61 -5.19 -0.03 2.44 16 6 N -0.71 -11.81 5.54 -62.11 -0.34 -12.16 16 7 C 0.52 10.75 7.87 -11.88 -0.09 10.66 16 8 O -0.54 -12.12 16.47 5.42 0.09 -12.03 16 9 C 0.39 9.66 7.82 -11.88 -0.09 9.57 16 10 O -0.60 -15.81 16.03 5.37 0.09 -15.72 16 11 N -0.50 -13.00 5.25 -11.59 -0.06 -13.06 16 12 C -0.31 -8.32 9.67 -15.15 -0.15 -8.46 16 13 H 0.11 3.11 7.15 -52.49 -0.38 2.73 16 14 C 0.03 0.82 5.51 -17.40 -0.10 0.72 16 15 N -0.87 -22.84 13.03 55.53 0.72 -22.11 16 16 Si 0.94 19.77 29.56 -169.99 -5.02 14.75 16 17 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 18 H -0.28 -5.73 7.11 56.52 0.40 -5.32 16 19 H -0.27 -5.59 7.11 56.52 0.40 -5.18 16 20 N -0.36 -4.68 4.01 -63.89 -0.26 -4.94 16 21 C 0.10 0.94 11.16 59.85 0.67 1.61 16 22 N -0.29 -4.05 12.58 33.67 0.42 -3.62 16 23 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.07 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 26 H 0.15 1.57 8.06 -52.49 -0.42 1.15 16 27 H 0.08 1.00 7.98 -51.93 -0.41 0.59 16 28 H 0.10 1.22 8.14 -51.93 -0.42 0.80 16 29 H 0.41 6.85 7.92 -40.82 -0.32 6.53 16 30 H 0.40 10.65 7.35 -40.82 -0.30 10.35 16 31 H 0.28 6.89 8.30 -40.82 -0.34 6.55 16 32 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16 33 H 0.09 0.88 7.78 -51.93 -0.40 0.48 16 34 H 0.09 0.80 8.14 -51.93 -0.42 0.37 16 LS Contribution 309.41 15.07 4.66 4.66 Total: -1.00 -31.81 309.41 -4.56 -36.37 By element: Atomic # 1 Polarization: 18.34 SS G_CDS: -3.91 Total: 14.43 kcal Atomic # 6 Polarization: 14.39 SS G_CDS: -0.95 Total: 13.44 kcal Atomic # 7 Polarization: -56.38 SS G_CDS: 0.49 Total: -55.89 kcal Atomic # 8 Polarization: -27.93 SS G_CDS: 0.18 Total: -27.75 kcal Atomic # 14 Polarization: 19.77 SS G_CDS: -5.02 Total: 14.75 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -31.81 -4.56 -36.37 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000390722035.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.083 kcal (2) G-P(sol) polarization free energy of solvation -31.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.374 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds