Wall clock time and date at job start Mon Mar 30 2020 04:43:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53007 * 109.46998 * 2 1 4 4 C 1.50693 * 109.47327 * 120.00094 * 2 1 3 5 5 N 1.30974 * 125.77605 * 299.97356 * 4 2 1 6 6 N 1.40062 * 108.47652 * 179.97438 * 5 4 2 7 7 C 1.46494 * 126.08484 * 179.97438 * 6 5 4 8 8 C 1.36091 * 107.83816 * 0.02562 * 6 5 4 9 9 N 1.39707 * 126.28513 * 179.97438 * 8 6 5 10 10 C 1.46897 * 110.99951 * 241.44759 * 9 8 6 11 11 C 1.46895 * 110.99916 * 117.49170 * 9 8 6 12 12 H 1.09008 * 109.47163 * 60.00042 * 11 9 8 13 13 C 1.52998 * 109.47319 * 299.99960 * 11 9 8 14 14 C 1.50699 * 109.47368 * 179.97438 * 11 9 8 15 15 H 1.07997 * 119.99778 * 359.97438 * 14 11 9 16 16 C 1.37875 * 120.00193 * 180.02562 * 14 11 9 17 17 N 1.31512 * 120.00349 * 359.97438 * 16 14 11 18 18 Si 1.86799 * 119.99965 * 180.02562 * 16 14 11 19 19 H 1.48497 * 109.47324 * 59.99694 * 18 16 14 20 20 H 1.48503 * 109.47041 * 179.97438 * 18 16 14 21 21 H 1.48500 * 109.47210 * 299.99535 * 18 16 14 22 22 C 1.36403 * 107.42829 * 0.25745 * 8 6 5 23 23 N 1.41387 * 126.09438 * 179.71847 * 22 8 6 24 24 H 1.09007 * 109.47095 * 299.99957 * 1 2 3 25 25 H 1.08994 * 109.47284 * 59.99582 * 1 2 3 26 26 H 1.09001 * 109.47133 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.46894 * 240.00348 * 2 1 3 28 28 H 1.09000 * 109.47272 * 299.99909 * 3 2 1 29 29 H 1.08995 * 109.47014 * 60.00421 * 3 2 1 30 30 H 1.09001 * 109.46802 * 180.02562 * 3 2 1 31 31 H 1.09004 * 109.47665 * 274.93414 * 7 6 5 32 32 H 1.09000 * 109.46981 * 34.93496 * 7 6 5 33 33 H 1.09001 * 109.47275 * 154.93133 * 7 6 5 34 34 H 1.09001 * 109.47033 * 290.19294 * 10 9 8 35 35 H 1.08996 * 109.47328 * 50.18887 * 10 9 8 36 36 H 1.08997 * 109.47331 * 170.19624 * 10 9 8 37 37 H 1.09005 * 109.47507 * 179.97438 * 13 11 9 38 38 H 1.08998 * 109.47383 * 299.99753 * 13 11 9 39 39 H 1.09001 * 109.47233 * 60.00136 * 13 11 9 40 40 H 0.97000 * 120.00409 * 179.97438 * 17 16 14 41 41 H 0.96994 * 120.00203 * 0.02562 * 23 22 8 42 42 H 0.97012 * 119.99902 * 179.97438 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0323 -0.7104 1.2304 5 7 1.7871 -0.3627 2.4691 6 7 2.4286 -1.2712 3.3204 7 6 2.4093 -1.2426 4.7850 8 6 3.0740 -2.1847 2.5452 9 7 3.8365 -3.2635 2.9997 10 6 5.2306 -3.1489 2.5510 11 6 3.2491 -4.5403 2.5726 12 1 3.2083 -4.5753 1.4838 13 6 1.8340 -4.6660 3.1403 14 6 4.0973 -5.6781 3.0797 15 1 4.9842 -5.4731 3.6608 16 6 3.7415 -6.9807 2.8009 17 7 2.6618 -7.2303 2.0928 18 14 4.7925 -8.3910 3.4301 19 1 4.8477 -8.3438 4.9133 20 1 4.1987 -9.6818 2.9981 21 1 6.1662 -8.2686 2.8795 22 6 2.8450 -1.8498 1.2429 23 7 3.3379 -2.5339 0.1079 24 1 -0.3634 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 1.8933 -0.5138 -0.8900 28 1 1.6767 1.9564 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 3.1300 1.4425 -0.0005 31 1 3.1902 -0.5730 5.1457 32 1 1.4381 -0.8865 5.1286 33 1 2.5852 -2.2469 5.1704 34 1 5.2797 -3.3078 1.4737 35 1 5.6084 -2.1547 2.7891 36 1 5.8380 -3.8993 3.0570 37 1 1.3979 -5.6133 2.8230 38 1 1.8748 -4.6311 4.2290 39 1 1.2207 -3.8431 2.7731 40 1 2.4117 -8.1467 1.8963 41 1 3.8947 -3.3203 0.2195 42 1 3.1186 -2.2172 -0.7825 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000091549237.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:43:33 Heat of formation + Delta-G solvation = 82.841244 kcal Electronic energy + Delta-G solvation = -21626.184735 eV Core-core repulsion = 18643.084734 eV Total energy + Delta-G solvation = -2983.100001 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 266.180 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.78562 -36.87685 -35.39909 -33.44774 -32.62507 -31.07424 -29.26946 -27.82277 -26.98543 -25.57361 -25.16102 -24.00943 -22.15679 -20.95176 -19.11604 -18.54865 -16.74546 -16.20404 -15.47340 -15.23832 -14.69388 -14.49320 -14.29260 -13.91162 -13.57024 -13.30960 -13.20152 -12.87188 -12.34081 -12.16666 -12.11697 -11.97165 -11.69211 -11.28368 -11.09573 -10.99529 -10.88119 -10.80388 -10.75931 -10.27458 -10.20470 -10.11571 -10.05251 -9.90284 -9.02104 -8.50060 -8.37344 -7.46288 -6.45318 -6.06703 -4.12955 2.45006 3.00579 3.28058 3.33257 3.35442 3.46898 4.35117 4.60160 4.79636 5.01703 5.16380 5.25427 5.35770 5.37991 5.62528 5.66854 5.75347 5.82075 5.98533 5.99433 6.00768 6.05351 6.16466 6.19437 6.34015 6.40714 6.55557 6.64798 6.83254 6.95025 7.02204 7.09318 7.38744 7.46993 7.74114 7.83994 8.04012 8.18346 8.26802 8.31219 8.55406 8.71734 8.92291 9.52298 10.99359 Molecular weight = 266.18amu Principal moments of inertia in cm(-1) A = 0.027739 B = 0.005613 C = 0.005354 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1009.162151 B = 4987.241211 C = 5228.877702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.005 4.005 3 C -0.139 4.139 4 C 0.040 3.960 5 N -0.287 5.287 6 N -0.359 5.359 7 C 0.118 3.882 8 C 0.212 3.788 9 N -0.489 5.489 10 C 0.054 3.946 11 C 0.225 3.775 12 H 0.013 0.987 13 C -0.128 4.128 14 C -0.511 4.511 15 H 0.064 0.936 16 C 0.062 3.938 17 N -0.890 5.890 18 Si 0.898 3.102 19 H -0.277 1.277 20 H -0.288 1.288 21 H -0.277 1.277 22 C 0.031 3.969 23 N -0.876 5.876 24 H 0.059 0.941 25 H 0.054 0.946 26 H 0.055 0.945 27 H 0.077 0.923 28 H 0.054 0.946 29 H 0.059 0.941 30 H 0.052 0.948 31 H 0.061 0.939 32 H 0.074 0.926 33 H 0.094 0.906 34 H 0.024 0.976 35 H 0.042 0.958 36 H 0.079 0.921 37 H 0.086 0.914 38 H 0.029 0.971 39 H 0.006 0.994 40 H 0.262 0.738 41 H 0.397 0.603 42 H 0.386 0.614 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.494 11.971 -2.502 12.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.026 4.026 3 C -0.197 4.197 4 C -0.127 4.127 5 N -0.112 5.112 6 N -0.146 5.146 7 C -0.024 4.024 8 C -0.011 4.011 9 N -0.213 5.213 10 C -0.094 4.094 11 C 0.120 3.880 12 H 0.031 0.969 13 C -0.187 4.187 14 C -0.549 4.549 15 H 0.082 0.918 16 C -0.140 4.140 17 N -0.528 5.528 18 Si 0.726 3.274 19 H -0.202 1.202 20 H -0.214 1.214 21 H -0.203 1.203 22 C -0.080 4.080 23 N -0.427 5.427 24 H 0.078 0.922 25 H 0.073 0.927 26 H 0.074 0.926 27 H 0.095 0.905 28 H 0.073 0.927 29 H 0.078 0.922 30 H 0.071 0.929 31 H 0.080 0.920 32 H 0.092 0.908 33 H 0.113 0.887 34 H 0.042 0.958 35 H 0.061 0.939 36 H 0.098 0.902 37 H 0.105 0.895 38 H 0.048 0.952 39 H 0.025 0.975 40 H 0.072 0.928 41 H 0.228 0.772 42 H 0.213 0.787 Dipole moment (debyes) X Y Z Total from point charges -1.213 12.664 -1.050 12.765 hybrid contribution 1.012 -1.715 -1.141 2.295 sum -0.201 10.949 -2.191 11.168 Atomic orbital electron populations 1.21789 0.94359 1.02024 1.01631 1.19385 0.95643 0.95044 0.92513 1.21785 1.00939 0.95246 1.01684 1.21526 1.01029 0.96574 0.93595 1.77054 1.20174 1.14539 0.99465 1.47939 1.39922 1.21104 1.05648 1.21617 1.02066 1.04064 0.74668 1.18599 1.01547 0.93910 0.87093 1.58938 1.01072 1.00765 1.60495 1.22127 0.88851 1.00228 0.98196 1.19333 0.92171 0.82273 0.94223 0.96928 1.21756 0.97287 1.00884 0.98732 1.21091 1.09889 0.89875 1.34055 0.91821 1.24909 0.95241 0.98740 0.95094 1.69890 1.24153 1.20088 1.38683 0.86565 0.80351 0.81207 0.79294 1.20233 1.21356 1.20282 1.17750 1.04731 0.97472 0.88021 1.41844 1.62440 1.34818 1.03579 0.92161 0.92720 0.92629 0.90507 0.92718 0.92161 0.92885 0.92003 0.90774 0.88708 0.95799 0.93929 0.90223 0.89520 0.95160 0.97489 0.92824 0.77201 0.78684 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.79 9.18 37.16 0.34 -1.45 16 2 C -0.01 -0.07 3.34 -91.77 -0.31 -0.38 16 3 C -0.14 -1.66 9.18 37.16 0.34 -1.32 16 4 C 0.04 0.70 5.72 -82.32 -0.47 0.23 16 5 N -0.29 -5.35 12.56 33.71 0.42 -4.93 16 6 N -0.36 -6.83 4.05 -66.82 -0.27 -7.10 16 7 C 0.12 1.81 11.44 59.84 0.68 2.50 16 8 C 0.21 4.33 4.23 -152.08 -0.64 3.69 16 9 N -0.49 -10.49 4.54 -174.32 -0.79 -11.28 16 10 C 0.05 1.05 8.81 60.06 0.53 1.58 16 11 C 0.22 5.52 1.85 -68.87 -0.13 5.39 16 12 H 0.01 0.35 6.03 -51.92 -0.31 0.03 16 13 C -0.13 -3.22 8.85 37.16 0.33 -2.89 16 14 C -0.51 -13.37 7.99 -34.44 -0.28 -13.65 16 15 H 0.06 1.65 6.41 -52.49 -0.34 1.31 16 16 C 0.06 1.65 5.30 -17.82 -0.09 1.56 16 17 N -0.89 -24.70 11.32 55.43 0.63 -24.08 16 18 Si 0.90 20.67 29.54 -169.99 -5.02 15.65 16 19 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 20 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 21 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 22 C 0.03 0.59 6.76 -83.46 -0.56 0.03 16 23 N -0.88 -15.19 8.64 32.49 0.28 -14.91 16 24 H 0.06 0.80 8.14 -51.92 -0.42 0.38 16 25 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 26 H 0.05 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.08 0.97 7.03 -51.93 -0.37 0.60 16 28 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 29 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 30 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 31 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 32 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 33 H 0.09 1.53 8.02 -51.93 -0.42 1.11 16 34 H 0.02 0.45 6.08 -51.93 -0.32 0.14 16 35 H 0.04 0.75 8.06 -51.93 -0.42 0.34 16 36 H 0.08 1.56 6.46 -51.93 -0.34 1.23 16 37 H 0.09 2.36 6.07 -51.93 -0.32 2.05 16 38 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 39 H 0.01 0.15 7.22 -51.93 -0.37 -0.22 16 40 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 41 H 0.40 7.39 5.41 -40.82 -0.22 7.17 16 42 H 0.39 5.59 7.86 -40.81 -0.32 5.26 16 LS Contribution 330.85 15.07 4.99 4.99 Total: -1.00 -29.24 330.85 -6.69 -35.93 By element: Atomic # 1 Polarization: 17.10 SS G_CDS: -6.67 Total: 10.43 kcal Atomic # 6 Polarization: -4.45 SS G_CDS: -0.26 Total: -4.70 kcal Atomic # 7 Polarization: -62.57 SS G_CDS: 0.27 Total: -62.30 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -29.24 -6.69 -35.93 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000091549237.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.775 kcal (2) G-P(sol) polarization free energy of solvation -29.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.536 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.934 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds