Wall clock time and date at job start Mon Mar 30 2020 04:34:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.40216 * 120.50335 * 2 1 4 4 C 1.38513 * 120.72485 * 15.41512 * 3 2 1 5 5 C 1.38384 * 119.80254 * 180.02562 * 4 3 2 6 6 Cl 1.73606 * 119.90936 * 180.02562 * 5 4 3 7 7 C 1.38384 * 120.17314 * 0.03218 * 5 4 3 8 8 C 1.38312 * 120.24517 * 359.97241 * 7 5 4 9 9 C 1.38385 * 119.88864 * 0.02562 * 8 7 5 10 10 O 1.36016 * 120.64511 * 180.02562 * 9 8 7 11 11 C 1.42991 * 116.71381 * 147.18906 * 10 9 8 12 12 H 1.09000 * 109.44259 * 166.39932 * 11 10 9 13 13 C 1.50701 * 109.45030 * 286.33039 * 11 10 9 14 14 H 1.08002 * 119.99761 * 119.99567 * 13 11 10 15 15 C 1.37871 * 119.99694 * 300.28130 * 13 11 10 16 16 N 1.31514 * 120.00482 * 359.71466 * 15 13 11 17 17 Si 1.86801 * 119.99746 * 179.72062 * 15 13 11 18 18 H 1.48504 * 109.47266 * 60.00049 * 17 15 13 19 19 H 1.48504 * 109.46970 * 179.97438 * 17 15 13 20 20 H 1.48499 * 109.47383 * 299.99456 * 17 15 13 21 21 C 1.35084 * 120.50959 * 180.02562 * 2 1 3 22 22 O 1.21296 * 120.13021 * 1.69171 * 21 2 1 23 23 H 1.09005 * 109.47162 * 89.99710 * 1 2 3 24 24 H 1.09001 * 109.47048 * 209.99549 * 1 2 3 25 25 H 1.09001 * 109.47762 * 330.00047 * 1 2 3 26 26 H 1.07999 * 120.09650 * 0.04975 * 4 3 2 27 27 H 1.08000 * 119.87656 * 179.97438 * 7 5 4 28 28 H 1.07998 * 120.04977 * 180.02562 * 8 7 5 29 29 H 0.96995 * 120.00207 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1767 1.2081 0.0000 4 6 1.5469 2.4005 0.3165 5 6 2.2676 3.5818 0.3101 6 17 1.4812 5.0778 0.7070 7 6 3.6134 3.5738 -0.0120 8 6 4.2468 2.3858 -0.3289 9 6 3.5322 1.2007 -0.3244 10 8 4.1398 0.0236 -0.6330 11 6 3.6571 -1.1439 0.0367 12 1 4.0441 -2.0334 -0.4603 13 6 4.1217 -1.1282 1.4702 14 1 3.3984 -1.1293 2.2723 15 6 5.4699 -1.1066 1.7577 16 7 6.3506 -1.1053 0.7810 17 14 6.0457 -1.0793 3.5345 18 1 5.5491 -2.2912 4.2345 19 1 7.5301 -1.0591 3.5736 20 1 5.5159 0.1335 4.2080 21 6 2.1507 -1.1638 -0.0005 22 8 1.5564 -2.2207 -0.0320 23 1 -0.3634 0.0001 -1.0277 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3635 0.8900 0.5138 26 1 0.4966 2.4081 0.5679 27 1 4.1712 4.4986 -0.0160 28 1 5.2973 2.3831 -0.5794 29 1 7.2991 -1.0897 0.9832 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084788024.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:34:22 Heat of formation + Delta-G solvation = -45.426419 kcal Electronic energy + Delta-G solvation = -18283.204053 eV Core-core repulsion = 15197.740417 eV Total energy + Delta-G solvation = -3085.463636 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.045 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.70400 -38.24151 -36.92047 -36.02381 -34.91358 -32.91083 -30.06760 -29.28101 -28.75120 -26.39485 -23.57593 -22.89218 -21.86298 -18.93660 -18.28733 -17.23417 -16.67303 -15.38230 -15.21693 -15.10835 -14.66599 -14.41924 -13.93771 -13.84162 -13.31880 -13.04594 -12.72366 -12.22156 -12.14552 -11.95378 -11.64604 -11.26695 -11.07626 -11.02653 -10.83545 -10.55437 -10.45077 -9.80212 -9.51949 -8.92357 -8.85698 -8.12560 -7.14185 -6.37993 -4.60278 1.55067 1.62588 2.38002 3.04407 3.16932 3.20648 3.26798 3.27265 4.01797 4.18021 4.52532 4.81429 5.06779 5.16872 5.30833 5.49877 5.54155 5.66282 5.80190 5.92180 6.07393 6.22723 6.46380 6.58183 6.76271 6.90703 7.04932 7.45250 7.53144 7.62715 8.28705 8.51443 8.59355 9.15278 10.65419 Molecular weight = 267.04amu Principal moments of inertia in cm(-1) A = 0.017532 B = 0.008257 C = 0.006581 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1596.684815 B = 3390.211670 C = 4253.887106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.559 5.559 3 C 0.104 3.896 4 C -0.126 4.126 5 C -0.052 4.052 6 Cl -0.087 7.087 7 C -0.104 4.104 8 C -0.115 4.115 9 C 0.145 3.855 10 O -0.295 6.295 11 C 0.206 3.794 12 H 0.117 0.883 13 C -0.562 4.562 14 H 0.066 0.934 15 C 0.090 3.910 16 N -0.847 5.847 17 Si 0.904 3.096 18 H -0.271 1.271 19 H -0.280 1.280 20 H -0.271 1.271 21 C 0.504 3.496 22 O -0.532 6.532 23 H 0.059 0.941 24 H 0.080 0.920 25 H 0.073 0.927 26 H 0.132 0.868 27 H 0.132 0.868 28 H 0.142 0.858 29 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.110 9.133 -1.460 11.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.285 5.285 3 C 0.009 3.991 4 C -0.147 4.147 5 C -0.079 4.079 6 Cl -0.058 7.058 7 C -0.124 4.124 8 C -0.134 4.134 9 C 0.095 3.905 10 O -0.208 6.208 11 C 0.150 3.850 12 H 0.134 0.866 13 C -0.599 4.599 14 H 0.084 0.916 15 C -0.120 4.120 16 N -0.481 5.481 17 Si 0.729 3.271 18 H -0.196 1.196 19 H -0.206 1.206 20 H -0.196 1.196 21 C 0.295 3.705 22 O -0.408 6.408 23 H 0.077 0.923 24 H 0.099 0.901 25 H 0.091 0.909 26 H 0.150 0.850 27 H 0.150 0.850 28 H 0.159 0.841 29 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -6.199 8.505 -1.649 10.653 hybrid contribution -0.036 0.146 1.211 1.220 sum -6.234 8.651 -0.438 10.672 Atomic orbital electron populations 1.21735 0.79131 1.03371 1.02126 1.45666 1.06655 1.04877 1.71307 1.17943 0.91367 0.85949 1.03830 1.20262 1.00335 0.89581 1.04546 1.20263 0.93266 0.86141 1.08275 1.98320 1.81015 1.33539 1.92967 1.20712 0.92310 0.98317 1.01018 1.20458 1.00223 0.89603 1.03136 1.18776 0.88079 0.89027 0.94574 1.86520 1.59310 1.12831 1.62122 1.20639 0.82470 0.85565 0.96334 0.86599 1.21080 0.92814 1.56348 0.89648 0.91585 1.24992 0.96169 0.92509 0.98343 1.69997 1.02149 1.44026 1.31881 0.86457 0.77767 0.79294 0.83541 1.19590 1.20563 1.19599 1.22645 0.92784 0.82160 0.72884 1.90607 1.71471 1.29950 1.48784 0.92288 0.90125 0.90891 0.84993 0.85029 0.84051 0.91897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.20 10.23 59.84 0.61 1.81 15 2 N -0.56 -11.17 3.12 -120.61 -0.38 -11.54 15 3 C 0.10 2.03 6.39 -83.49 -0.53 1.50 15 4 C -0.13 -2.05 9.14 -39.43 -0.36 -2.41 15 5 C -0.05 -0.81 6.32 -39.47 -0.25 -1.06 15 6 Cl -0.09 -1.15 28.95 -51.86 -1.50 -2.65 15 7 C -0.10 -1.61 9.82 -39.50 -0.39 -1.99 15 8 C -0.11 -2.08 10.00 -39.50 -0.39 -2.47 15 9 C 0.14 3.06 6.07 -39.10 -0.24 2.82 15 10 O -0.29 -7.13 9.57 -19.79 -0.19 -7.32 15 11 C 0.21 5.17 3.05 -29.04 -0.09 5.08 15 12 H 0.12 3.03 8.14 -51.93 -0.42 2.61 15 13 C -0.56 -14.91 8.38 -34.44 -0.29 -15.20 15 14 H 0.07 1.78 7.74 -52.49 -0.41 1.38 15 15 C 0.09 2.33 5.40 -17.82 -0.10 2.24 15 16 N -0.85 -22.60 12.83 55.43 0.71 -21.89 15 17 Si 0.90 20.16 29.54 -169.99 -5.02 15.14 15 18 H -0.27 -6.02 7.11 56.52 0.40 -5.62 15 19 H -0.28 -6.09 7.11 56.52 0.40 -5.69 15 20 H -0.27 -6.04 7.11 56.52 0.40 -5.64 15 21 C 0.50 11.78 6.85 -10.85 -0.07 11.70 15 22 O -0.53 -13.21 16.77 5.54 0.09 -13.11 15 23 H 0.06 0.81 8.14 -51.93 -0.42 0.39 15 24 H 0.08 1.26 7.49 -51.93 -0.39 0.87 15 25 H 0.07 0.91 5.96 -51.93 -0.31 0.60 15 26 H 0.13 1.84 6.12 -52.49 -0.32 1.52 15 27 H 0.13 1.67 8.06 -52.49 -0.42 1.25 15 28 H 0.14 2.44 8.06 -52.49 -0.42 2.02 15 29 H 0.27 6.81 8.31 -40.82 -0.34 6.47 15 LS Contribution 271.74 15.07 4.10 4.10 Total: -1.00 -28.57 271.74 -6.54 -35.11 By element: Atomic # 1 Polarization: 2.41 SS G_CDS: -2.25 Total: 0.16 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: -2.10 Total: 2.01 kcal Atomic # 7 Polarization: -33.77 SS G_CDS: 0.34 Total: -33.43 kcal Atomic # 8 Polarization: -20.34 SS G_CDS: -0.10 Total: -20.44 kcal Atomic # 14 Polarization: 20.16 SS G_CDS: -5.02 Total: 15.14 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.50 Total: -2.65 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -28.57 -6.54 -35.11 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084788024.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.314 kcal (2) G-P(sol) polarization free energy of solvation -28.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.538 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.112 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds