Wall clock time and date at job start Mon Mar 30 2020 04:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.08998 * 109.44618 * 2 1 4 4 O 1.43006 * 109.44608 * 119.90577 * 2 1 3 5 5 C 1.35938 * 116.69797 * 166.39813 * 4 2 1 6 6 C 1.38393 * 120.67623 * 147.17948 * 5 4 2 7 7 C 1.38405 * 119.87019 * 180.12588 * 6 5 4 8 8 Cl 1.73605 * 119.87318 * 179.97438 * 7 6 5 9 9 C 1.38455 * 120.25879 * 0.25112 * 7 6 5 10 10 C 1.38204 * 120.20217 * 359.45925 * 9 7 6 11 11 C 1.38649 * 119.81865 * 0.53078 * 10 9 7 12 12 N 1.39966 * 120.72532 * 179.78514 * 11 10 9 13 13 C 1.37082 * 120.49807 * 15.45941 * 12 11 10 14 14 H 1.08008 * 120.00526 * 221.92100 * 13 12 11 15 15 C 1.38878 * 120.00212 * 41.92226 * 13 12 11 16 16 N 1.31436 * 119.99454 * 15.54407 * 15 13 12 17 17 Si 1.86801 * 120.00301 * 195.54177 * 15 13 12 18 18 H 1.48504 * 109.46846 * 0.02562 * 17 15 13 19 19 H 1.48502 * 109.46820 * 119.99943 * 17 15 13 20 20 H 1.48495 * 109.47119 * 240.00068 * 17 15 13 21 21 C 1.35089 * 119.00405 * 195.48141 * 12 11 10 22 22 O 1.21277 * 120.12692 * 181.65356 * 21 12 11 23 23 H 1.09007 * 109.46958 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.47133 * 299.93147 * 1 2 3 25 25 H 1.08995 * 109.47215 * 59.93943 * 1 2 3 26 26 H 1.08010 * 120.06570 * 0.15497 * 6 5 4 27 27 H 1.08001 * 119.89987 * 179.72289 * 9 7 6 28 28 H 1.07999 * 120.09373 * 180.25803 * 10 9 7 29 29 H 0.96998 * 119.99696 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8928 1.0278 0.0000 4 8 2.0060 -0.6723 1.1689 5 6 3.3224 -1.0111 1.1851 6 6 4.0349 -1.0193 2.3715 7 6 5.3752 -1.3645 2.3684 8 17 6.2691 -1.3742 3.8566 9 6 6.0073 -1.6965 1.1821 10 6 5.3010 -1.6963 -0.0058 11 6 3.9580 -1.3516 -0.0093 12 7 3.2257 -1.3408 -1.2021 13 6 3.7128 -1.9611 -2.3232 14 1 3.6208 -1.4838 -3.2877 15 6 4.3248 -3.2034 -2.2190 16 7 4.1736 -3.9209 -1.1282 17 14 5.3625 -3.8547 -3.6291 18 1 5.3748 -2.8626 -4.7340 19 1 6.7512 -4.0854 -3.1562 20 1 4.7871 -5.1335 -4.1177 21 6 2.0318 -0.7094 -1.2319 22 8 1.3665 -0.7129 -2.2459 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5128 0.8906 25 1 -0.3633 0.5147 -0.8894 26 1 3.5457 -0.7574 3.2983 27 1 7.0546 -1.9605 1.1857 28 1 5.7949 -1.9596 -0.9295 29 1 4.6007 -4.7888 -1.0555 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084883291.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:33:52 Heat of formation + Delta-G solvation = -43.650836 kcal Electronic energy + Delta-G solvation = -18397.965402 eV Core-core repulsion = 15312.578761 eV Total energy + Delta-G solvation = -3085.386641 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.045 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -40.70671 -37.95472 -37.11705 -36.08277 -34.75638 -32.12093 -31.51282 -29.47235 -28.33450 -26.09050 -23.28967 -22.53927 -21.88492 -18.97423 -18.44673 -17.70292 -16.47411 -15.90870 -15.20830 -14.97725 -14.29581 -13.99740 -13.96273 -13.44050 -13.26009 -12.88917 -12.53035 -12.19846 -12.03149 -11.82485 -11.50170 -11.44450 -11.18666 -10.89033 -10.73122 -10.54096 -10.36975 -10.33259 -9.50372 -9.04064 -8.71910 -7.95520 -7.03686 -6.50224 -4.41104 1.72260 1.96096 2.60269 2.98304 3.10588 3.16024 3.30797 3.67247 3.98733 4.32356 4.37160 4.80762 4.98557 5.31566 5.36610 5.46034 5.61737 5.77448 6.01214 6.05591 6.15495 6.37745 6.42314 6.62798 6.87092 6.98959 7.19956 7.27609 7.61758 7.96245 8.08474 8.69697 8.90787 9.39735 10.41321 Molecular weight = 267.04amu Principal moments of inertia in cm(-1) A = 0.014899 B = 0.010122 C = 0.006319 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1878.875387 B = 2765.630807 C = 4429.832735 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C 0.076 3.924 3 H 0.085 0.915 4 O -0.307 6.307 5 C 0.063 3.937 6 C -0.112 4.112 7 C -0.057 4.057 8 Cl -0.093 7.093 9 C -0.109 4.109 10 C -0.076 4.076 11 C 0.154 3.846 12 N -0.380 5.380 13 C -0.342 4.342 14 H 0.101 0.899 15 C 0.046 3.954 16 N -0.840 5.840 17 Si 0.922 3.078 18 H -0.263 1.263 19 H -0.274 1.274 20 H -0.276 1.276 21 C 0.447 3.553 22 O -0.530 6.530 23 H 0.067 0.933 24 H 0.068 0.932 25 H 0.085 0.915 26 H 0.132 0.868 27 H 0.124 0.876 28 H 0.138 0.862 29 H 0.276 0.724 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.106 5.018 5.891 8.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.017 3.983 3 H 0.102 0.898 4 O -0.223 6.223 5 C 0.016 3.984 6 C -0.132 4.132 7 C -0.085 4.085 8 Cl -0.065 7.065 9 C -0.128 4.128 10 C -0.098 4.098 11 C 0.055 3.945 12 N -0.088 5.088 13 C -0.468 4.468 14 H 0.119 0.881 15 C -0.163 4.163 16 N -0.472 5.472 17 Si 0.747 3.253 18 H -0.187 1.187 19 H -0.199 1.199 20 H -0.202 1.202 21 C 0.236 3.764 22 O -0.409 6.409 23 H 0.086 0.914 24 H 0.087 0.913 25 H 0.104 0.896 26 H 0.150 0.850 27 H 0.142 0.858 28 H 0.156 0.844 29 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 1.660 4.776 5.592 7.538 hybrid contribution 0.686 -0.673 -0.566 1.115 sum 2.346 4.103 5.026 6.899 Atomic orbital electron populations 1.21595 0.90178 1.03874 1.02807 1.22563 0.97245 0.95742 0.82787 0.89787 1.86083 1.21793 1.74596 1.39782 1.18280 0.83450 1.04101 0.92523 1.19870 0.91618 1.04991 0.96720 1.20155 0.91981 1.09955 0.86405 1.98299 1.75503 1.97601 1.35069 1.20700 0.99866 1.01754 0.90526 1.20501 0.91807 0.99505 0.97940 1.18326 0.92264 0.97929 0.86022 1.41344 1.14039 1.44462 1.08999 1.19489 1.39318 1.01013 0.87018 0.88094 1.25546 0.97803 0.94948 0.97985 1.70026 1.38493 1.11255 1.27463 0.85932 0.79287 0.79209 0.80885 1.18739 1.19891 1.20190 1.21331 0.81388 0.83529 0.90107 1.90566 1.55262 1.61482 1.33563 0.91369 0.91278 0.89605 0.85022 0.85789 0.84429 0.91357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.03 9.14 37.16 0.34 -1.69 15 2 C 0.08 1.47 3.68 -27.86 -0.10 1.37 15 3 H 0.08 1.41 8.14 -51.93 -0.42 0.99 15 4 O -0.31 -6.28 10.09 -19.55 -0.20 -6.48 15 5 C 0.06 1.34 6.44 -39.05 -0.25 1.09 15 6 C -0.11 -2.08 9.78 -39.46 -0.39 -2.46 15 7 C -0.06 -1.02 6.32 -39.44 -0.25 -1.27 15 8 Cl -0.09 -1.41 28.95 -51.86 -1.50 -2.91 15 9 C -0.11 -2.02 9.82 -39.51 -0.39 -2.41 15 10 C -0.08 -1.63 7.70 -39.44 -0.30 -1.93 15 11 C 0.15 3.58 5.47 -83.51 -0.46 3.12 15 12 N -0.38 -9.65 2.75 -58.78 -0.16 -9.82 15 13 C -0.34 -9.02 8.32 -14.97 -0.12 -9.15 15 14 H 0.10 2.71 7.85 -52.48 -0.41 2.30 15 15 C 0.05 1.16 3.51 -17.48 -0.06 1.10 15 16 N -0.84 -21.92 11.45 55.49 0.64 -21.29 15 17 Si 0.92 19.22 29.58 -169.99 -5.03 14.19 15 18 H -0.26 -5.43 7.11 56.52 0.40 -5.03 15 19 H -0.27 -5.48 7.11 56.52 0.40 -5.08 15 20 H -0.28 -5.83 7.11 56.52 0.40 -5.43 15 21 C 0.45 10.80 7.33 -10.82 -0.08 10.72 15 22 O -0.53 -13.90 16.15 5.56 0.09 -13.81 15 23 H 0.07 1.16 8.14 -51.93 -0.42 0.74 15 24 H 0.07 0.89 8.14 -51.93 -0.42 0.47 15 25 H 0.09 1.30 7.86 -51.93 -0.41 0.89 15 26 H 0.13 2.14 8.06 -52.48 -0.42 1.72 15 27 H 0.12 2.00 8.06 -52.49 -0.42 1.57 15 28 H 0.14 3.06 6.11 -52.49 -0.32 2.74 15 29 H 0.28 6.76 8.31 -40.82 -0.34 6.42 15 LS Contribution 268.47 15.07 4.05 4.05 Total: -1.00 -28.71 268.47 -6.57 -35.27 By element: Atomic # 1 Polarization: 4.68 SS G_CDS: -2.39 Total: 2.29 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -2.06 Total: -1.50 kcal Atomic # 7 Polarization: -31.58 SS G_CDS: 0.47 Total: -31.10 kcal Atomic # 8 Polarization: -20.18 SS G_CDS: -0.11 Total: -20.29 kcal Atomic # 14 Polarization: 19.22 SS G_CDS: -5.03 Total: 14.19 kcal Atomic # 17 Polarization: -1.41 SS G_CDS: -1.50 Total: -2.91 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -28.71 -6.57 -35.27 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084883291.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.376 kcal (2) G-P(sol) polarization free energy of solvation -28.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.570 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds