Wall clock time and date at job start Mon Mar 30 2020 04:33:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.08998 * 109.44247 * 2 1 4 4 O 1.43003 * 109.44118 * 240.06965 * 2 1 3 5 5 C 1.35934 * 116.70510 * 286.31136 * 4 2 1 6 6 C 1.38391 * 120.67315 * 147.21532 * 5 4 2 7 7 C 1.38411 * 119.86561 * 180.02562 * 6 5 4 8 8 Cl 1.73597 * 119.86696 * 179.97438 * 7 6 5 9 9 C 1.38452 * 120.26062 * 0.02562 * 7 6 5 10 10 C 1.38207 * 120.20221 * 359.97438 * 9 7 6 11 11 C 1.38641 * 119.82264 * 359.97438 * 10 9 7 12 12 N 1.39966 * 120.72816 * 180.02562 * 11 10 9 13 13 C 1.37096 * 120.49276 * 15.40316 * 12 11 10 14 14 H 1.08002 * 119.99498 * 221.96268 * 13 12 11 15 15 C 1.38868 * 119.99863 * 41.96383 * 13 12 11 16 16 N 1.31431 * 120.00264 * 15.52785 * 15 13 12 17 17 Si 1.86802 * 119.99614 * 195.52806 * 15 13 12 18 18 H 1.48497 * 109.47321 * 90.00237 * 17 15 13 19 19 H 1.48505 * 109.47025 * 210.00069 * 17 15 13 20 20 H 1.48500 * 109.47497 * 329.99862 * 17 15 13 21 21 C 1.35079 * 119.00854 * 195.43308 * 12 11 10 22 22 O 1.21290 * 120.12299 * 181.67983 * 21 12 11 23 23 H 1.09004 * 109.47252 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.47137 * 299.92867 * 1 2 3 25 25 H 1.08997 * 109.47850 * 59.92980 * 1 2 3 26 26 H 1.07995 * 120.06485 * 0.09099 * 6 5 4 27 27 H 1.07997 * 119.89888 * 179.70167 * 9 7 6 28 28 H 1.07997 * 120.08268 * 179.97438 * 10 9 7 29 29 H 0.97003 * 119.99940 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8928 1.0278 0.0000 4 8 2.0060 -0.6728 -1.1686 5 6 1.8877 -2.0269 -1.1847 6 6 1.6596 -2.7016 -2.3713 7 6 1.5414 -4.0807 -2.3683 8 17 1.2546 -4.9270 -3.8567 9 6 1.6499 -4.7877 -1.1829 10 6 1.8776 -4.1208 0.0060 11 6 1.9981 -2.7396 0.0097 12 7 2.2294 -2.0450 1.2027 13 6 2.6505 -2.7107 2.3247 14 1 2.2288 -2.4653 3.2883 15 6 3.6194 -3.7003 2.2223 16 7 4.3483 -3.7961 1.1329 17 14 3.8864 -4.8953 3.6330 18 1 3.0110 -6.0808 3.4501 19 1 5.3070 -5.3275 3.6534 20 1 3.5537 -4.2277 4.9171 21 6 2.0308 -0.7093 1.2320 22 8 2.2542 -0.0828 2.2463 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5127 0.8906 25 1 -0.3635 0.5149 -0.8893 26 1 1.5751 -2.1533 -3.2979 27 1 1.5519 -5.8632 -1.1866 28 1 1.9615 -4.6741 0.9296 29 1 5.0253 -4.4872 1.0616 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084883292.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:33:54 Heat of formation + Delta-G solvation = -44.505095 kcal Electronic energy + Delta-G solvation = -18514.660425 eV Core-core repulsion = 15429.236741 eV Total energy + Delta-G solvation = -3085.423684 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.045 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -40.79282 -37.90919 -37.15780 -36.05201 -34.74339 -32.11346 -31.39681 -29.58201 -28.39419 -25.97079 -23.62100 -22.57210 -21.89066 -18.94433 -18.30954 -17.69409 -16.34656 -15.44696 -15.21764 -15.07014 -14.83298 -14.04845 -13.83373 -13.58259 -13.29042 -12.88302 -12.60931 -12.17623 -11.94112 -11.83587 -11.66342 -11.48967 -11.18152 -10.92464 -10.73658 -10.57110 -10.37548 -10.32123 -9.49639 -9.03875 -8.71926 -7.95358 -7.03764 -6.50248 -4.41642 1.72679 1.95986 2.60861 2.99104 3.10421 3.14649 3.32133 3.69085 4.00553 4.34143 4.35655 4.80621 4.94785 5.29285 5.33122 5.46103 5.62186 5.70199 5.91490 6.01171 6.13862 6.24281 6.41147 6.63550 6.87081 6.99082 7.19814 7.27440 7.61235 7.95829 8.08456 8.69317 8.90640 9.39284 10.41144 Molecular weight = 267.04amu Principal moments of inertia in cm(-1) A = 0.015949 B = 0.010013 C = 0.006571 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1755.198799 B = 2795.773062 C = 4260.347544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.077 3.923 3 H 0.136 0.864 4 O -0.305 6.305 5 C 0.064 3.936 6 C -0.112 4.112 7 C -0.057 4.057 8 Cl -0.093 7.093 9 C -0.109 4.109 10 C -0.077 4.077 11 C 0.155 3.845 12 N -0.377 5.377 13 C -0.343 4.343 14 H 0.101 0.899 15 C 0.047 3.953 16 N -0.840 5.840 17 Si 0.923 3.077 18 H -0.270 1.270 19 H -0.279 1.279 20 H -0.265 1.265 21 C 0.450 3.550 22 O -0.534 6.534 23 H 0.063 0.937 24 H 0.075 0.925 25 H 0.074 0.926 26 H 0.132 0.868 27 H 0.124 0.876 28 H 0.138 0.862 29 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.251 -1.028 -5.982 8.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.017 3.983 3 H 0.153 0.847 4 O -0.220 6.220 5 C 0.018 3.982 6 C -0.132 4.132 7 C -0.085 4.085 8 Cl -0.065 7.065 9 C -0.129 4.129 10 C -0.099 4.099 11 C 0.056 3.944 12 N -0.086 5.086 13 C -0.470 4.470 14 H 0.119 0.881 15 C -0.162 4.162 16 N -0.472 5.472 17 Si 0.748 3.252 18 H -0.196 1.196 19 H -0.204 1.204 20 H -0.189 1.189 21 C 0.239 3.761 22 O -0.414 6.414 23 H 0.082 0.918 24 H 0.094 0.906 25 H 0.093 0.907 26 H 0.149 0.851 27 H 0.142 0.858 28 H 0.156 0.844 29 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -5.869 -0.694 -5.685 8.201 hybrid contribution 0.419 -0.773 0.594 1.061 sum -5.451 -1.467 -5.091 7.601 Atomic orbital electron populations 1.22305 0.93936 1.03503 1.03321 1.22828 0.95554 0.97261 0.82632 0.84685 1.86140 1.79484 1.16322 1.40076 1.18263 1.05072 0.82446 0.92469 1.19883 1.04673 0.91927 0.96762 1.20161 1.10565 0.91390 0.86403 1.98299 1.95102 1.78034 1.35068 1.20696 1.02132 0.99499 0.90533 1.20510 0.99231 0.92192 0.97926 1.18308 0.97268 0.92836 0.86002 1.41310 1.53806 1.04510 1.08934 1.19462 1.21840 1.18600 0.87051 0.88118 1.25540 0.93658 0.99045 0.98006 1.70015 1.18097 1.31528 1.27573 0.85970 0.78050 0.80032 0.81137 1.19584 1.20425 1.18917 1.21267 0.81767 0.83016 0.90052 1.90587 1.51988 1.65057 1.33721 0.91756 0.90571 0.90730 0.85052 0.85815 0.84430 0.91284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.66 9.30 37.16 0.35 -2.31 15 2 C 0.08 1.46 3.81 -27.87 -0.11 1.35 15 3 H 0.14 2.24 8.14 -51.93 -0.42 1.82 15 4 O -0.31 -6.16 10.18 -19.53 -0.20 -6.35 15 5 C 0.06 1.34 5.85 -39.04 -0.23 1.11 15 6 C -0.11 -2.07 9.78 -39.46 -0.39 -2.45 15 7 C -0.06 -1.02 6.32 -39.44 -0.25 -1.26 15 8 Cl -0.09 -1.41 28.95 -51.86 -1.50 -2.91 15 9 C -0.11 -2.01 9.82 -39.51 -0.39 -2.40 15 10 C -0.08 -1.64 7.70 -39.44 -0.30 -1.95 15 11 C 0.16 3.57 5.47 -83.51 -0.46 3.11 15 12 N -0.38 -9.51 2.75 -58.79 -0.16 -9.67 15 13 C -0.34 -9.03 8.32 -14.96 -0.12 -9.15 15 14 H 0.10 2.69 7.85 -52.49 -0.41 2.28 15 15 C 0.05 1.17 3.50 -17.49 -0.06 1.11 15 16 N -0.84 -21.87 11.45 55.49 0.64 -21.23 15 17 Si 0.92 19.21 29.58 -169.99 -5.03 14.18 15 18 H -0.27 -5.37 7.11 56.52 0.40 -4.97 15 19 H -0.28 -5.81 7.11 56.52 0.40 -5.41 15 20 H -0.26 -5.54 7.11 56.52 0.40 -5.14 15 21 C 0.45 10.82 6.87 -10.84 -0.07 10.75 15 22 O -0.53 -14.21 17.09 5.55 0.09 -14.12 15 23 H 0.06 1.05 7.81 -51.93 -0.41 0.64 15 24 H 0.08 1.09 8.14 -51.93 -0.42 0.67 15 25 H 0.07 0.95 8.14 -51.93 -0.42 0.52 15 26 H 0.13 2.12 8.06 -52.49 -0.42 1.70 15 27 H 0.12 1.98 8.06 -52.49 -0.42 1.56 15 28 H 0.14 3.06 6.10 -52.49 -0.32 2.74 15 29 H 0.28 6.78 8.31 -40.82 -0.34 6.44 15 LS Contribution 268.67 15.07 4.05 4.05 Total: -1.00 -28.76 268.67 -6.53 -35.29 By element: Atomic # 1 Polarization: 5.24 SS G_CDS: -2.39 Total: 2.86 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: -2.03 Total: -2.09 kcal Atomic # 7 Polarization: -31.38 SS G_CDS: 0.47 Total: -30.90 kcal Atomic # 8 Polarization: -20.37 SS G_CDS: -0.10 Total: -20.47 kcal Atomic # 14 Polarization: 19.21 SS G_CDS: -5.03 Total: 14.18 kcal Atomic # 17 Polarization: -1.41 SS G_CDS: -1.50 Total: -2.91 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -28.76 -6.53 -35.29 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084883292.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.212 kcal (2) G-P(sol) polarization free energy of solvation -28.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.293 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds