Wall clock time and date at job start Mon Mar 30 2020 05:01:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.38459 * 120.00038 * 2 1 4 4 N 1.32506 * 119.15513 * 359.97438 * 3 2 1 5 5 C 1.32490 * 120.95052 * 180.02562 * 4 3 2 6 6 C 1.38270 * 119.27541 * 359.97438 * 5 4 3 7 7 Cl 1.73605 * 120.77092 * 179.97438 * 6 5 4 8 8 C 1.39763 * 118.45701 * 0.02562 * 6 5 4 9 9 N 1.38535 * 120.49835 * 179.97438 * 8 6 5 10 10 C 1.36929 * 120.00154 * 93.54931 * 9 8 6 11 11 H 1.07997 * 120.00408 * 341.49002 * 10 9 8 12 12 C 1.38845 * 120.00053 * 161.48446 * 10 9 8 13 13 N 1.31541 * 120.00294 * 331.63251 * 12 10 9 14 14 Si 1.86800 * 119.99957 * 151.90126 * 12 10 9 15 15 H 1.48505 * 109.46816 * 60.00524 * 14 12 10 16 16 H 1.48496 * 109.47229 * 180.02562 * 14 12 10 17 17 H 1.48498 * 109.47289 * 300.00652 * 14 12 10 18 18 C 1.46502 * 119.99772 * 273.54706 * 9 8 6 19 19 C 1.47196 * 109.47216 * 271.25049 * 18 9 8 20 20 N 5.62318 * 156.99364 * 268.55832 * 2 1 3 21 21 N 1.32389 * 119.16043 * 180.25216 * 3 2 1 22 22 H 1.09004 * 109.47429 * 180.02562 * 1 2 3 23 23 H 1.09003 * 109.47675 * 300.00420 * 1 2 3 24 24 H 1.08999 * 109.47502 * 60.00180 * 1 2 3 25 25 H 0.96998 * 120.00380 * 179.97438 * 2 1 3 26 26 H 1.08002 * 120.36255 * 179.97438 * 5 4 3 27 27 H 0.96993 * 120.00453 * 179.97438 * 13 12 10 28 28 H 1.08998 * 109.46948 * 31.25534 * 18 9 8 29 29 H 1.09005 * 109.46840 * 151.24958 * 18 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1572 1.1991 0.0000 4 7 1.4779 2.3367 -0.0005 5 6 2.1041 3.5043 -0.0010 6 6 3.4865 3.5302 -0.0005 7 17 4.3467 5.0381 -0.0018 8 6 4.1753 2.3140 0.0000 9 7 5.5605 2.2906 0.0000 10 6 6.2438 2.2061 1.1836 11 1 5.7499 2.4548 2.1113 12 6 7.5717 1.8005 1.1912 13 7 8.0190 0.9958 0.2517 14 14 8.7211 2.3916 2.5398 15 1 8.2037 1.9501 3.8599 16 1 10.0746 1.8207 2.3221 17 1 8.7989 3.8742 2.5093 18 6 6.2942 2.3561 -1.2663 19 6 6.4902 0.9948 -1.7908 20 7 6.6409 -0.0553 -2.1970 21 7 3.4810 1.1797 -0.0051 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3634 0.5138 -0.8900 25 1 1.9500 -0.8400 0.0004 26 1 1.5408 4.4259 -0.0019 27 1 8.9467 0.7127 0.2568 28 1 5.7249 2.9443 -1.9860 29 1 7.2642 2.8248 -1.1004 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000087800965.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:01:49 Heat of formation + Delta-G solvation = 114.139470 kcal Electronic energy + Delta-G solvation = -17833.940613 eV Core-core repulsion = 14819.981775 eV Total energy + Delta-G solvation = -3013.958838 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.058 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.39823 -37.01302 -35.96485 -35.18759 -34.34272 -32.84743 -31.40935 -29.64865 -27.21320 -26.15147 -24.76245 -23.01761 -21.33119 -18.12975 -17.84614 -17.14502 -16.14526 -15.67860 -15.23147 -14.95001 -14.52950 -14.12110 -13.88175 -13.55787 -13.14745 -12.49225 -12.13704 -11.91251 -11.64637 -11.43996 -11.12686 -10.94890 -10.86529 -10.60097 -10.50340 -10.27148 -10.16265 -10.06240 -9.44303 -9.10239 -8.52725 -7.66336 -7.56646 -6.19088 -3.61498 1.55766 1.62858 2.70741 3.23056 3.26914 3.34022 3.37441 3.89041 4.23249 4.35770 4.46515 4.57860 4.87208 5.02475 5.19862 5.30476 5.53193 5.55823 5.61566 5.82483 6.02305 6.21179 6.37611 6.67511 7.17890 7.33928 7.55885 7.81265 7.94124 8.66252 8.83212 9.17342 9.38017 9.71494 10.86620 Molecular weight = 267.06amu Principal moments of inertia in cm(-1) A = 0.017919 B = 0.007803 C = 0.006745 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1562.218708 B = 3587.348392 C = 4150.258935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.112 3.888 2 N -0.710 5.710 3 C 0.564 3.436 4 N -0.578 5.578 5 C 0.192 3.808 6 C -0.202 4.202 7 Cl -0.048 7.048 8 C 0.490 3.510 9 N -0.515 5.515 10 C -0.275 4.275 11 H 0.085 0.915 12 C 0.022 3.978 13 N -0.875 5.875 14 Si 0.915 3.085 15 H -0.280 1.280 16 H -0.289 1.289 17 H -0.275 1.275 18 C 0.268 3.732 19 C 0.244 3.756 20 N -0.485 5.485 21 N -0.565 5.565 22 H 0.069 0.931 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.414 0.586 26 H 0.166 0.834 27 H 0.266 0.734 28 H 0.069 0.931 29 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.730 6.135 -0.918 12.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.034 4.034 2 N -0.348 5.348 3 C 0.206 3.794 4 N -0.303 5.303 5 C 0.025 3.975 6 C -0.241 4.241 7 Cl -0.020 7.020 8 C 0.250 3.750 9 N -0.233 5.233 10 C -0.402 4.402 11 H 0.102 0.898 12 C -0.181 4.181 13 N -0.514 5.514 14 Si 0.742 3.258 15 H -0.205 1.205 16 H -0.214 1.214 17 H -0.200 1.200 18 C 0.140 3.860 19 C -0.075 4.075 20 N -0.166 5.166 21 N -0.291 5.291 22 H 0.088 0.912 23 H 0.074 0.926 24 H 0.073 0.927 25 H 0.250 0.750 26 H 0.183 0.817 27 H 0.077 0.923 28 H 0.087 0.913 29 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -10.909 3.767 -1.539 11.643 hybrid contribution 1.312 0.823 1.056 1.875 sum -9.597 4.590 -0.482 10.649 Atomic orbital electron populations 1.21396 0.78662 1.01371 1.01921 1.43875 1.06103 1.04261 1.80563 1.19429 0.85249 0.86373 0.88392 1.67909 1.40176 0.97340 1.24839 1.22644 0.89500 0.95562 0.89773 1.22935 0.94008 0.89603 1.17536 1.98316 1.77337 1.29083 1.97295 1.18416 0.87836 0.85271 0.83434 1.41741 0.96018 1.81461 1.04046 1.19121 0.92835 1.42762 0.85470 0.89765 1.25019 0.98832 0.95719 0.98483 1.69934 1.16502 1.29145 1.35807 0.86180 0.79409 0.79194 0.80996 1.20537 1.21437 1.20039 1.18142 0.98371 0.85182 0.84315 1.29781 0.91198 0.95992 0.90513 1.80767 1.10713 1.11888 1.13246 1.68524 1.05957 1.33161 1.21500 0.91196 0.92637 0.92656 0.74985 0.81661 0.92336 0.91332 0.87086 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.23 10.68 59.84 0.64 1.87 15 2 N -0.71 -10.73 5.86 -69.13 -0.41 -11.13 15 3 C 0.56 10.46 8.43 -322.85 -2.72 7.74 15 4 N -0.58 -9.80 9.58 -13.97 -0.13 -9.94 15 5 C 0.19 2.99 11.10 -17.26 -0.19 2.80 15 6 C -0.20 -3.59 6.39 -39.00 -0.25 -3.84 15 7 Cl -0.05 -0.77 28.57 -51.86 -1.48 -2.26 15 8 C 0.49 10.41 6.09 -154.72 -0.94 9.47 15 9 N -0.52 -11.74 2.08 -117.95 -0.24 -11.98 15 10 C -0.27 -6.82 9.56 -15.05 -0.14 -6.96 15 11 H 0.08 2.13 7.97 -52.49 -0.42 1.71 15 12 C 0.02 0.56 4.68 -17.45 -0.08 0.48 15 13 N -0.87 -23.27 9.72 55.49 0.54 -22.73 15 14 Si 0.91 20.00 29.64 -169.99 -5.04 14.96 15 15 H -0.28 -6.20 7.11 56.52 0.40 -5.79 15 16 H -0.29 -6.44 7.11 56.52 0.40 -6.04 15 17 H -0.27 -5.85 7.11 56.52 0.40 -5.45 15 18 C 0.27 5.71 5.45 -6.83 -0.04 5.68 15 19 C 0.24 5.93 13.12 -20.76 -0.27 5.66 15 20 N -0.49 -12.70 18.54 42.15 0.78 -11.91 15 21 N -0.57 -12.29 10.49 -13.11 -0.14 -12.43 15 22 H 0.07 0.56 8.14 -51.93 -0.42 0.14 15 23 H 0.05 0.62 8.14 -51.93 -0.42 0.20 15 24 H 0.05 0.61 8.14 -51.93 -0.42 0.19 15 25 H 0.41 6.01 8.94 -40.82 -0.37 5.64 15 26 H 0.17 1.95 8.06 -52.49 -0.42 1.52 15 27 H 0.27 7.00 8.31 -40.82 -0.34 6.66 15 28 H 0.07 1.23 8.05 -51.93 -0.42 0.81 15 29 H 0.11 2.36 7.02 -51.93 -0.36 2.00 15 LS Contribution 284.06 15.07 4.28 4.28 Total: -1.00 -30.40 284.06 -8.23 -38.63 By element: Atomic # 1 Polarization: 3.99 SS G_CDS: -2.39 Total: 1.60 kcal Atomic # 6 Polarization: 26.90 SS G_CDS: -4.00 Total: 22.90 kcal Atomic # 7 Polarization: -80.52 SS G_CDS: 0.40 Total: -80.12 kcal Atomic # 14 Polarization: 20.00 SS G_CDS: -5.04 Total: 14.96 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.48 Total: -2.26 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -30.40 -8.23 -38.63 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000087800965.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 152.774 kcal (2) G-P(sol) polarization free energy of solvation -30.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.635 kcal (6) G-S(sol) free energy of system = (1) + (5) 114.139 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds