Wall clock time and date at job start Mon Mar 30 2020 05:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46901 * 110.99975 * 2 1 4 4 C 1.50701 * 109.46921 * 66.04817 * 3 2 1 5 5 H 1.07998 * 120.00129 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99861 * 179.97438 * 4 3 2 7 7 N 1.31510 * 119.99913 * 0.02562 * 6 4 3 8 8 Si 1.86797 * 119.99734 * 180.02562 * 6 4 3 9 9 H 1.48502 * 109.47432 * 0.02562 * 8 6 4 10 10 H 1.48506 * 109.46890 * 120.00210 * 8 6 4 11 11 H 1.48501 * 109.47062 * 240.00257 * 8 6 4 12 12 C 1.37738 * 110.99864 * 236.04974 * 2 1 3 13 13 C 1.38053 * 120.62972 * 123.67689 * 12 2 1 14 14 C 1.39449 * 119.00268 * 179.69967 * 13 12 2 15 15 Cl 1.73603 * 119.80108 * 180.30725 * 14 13 12 16 16 N 1.31775 * 120.39797 * 0.60232 * 14 13 12 17 17 C 1.33789 * 121.20367 * 359.68611 * 16 14 13 18 18 N 1.32865 * 132.40022 * 180.02562 * 17 16 14 19 19 C 1.32752 * 109.73548 * 179.97438 * 18 17 16 20 20 N 1.31051 * 109.62475 * 0.02562 * 19 18 17 21 21 N 1.36565 * 120.62961 * 303.95346 * 12 2 1 22 22 H 1.09001 * 109.47121 * 59.99638 * 1 2 3 23 23 H 1.09005 * 109.47342 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.46894 * 299.99652 * 1 2 3 25 25 H 1.09002 * 109.47401 * 306.04845 * 3 2 1 26 26 H 1.09001 * 109.46874 * 186.04858 * 3 2 1 27 27 H 0.97002 * 119.99768 * 179.97438 * 7 6 4 28 28 H 1.07991 * 120.49667 * 359.97355 * 13 12 2 29 29 H 1.07995 * 125.18970 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 1.2985 5 1 1.0747 1.5112 2.0488 6 6 2.0277 3.3491 1.5290 7 7 2.7128 4.0015 0.6155 8 14 1.5839 4.1863 3.1388 9 1 0.8167 3.2436 3.9920 10 1 2.8260 4.5928 3.8441 11 1 0.7569 5.3878 2.8603 12 6 1.9626 -0.7181 -1.0667 13 6 2.8296 -0.1330 -1.9677 14 6 3.3136 -0.8934 -3.0317 15 17 4.4112 -0.1807 -4.1724 16 7 2.9383 -2.1478 -3.1799 17 6 2.0940 -2.7252 -2.3174 18 7 1.5773 -3.9475 -2.2517 19 6 0.7794 -4.0406 -1.1948 20 7 0.7583 -2.8960 -0.5570 21 7 1.5992 -2.0208 -1.2563 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.5611 1.9274 -0.8309 26 1 3.0797 1.3444 -0.1083 27 1 2.9874 4.9176 0.7775 28 1 3.1320 0.8967 -1.8477 29 1 0.2313 -4.9248 -0.9048 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000229752862.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:01:53 Heat of formation + Delta-G solvation = 149.685719 kcal Electronic energy + Delta-G solvation = -17781.674935 eV Core-core repulsion = 14769.257498 eV Total energy + Delta-G solvation = -3012.417437 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.058 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.76281 -39.28822 -37.63575 -36.48518 -33.70210 -32.57820 -30.94585 -30.32227 -27.92150 -26.20374 -24.36023 -23.64535 -22.41763 -20.74486 -18.50387 -17.92287 -17.21368 -16.57809 -16.06156 -15.33221 -14.70563 -14.55133 -14.33570 -14.20738 -13.54156 -13.24143 -12.78569 -12.19487 -12.02303 -11.71069 -11.47523 -11.39460 -11.27871 -11.04594 -10.93050 -10.40007 -10.03858 -9.97565 -9.74491 -9.49863 -9.11338 -8.72657 -7.89675 -6.38837 -4.44073 0.50791 0.83891 1.40343 1.93581 2.65255 3.12835 3.21621 3.24802 3.41908 3.54235 3.85918 4.20816 4.32457 4.77723 4.97954 5.07405 5.32534 5.49993 5.62253 5.73497 6.01392 6.16822 6.22855 6.35752 6.57134 6.65421 7.14831 7.17473 7.49010 7.63686 7.85304 8.02846 8.60156 9.22594 10.71667 Molecular weight = 267.06amu Principal moments of inertia in cm(-1) A = 0.020207 B = 0.006306 C = 0.004898 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1385.304180 B = 4438.839725 C = 5715.168147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.465 5.465 3 C 0.184 3.816 4 C -0.527 4.527 5 H 0.070 0.930 6 C 0.065 3.935 7 N -0.888 5.888 8 Si 0.906 3.094 9 H -0.271 1.271 10 H -0.281 1.281 11 H -0.281 1.281 12 C 0.432 3.568 13 C -0.288 4.288 14 C 0.302 3.698 15 Cl 0.005 6.995 16 N -0.500 5.500 17 C 0.482 3.518 18 N -0.538 5.538 19 C 0.246 3.754 20 N -0.331 5.331 21 N -0.340 5.340 22 H 0.040 0.960 23 H 0.079 0.921 24 H 0.100 0.900 25 H 0.027 0.973 26 H 0.052 0.948 27 H 0.268 0.732 28 H 0.190 0.810 29 H 0.230 0.770 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.580 -6.948 -5.262 8.858 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 N -0.175 5.175 3 C 0.062 3.938 4 C -0.566 4.566 5 H 0.088 0.912 6 C -0.139 4.139 7 N -0.526 5.526 8 Si 0.733 3.267 9 H -0.195 1.195 10 H -0.207 1.207 11 H -0.207 1.207 12 C 0.209 3.791 13 C -0.320 4.320 14 C 0.116 3.884 15 Cl 0.034 6.966 16 N -0.223 5.223 17 C 0.121 3.879 18 N -0.272 5.272 19 C -0.056 4.056 20 N -0.161 5.161 21 N -0.124 5.124 22 H 0.059 0.941 23 H 0.098 0.902 24 H 0.118 0.882 25 H 0.045 0.955 26 H 0.070 0.930 27 H 0.077 0.923 28 H 0.207 0.793 29 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges -1.528 -7.775 -5.060 9.402 hybrid contribution -0.245 1.411 0.796 1.639 sum -1.773 -6.364 -4.264 7.863 Atomic orbital electron populations 1.22537 0.81945 1.03193 1.03503 1.58017 1.10524 1.19146 1.29833 1.20386 0.96916 0.77004 0.99496 1.20983 1.37074 0.97463 1.01045 0.91197 1.24940 0.94539 0.96958 0.97471 1.69918 1.36835 1.11847 1.33988 0.86304 0.78425 0.79304 0.82665 1.19495 1.20656 1.20719 1.19552 0.91310 0.81263 0.87002 1.21905 1.09512 1.04497 0.96061 1.21774 0.89041 0.88359 0.89233 1.98439 1.59022 1.80226 1.58927 1.67122 1.16681 1.11089 1.27448 1.22274 0.92382 0.88926 0.84348 1.70938 1.18812 1.13663 1.23811 1.26254 0.94248 0.96774 0.88330 1.78446 1.16603 1.01244 1.19789 1.48853 1.32585 1.09370 1.21588 0.94091 0.90227 0.88187 0.95540 0.92964 0.92260 0.79264 0.75442 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.57 9.20 60.07 0.55 1.12 15 2 N -0.46 -9.17 4.80 -181.95 -0.87 -10.05 15 3 C 0.18 4.06 3.41 -4.97 -0.02 4.04 15 4 C -0.53 -12.97 8.51 -34.44 -0.29 -13.26 15 5 H 0.07 1.72 7.10 -52.49 -0.37 1.35 15 6 C 0.06 1.63 5.46 -17.82 -0.10 1.53 15 7 N -0.89 -23.24 13.29 55.43 0.74 -22.50 15 8 Si 0.91 19.61 29.54 -169.99 -5.02 14.59 15 9 H -0.27 -5.80 7.11 56.52 0.40 -5.40 15 10 H -0.28 -6.10 7.11 56.52 0.40 -5.70 15 11 H -0.28 -6.05 7.11 56.52 0.40 -5.65 15 12 C 0.43 8.00 6.49 -152.94 -0.99 7.01 15 13 C -0.29 -4.88 8.66 -39.20 -0.34 -5.22 15 14 C 0.30 4.89 7.31 -17.13 -0.13 4.76 15 15 Cl 0.01 0.07 29.12 -51.86 -1.51 -1.44 15 16 N -0.50 -8.98 10.45 -11.05 -0.12 -9.10 15 17 C 0.48 8.95 8.99 -323.16 -2.91 6.04 15 18 N -0.54 -9.38 11.26 -15.66 -0.18 -9.56 15 19 C 0.25 3.57 12.98 -91.96 -1.19 2.37 15 20 N -0.33 -5.62 10.88 29.26 0.32 -5.30 15 21 N -0.34 -6.26 3.75 -12.99 -0.05 -6.31 15 22 H 0.04 0.68 8.14 -51.93 -0.42 0.26 15 23 H 0.08 1.34 6.07 -51.93 -0.32 1.02 15 24 H 0.10 1.77 6.86 -51.93 -0.36 1.41 15 25 H 0.03 0.60 7.93 -51.93 -0.41 0.19 15 26 H 0.05 1.20 6.70 -51.93 -0.35 0.85 15 27 H 0.27 6.65 8.31 -40.82 -0.34 6.31 15 28 H 0.19 3.15 5.84 -52.49 -0.31 2.85 15 29 H 0.23 2.05 8.06 -52.49 -0.42 1.63 15 LS Contribution 270.44 15.07 4.08 4.08 Total: -1.00 -27.95 270.44 -10.12 -38.07 By element: Atomic # 1 Polarization: 1.21 SS G_CDS: -2.09 Total: -0.88 kcal Atomic # 6 Polarization: 13.81 SS G_CDS: -5.41 Total: 8.40 kcal Atomic # 7 Polarization: -62.65 SS G_CDS: -0.16 Total: -62.81 kcal Atomic # 14 Polarization: 19.61 SS G_CDS: -5.02 Total: 14.59 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.51 Total: -1.44 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -27.95 -10.12 -38.07 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000229752862.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 187.756 kcal (2) G-P(sol) polarization free energy of solvation -27.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 159.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.070 kcal (6) G-S(sol) free energy of system = (1) + (5) 149.686 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds