Wall clock time and date at job start Mon Mar 30 2020 04:55:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.32545 * 120.43935 * 2 1 4 4 C 1.31865 * 121.07548 * 179.97438 * 3 2 1 5 5 Cl 1.73603 * 119.00846 * 180.02562 * 4 3 2 6 6 N 1.31895 * 121.98353 * 359.71277 * 4 3 2 7 7 C 1.32930 * 120.74585 * 0.57578 * 6 4 3 8 8 N 1.38594 * 120.56836 * 179.71569 * 7 6 4 9 9 C 1.36891 * 119.99994 * 264.50731 * 8 7 6 10 10 H 1.07993 * 119.99929 * 320.65158 * 9 8 7 11 11 C 1.38817 * 119.99743 * 140.64905 * 9 8 7 12 12 N 1.31560 * 119.99550 * 163.78833 * 11 9 8 13 13 Si 1.86797 * 120.00216 * 343.79484 * 11 9 8 14 14 H 1.48500 * 109.47100 * 95.52342 * 13 11 9 15 15 H 1.48506 * 109.46757 * 215.51955 * 13 11 9 16 16 H 1.48498 * 109.46971 * 335.51704 * 13 11 9 17 17 C 1.46497 * 120.00302 * 84.50546 * 8 7 6 18 18 C 1.47210 * 109.46940 * 84.21697 * 17 8 7 19 19 N 5.14343 * 106.80764 * 151.35451 * 2 1 3 20 20 C 1.38767 * 120.44192 * 179.97438 * 2 1 3 21 21 N 1.39890 * 120.89624 * 0.04685 * 20 2 1 22 22 H 1.09004 * 109.47083 * 270.02427 * 1 2 3 23 23 H 1.08994 * 109.47402 * 30.02746 * 1 2 3 24 24 H 1.09003 * 109.46952 * 150.02627 * 1 2 3 25 25 H 0.96998 * 120.00161 * 180.02562 * 12 11 9 26 26 H 1.08997 * 109.47420 * 324.22176 * 17 8 7 27 27 H 1.08996 * 109.47761 * 204.21657 * 17 8 7 28 28 H 0.97005 * 120.00585 * 181.89212 * 21 20 2 29 29 H 0.97006 * 120.00024 * 1.88650 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1785 1.1428 0.0000 4 6 3.4971 1.1574 0.0005 5 17 4.3221 2.6849 0.0012 6 7 4.2081 0.0465 0.0066 7 6 3.6122 -1.1418 0.0011 8 7 4.3630 -2.3067 0.0017 9 6 4.6436 -2.9407 -1.1787 10 1 3.8912 -3.0020 -1.9509 11 6 5.8955 -3.5047 -1.3830 12 7 6.0744 -4.3749 -2.3533 13 14 7.3259 -3.0282 -0.2802 14 1 7.4601 -4.0231 0.8140 15 1 8.5778 -2.9984 -1.0785 16 1 7.0770 -1.6843 0.3004 17 6 4.8563 -2.8597 1.2654 18 6 3.8052 -3.6846 1.8835 19 7 2.9943 -4.3211 2.3604 20 6 2.2101 -1.1964 0.0005 21 7 1.5392 -2.4239 0.0001 22 1 -0.3633 0.0004 1.0277 23 1 -0.3634 0.8897 -0.5142 24 1 -0.3633 -0.8902 -0.5134 25 1 6.9491 -4.7693 -2.4959 26 1 5.1222 -2.0453 1.9392 27 1 5.7355 -3.4749 1.0743 28 1 2.0432 -3.2522 0.0282 29 1 0.5698 -2.4467 -0.0282 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000235816480.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:55:30 Heat of formation + Delta-G solvation = 103.766431 kcal Electronic energy + Delta-G solvation = -18026.975215 eV Core-core repulsion = 15012.566569 eV Total energy + Delta-G solvation = -3014.408646 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.058 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -40.69338 -37.35331 -36.41269 -35.41550 -35.02344 -33.22739 -31.80036 -29.81485 -28.22119 -27.17701 -24.58637 -22.80408 -21.26751 -18.76424 -17.91817 -17.27073 -16.53965 -16.22662 -15.50712 -15.41742 -14.84650 -14.54924 -13.65980 -13.24643 -13.05195 -12.95874 -12.63432 -12.45060 -12.31739 -12.01634 -11.70687 -11.42764 -11.14783 -11.02243 -10.88323 -10.58413 -10.36453 -9.98901 -9.87255 -9.26264 -8.76760 -7.75460 -7.33577 -6.38232 -4.03298 1.40662 1.44595 1.94555 2.99732 3.08254 3.20046 3.33457 3.37836 3.99738 4.07779 4.14467 4.20418 4.47451 4.55017 4.94460 5.02717 5.17044 5.45986 5.57176 5.61406 5.73379 5.88202 5.90454 6.37647 7.14897 7.53843 7.63501 7.91710 7.97809 8.02129 8.41149 8.49158 9.18290 9.42429 10.73145 Molecular weight = 267.06amu Principal moments of inertia in cm(-1) A = 0.016674 B = 0.008857 C = 0.006901 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1678.854813 B = 3160.675775 C = 4056.506466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.093 3.907 3 N -0.481 5.481 4 C 0.307 3.693 5 Cl -0.008 7.008 6 N -0.480 5.480 7 C 0.390 3.610 8 N -0.526 5.526 9 C -0.297 4.297 10 H 0.094 0.906 11 C 0.057 3.943 12 N -0.876 5.876 13 Si 0.866 3.134 14 H -0.276 1.276 15 H -0.288 1.288 16 H -0.246 1.246 17 C 0.217 3.783 18 C 0.202 3.798 19 N -0.454 5.454 20 C 0.129 3.871 21 N -0.844 5.844 22 H 0.076 0.924 23 H 0.081 0.919 24 H 0.071 0.929 25 H 0.273 0.727 26 H 0.097 0.903 27 H 0.108 0.892 28 H 0.412 0.588 29 H 0.396 0.604 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.187 7.158 5.357 10.873 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.057 4.057 3 N -0.199 5.199 4 C 0.010 3.990 5 Cl 0.020 6.980 6 N -0.200 5.200 7 C 0.146 3.854 8 N -0.245 5.245 9 C -0.424 4.424 10 H 0.111 0.889 11 C -0.149 4.149 12 N -0.513 5.513 13 Si 0.693 3.307 14 H -0.204 1.204 15 H -0.215 1.215 16 H -0.169 1.169 17 C 0.088 3.912 18 C -0.118 4.118 19 N -0.133 5.133 20 C 0.013 3.987 21 N -0.384 5.384 22 H 0.095 0.905 23 H 0.100 0.900 24 H 0.090 0.910 25 H 0.084 0.916 26 H 0.114 0.886 27 H 0.125 0.875 28 H 0.244 0.756 29 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges -6.680 7.102 5.918 11.406 hybrid contribution 0.892 -0.524 0.068 1.037 sum -5.788 6.578 5.986 10.612 Atomic orbital electron populations 1.20507 0.88065 1.03347 1.02891 1.20830 0.96662 0.85687 1.02542 1.67339 1.08355 1.30012 1.14184 1.22249 0.85578 0.87652 1.03504 1.98365 1.77228 1.25568 1.96886 1.67902 1.42264 0.97487 1.12331 1.18128 0.86342 0.85866 0.95036 1.41121 1.61971 1.18449 1.02965 1.18703 0.98106 1.32244 0.93365 0.88885 1.25493 0.97266 0.95912 0.96233 1.69724 1.24304 1.25863 1.31392 0.87064 0.82557 0.80762 0.80283 1.20395 1.21500 1.16901 1.19207 0.90573 0.94638 0.86736 1.30941 0.95080 0.93480 0.92252 1.81018 1.11104 1.10805 1.10411 1.19825 0.93559 0.88379 0.96910 1.42410 1.08703 1.05080 1.82221 0.90506 0.90007 0.91039 0.91647 0.88562 0.87505 0.75643 0.77498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.01 9.82 36.01 0.35 -0.66 15 2 C 0.09 1.49 6.84 -82.09 -0.56 0.93 15 3 N -0.48 -8.49 10.33 -7.82 -0.08 -8.57 15 4 C 0.31 5.79 8.17 -92.01 -0.75 5.04 15 5 Cl -0.01 -0.13 29.26 -51.86 -1.52 -1.64 15 6 N -0.48 -9.98 10.43 -10.70 -0.11 -10.09 15 7 C 0.39 7.91 6.10 -154.51 -0.94 6.97 15 8 N -0.53 -11.14 1.47 -117.80 -0.17 -11.31 15 9 C -0.30 -7.31 9.89 -15.08 -0.15 -7.46 15 10 H 0.09 2.51 8.06 -52.49 -0.42 2.09 15 11 C 0.06 1.44 5.36 -17.45 -0.09 1.34 15 12 N -0.88 -23.85 13.96 55.49 0.77 -23.08 15 13 Si 0.87 19.06 24.72 -169.99 -4.20 14.86 15 14 H -0.28 -5.66 6.76 56.52 0.38 -5.28 15 15 H -0.29 -6.58 7.11 56.52 0.40 -6.17 15 16 H -0.25 -5.34 7.03 56.52 0.40 -4.94 15 17 C 0.22 4.07 4.63 -6.83 -0.03 4.03 15 18 C 0.20 3.72 14.41 -20.76 -0.30 3.42 15 19 N -0.45 -8.60 18.54 42.15 0.78 -7.82 15 20 C 0.13 2.26 6.82 -83.20 -0.57 1.70 15 21 N -0.84 -12.93 8.99 32.70 0.29 -12.64 15 22 H 0.08 0.75 8.14 -51.93 -0.42 0.33 15 23 H 0.08 0.86 8.14 -51.93 -0.42 0.44 15 24 H 0.07 0.67 6.62 -51.93 -0.34 0.33 15 25 H 0.27 7.02 8.31 -40.82 -0.34 6.68 15 26 H 0.10 1.58 8.09 -51.93 -0.42 1.16 15 27 H 0.11 2.08 3.36 -51.93 -0.17 1.91 15 28 H 0.41 7.14 6.86 -40.82 -0.28 6.86 15 29 H 0.40 4.73 6.96 -40.82 -0.28 4.45 15 LS Contribution 275.19 15.07 4.15 4.15 Total: -1.00 -27.91 275.19 -5.06 -32.97 By element: Atomic # 1 Polarization: 9.78 SS G_CDS: -1.93 Total: 7.85 kcal Atomic # 6 Polarization: 18.36 SS G_CDS: -3.04 Total: 15.32 kcal Atomic # 7 Polarization: -74.99 SS G_CDS: 1.48 Total: -73.50 kcal Atomic # 14 Polarization: 19.06 SS G_CDS: -4.20 Total: 14.86 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -1.52 Total: -1.64 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -27.91 -5.06 -32.97 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000235816480.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.736 kcal (2) G-P(sol) polarization free energy of solvation -27.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.970 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds