Wall clock time and date at job start Mon Mar 30 2020 04:39:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.30255 * 125.61644 * 2 1 4 4 C 1.34476 * 108.69842 * 179.97438 * 3 2 1 5 5 C 1.34333 * 107.66811 * 0.02562 * 4 3 2 6 6 C 1.50701 * 126.44115 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.47064 * 89.99928 * 6 5 4 8 8 C 1.35218 * 127.23165 * 269.68586 * 7 6 5 9 9 Cl 1.73599 * 126.32890 * 359.97438 * 8 7 6 10 10 N 1.35948 * 107.34649 * 179.85040 * 8 7 6 11 11 H 0.97005 * 124.86556 * 180.14249 * 10 8 7 12 12 N 1.28466 * 110.27099 * 0.43166 * 10 8 7 13 13 C 1.32771 * 109.96714 * 359.73452 * 12 10 8 14 14 C 1.41413 * 126.56090 * 180.02562 * 13 12 10 15 15 H 1.08000 * 120.00205 * 179.97438 * 14 13 12 16 16 C 1.39853 * 119.99996 * 359.97438 * 14 13 12 17 17 N 1.30889 * 119.99851 * 0.02562 * 16 14 13 18 18 Si 1.86804 * 119.99803 * 179.97438 * 16 14 13 19 19 H 1.48506 * 109.47017 * 60.00539 * 18 16 14 20 20 H 1.48500 * 109.46975 * 180.02562 * 18 16 14 21 21 H 1.48493 * 109.47268 * 300.00217 * 18 16 14 22 22 O 1.33963 * 125.61979 * 180.29315 * 2 1 3 23 23 H 1.08993 * 109.47378 * 90.01919 * 1 2 3 24 24 H 1.08999 * 109.46896 * 210.02542 * 1 2 3 25 25 H 1.09004 * 109.46900 * 330.02029 * 1 2 3 26 26 H 1.08003 * 126.16491 * 179.97438 * 4 3 2 27 27 H 1.09002 * 109.47060 * 209.99892 * 6 5 4 28 28 H 1.09001 * 109.47380 * 329.99979 * 6 5 4 29 29 H 0.97006 * 119.99681 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2656 1.0589 0.0000 4 6 3.5522 0.6676 0.0006 5 6 3.5698 -0.6757 0.0004 6 6 4.7937 -1.5549 0.0003 7 6 5.2016 -1.8482 1.4211 8 6 6.0557 -1.1362 2.1906 9 17 6.9016 0.3063 1.7244 10 7 6.1274 -1.7573 3.3978 11 1 6.6688 -1.4569 4.1446 12 7 5.3803 -2.8023 3.4058 13 6 4.7739 -2.9352 2.2321 14 6 3.8745 -3.9609 1.8600 15 1 3.4401 -3.9658 0.8712 16 6 3.5475 -4.9692 2.7724 17 7 4.0736 -4.9630 3.9708 18 14 2.3587 -6.3238 2.2810 19 1 2.9035 -7.0605 1.1123 20 1 2.1796 -7.2617 3.4182 21 1 1.0478 -5.7258 1.9220 22 8 2.2873 -1.0890 -0.0056 23 1 -0.3634 -0.0003 -1.0276 24 1 -0.3633 -0.8898 0.5142 25 1 -0.3633 0.8902 0.5135 26 1 4.4157 1.3163 0.0003 27 1 4.5696 -2.4896 -0.5137 28 1 5.6081 -1.0440 -0.5134 29 1 3.8464 -5.6622 4.6038 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260008442.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:39:48 Heat of formation + Delta-G solvation = 75.615625 kcal Electronic energy + Delta-G solvation = -17761.839944 eV Core-core repulsion = 14713.917836 eV Total energy + Delta-G solvation = -3047.922108 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.052 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -42.74933 -40.65616 -36.08727 -34.18609 -33.75513 -33.19006 -31.04632 -29.45266 -27.73307 -25.77252 -24.79803 -21.78099 -20.76713 -20.42851 -19.02117 -17.33278 -16.46724 -16.35805 -16.10571 -14.76793 -14.43628 -13.95376 -13.68420 -13.44431 -13.05723 -12.84475 -12.55003 -12.39661 -12.20066 -11.56788 -11.38362 -11.09603 -11.04031 -10.83183 -10.74160 -10.54573 -10.10126 -10.00612 -9.33770 -8.68043 -8.12263 -7.75506 -7.51052 -6.42301 -4.31764 2.00630 2.49077 2.92783 3.12227 3.18533 3.19430 3.21527 3.33096 4.10739 4.18825 4.48098 4.52321 5.31607 5.46396 5.52459 5.56374 5.58059 5.81510 5.89224 6.06541 6.24264 6.38304 6.52735 6.71831 6.83574 7.01371 7.28242 7.45961 8.14131 8.24170 8.55315 8.77900 9.09410 9.97148 10.55020 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.013586 B = 0.009312 C = 0.005952 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2060.416417 B = 3006.202622 C = 4703.112217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 C 0.163 3.837 3 N -0.488 5.488 4 C -0.061 4.061 5 C 0.001 3.999 6 C 0.057 3.943 7 C -0.245 4.245 8 C 0.054 3.946 9 Cl -0.059 7.059 10 N -0.421 5.421 11 H 0.424 0.576 12 N -0.314 5.314 13 C 0.213 3.787 14 C -0.441 4.441 15 H 0.082 0.918 16 C 0.074 3.926 17 N -0.777 5.777 18 Si 0.906 3.094 19 H -0.267 1.267 20 H -0.282 1.282 21 H -0.268 1.268 22 O -0.188 6.188 23 H 0.085 0.915 24 H 0.086 0.914 25 H 0.093 0.907 26 H 0.175 0.825 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.161 6.468 -5.841 8.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.044 4.044 3 N -0.218 5.218 4 C -0.199 4.199 5 C -0.053 4.053 6 C 0.019 3.981 7 C -0.260 4.260 8 C -0.101 4.101 9 Cl -0.032 7.032 10 N -0.129 5.129 11 H 0.264 0.736 12 N -0.148 5.148 13 C 0.066 3.934 14 C -0.480 4.480 15 H 0.100 0.900 16 C -0.146 4.146 17 N -0.405 5.405 18 Si 0.731 3.269 19 H -0.192 1.192 20 H -0.207 1.207 21 H -0.192 1.192 22 O -0.074 6.074 23 H 0.104 0.896 24 H 0.105 0.895 25 H 0.112 0.888 26 H 0.192 0.808 27 H 0.107 0.893 28 H 0.107 0.893 29 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -1.215 6.559 -4.589 8.096 hybrid contribution 0.181 -0.500 -0.407 0.670 sum -1.034 6.059 -4.995 7.920 Atomic orbital electron populations 1.20124 0.82144 1.04720 1.03903 1.26043 0.96306 0.79231 1.02806 1.70301 1.02287 1.30566 1.18680 1.22819 0.94576 0.93096 1.09412 1.23779 0.83616 0.95232 1.02697 1.18080 0.88404 0.97640 0.94003 1.19412 1.07830 1.01784 0.96965 1.21814 1.04572 0.92132 0.91603 1.98288 1.77334 1.36451 1.91125 1.43769 1.38114 1.21031 1.09968 0.73596 1.74930 1.13429 1.03758 1.22690 1.18994 0.94701 0.92559 0.87099 1.18484 1.23517 1.05989 1.00025 0.90015 1.25762 0.95932 0.98395 0.94462 1.69931 1.35776 1.30365 1.04388 0.86420 0.81189 0.80561 0.78740 1.19203 1.20678 1.19241 1.84449 1.16781 1.37118 1.69077 0.89629 0.89515 0.88785 0.80822 0.89269 0.89265 0.91805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.61 10.51 36.01 0.38 -0.23 15 2 C 0.16 2.85 8.34 -12.94 -0.11 2.75 15 3 N -0.49 -9.12 11.29 -11.10 -0.13 -9.25 15 4 C -0.06 -1.12 11.80 -17.77 -0.21 -1.32 15 5 C 0.00 0.02 6.62 -35.69 -0.24 -0.22 15 6 C 0.06 1.08 6.01 -29.03 -0.17 0.91 15 7 C -0.24 -5.51 5.50 -104.17 -0.57 -6.08 15 8 C 0.05 1.12 7.86 -16.80 -0.13 0.98 15 9 Cl -0.06 -0.97 29.04 -51.86 -1.51 -2.47 15 10 N -0.42 -9.23 6.87 32.88 0.23 -9.01 15 11 H 0.42 7.73 8.96 -190.44 -1.71 6.02 15 12 N -0.31 -8.32 10.49 32.33 0.34 -7.98 15 13 C 0.21 5.66 6.78 -84.73 -0.57 5.09 15 14 C -0.44 -11.86 9.22 -37.77 -0.35 -12.20 15 15 H 0.08 2.08 7.54 -52.49 -0.40 1.69 15 16 C 0.07 1.93 5.49 -17.35 -0.10 1.83 15 17 N -0.78 -21.34 11.97 55.54 0.66 -20.67 15 18 Si 0.91 19.41 29.56 -169.99 -5.02 14.39 15 19 H -0.27 -5.60 7.11 56.52 0.40 -5.19 15 20 H -0.28 -5.93 7.11 56.52 0.40 -5.53 15 21 H -0.27 -5.66 7.11 56.52 0.40 -5.26 15 22 O -0.19 -3.78 10.77 5.39 0.06 -3.72 15 23 H 0.09 0.82 8.14 -51.93 -0.42 0.39 15 24 H 0.09 0.96 8.14 -51.93 -0.42 0.54 15 25 H 0.09 0.98 8.14 -51.93 -0.42 0.56 15 26 H 0.17 2.82 8.06 -52.48 -0.42 2.39 15 27 H 0.09 1.66 7.79 -51.93 -0.40 1.26 15 28 H 0.09 1.43 8.02 -51.93 -0.42 1.01 15 29 H 0.27 6.89 8.30 -40.82 -0.34 6.56 15 LS Contribution 282.56 15.07 4.26 4.26 Total: -1.00 -31.58 282.56 -6.93 -38.52 By element: Atomic # 1 Polarization: 8.19 SS G_CDS: -3.75 Total: 4.44 kcal Atomic # 6 Polarization: -6.43 SS G_CDS: -2.07 Total: -8.50 kcal Atomic # 7 Polarization: -48.02 SS G_CDS: 1.10 Total: -46.92 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: 0.06 Total: -3.72 kcal Atomic # 14 Polarization: 19.41 SS G_CDS: -5.02 Total: 14.39 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.51 Total: -2.47 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -31.58 -6.93 -38.52 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260008442.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.132 kcal (2) G-P(sol) polarization free energy of solvation -31.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.548 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.516 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds