Wall clock time and date at job start Mon Mar 30 2020 04:39:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38432 * 126.34503 * 2 1 4 4 C 1.47101 * 126.44621 * 0.02562 * 3 2 1 5 5 O 1.35150 * 126.58824 * 0.05170 * 4 3 2 6 6 C 1.35013 * 107.61045 * 179.97438 * 5 4 3 7 7 C 1.39300 * 125.50758 * 179.97438 * 6 5 4 8 8 H 1.07998 * 120.00037 * 0.02562 * 7 6 5 9 9 C 1.40240 * 120.00164 * 180.02562 * 7 6 5 10 10 N 1.30708 * 119.99856 * 0.02562 * 9 7 6 11 11 Si 1.86793 * 120.00192 * 180.02562 * 9 7 6 12 12 H 1.48500 * 109.47171 * 90.00291 * 11 9 7 13 13 H 1.48505 * 109.47323 * 210.00217 * 11 9 7 14 14 H 1.48500 * 109.47343 * 329.99887 * 11 9 7 15 15 N 1.33073 * 108.98021 * 359.97438 * 6 5 4 16 16 C 1.32604 * 108.98437 * 0.02562 * 15 6 5 17 17 Cl 1.73598 * 126.19732 * 179.97438 * 16 15 6 18 18 C 1.41431 * 107.10457 * 180.28708 * 3 2 1 19 19 N 1.30452 * 108.08572 * 359.55181 * 18 3 2 20 20 N 1.34591 * 126.33870 * 180.02562 * 2 1 3 21 21 C 1.46502 * 125.75785 * 359.95199 * 20 2 1 22 22 H 1.09003 * 109.47448 * 89.99699 * 1 2 3 23 23 H 1.08997 * 109.47698 * 209.99782 * 1 2 3 24 24 H 1.09000 * 109.47395 * 330.00161 * 1 2 3 25 25 H 0.96994 * 120.00200 * 180.02562 * 10 9 7 26 26 H 1.08000 * 125.95797 * 179.70391 * 18 3 2 27 27 H 1.08992 * 109.46788 * 90.00387 * 21 20 2 28 28 H 1.09001 * 109.46935 * 210.00355 * 21 20 2 29 29 H 1.09003 * 109.47148 * 330.00375 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3274 1.1150 0.0000 4 6 1.8922 2.5202 0.0005 5 8 0.6173 2.9686 0.0021 6 6 0.6589 4.3181 0.0026 7 6 -0.4495 5.1618 0.0036 8 1 -1.4457 4.7446 0.0045 9 6 -0.2719 6.5529 0.0036 10 7 0.9337 7.0578 0.0020 11 14 -1.7583 7.6843 0.0057 12 1 -2.1502 7.9840 1.4063 13 1 -1.4188 8.9490 -0.6947 14 1 -2.8875 7.0194 -0.6929 15 7 1.9301 4.7119 0.0020 16 6 2.7132 3.6418 0.0005 17 17 4.4491 3.6417 -0.0015 18 6 3.6627 0.6490 -0.0068 19 7 3.6364 -0.6553 -0.0008 20 7 2.3045 -1.0842 -0.0005 21 6 1.8541 -2.4782 -0.0001 22 1 -0.3634 0.0001 -1.0277 23 1 -0.3634 -0.8899 0.5138 24 1 -0.3634 0.8900 0.5138 25 1 1.0566 8.0199 0.0023 26 1 4.5495 1.2654 -0.0130 27 1 1.7418 -2.8240 -1.0276 28 1 2.5897 -3.0975 0.5133 29 1 0.8958 -2.5504 0.5143 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260077061.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:39:31 Heat of formation + Delta-G solvation = 78.213345 kcal Electronic energy + Delta-G solvation = -17573.363667 eV Core-core repulsion = 14525.554205 eV Total energy + Delta-G solvation = -3047.809462 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.052 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.15521 -40.47100 -35.79906 -34.10129 -33.27843 -32.45900 -31.82857 -29.24106 -27.31625 -26.44042 -24.51352 -21.54659 -21.11249 -19.91869 -18.96276 -17.61476 -16.18866 -15.79138 -15.44542 -14.78008 -14.69050 -14.32296 -13.82162 -13.21158 -12.95584 -12.71624 -12.51712 -12.30836 -12.21708 -11.76493 -11.51467 -11.48186 -11.40415 -11.01052 -10.53596 -10.32333 -9.98701 -9.83678 -9.04793 -8.92709 -8.68565 -8.42809 -6.89153 -6.83470 -4.68657 1.98533 2.57303 2.79146 2.90986 2.95597 2.98565 3.03464 3.72568 3.74263 4.25986 4.52317 4.74578 5.07197 5.14676 5.16916 5.31069 5.39319 5.52417 5.83635 6.03069 6.18894 6.30635 6.40780 6.54533 6.89722 7.01161 7.28742 7.40457 7.64472 7.92091 8.11505 8.32211 8.51523 9.66290 10.07267 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.025950 B = 0.005993 C = 0.004886 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1078.731982 B = 4670.851234 C = 5729.136100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C 0.061 3.939 3 C -0.107 4.107 4 C -0.107 4.107 5 O -0.229 6.229 6 C 0.341 3.659 7 C -0.420 4.420 8 H 0.098 0.902 9 C 0.072 3.928 10 N -0.714 5.714 11 Si 0.930 3.070 12 H -0.266 1.266 13 H -0.273 1.273 14 H -0.259 1.259 15 N -0.523 5.523 16 C 0.105 3.895 17 Cl -0.045 7.045 18 C 0.060 3.940 19 N -0.308 5.308 20 N -0.376 5.376 21 C 0.106 3.894 22 H 0.075 0.925 23 H 0.061 0.939 24 H 0.093 0.907 25 H 0.283 0.717 26 H 0.185 0.815 27 H 0.069 0.931 28 H 0.085 0.915 29 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.631 -9.735 0.067 9.871 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.066 4.066 3 C -0.118 4.118 4 C -0.164 4.164 5 O -0.126 6.126 6 C 0.161 3.839 7 C -0.454 4.454 8 H 0.116 0.884 9 C -0.155 4.155 10 N -0.337 5.337 11 Si 0.753 3.247 12 H -0.191 1.191 13 H -0.198 1.198 14 H -0.182 1.182 15 N -0.254 5.254 16 C -0.052 4.052 17 Cl -0.017 7.017 18 C -0.126 4.126 19 N -0.129 5.129 20 N -0.159 5.159 21 C -0.036 4.036 22 H 0.093 0.907 23 H 0.080 0.920 24 H 0.111 0.889 25 H 0.094 0.906 26 H 0.202 0.798 27 H 0.088 0.912 28 H 0.103 0.897 29 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.554 -10.093 0.068 10.108 hybrid contribution -0.909 0.573 -0.020 1.075 sum -1.463 -9.520 0.048 9.632 Atomic orbital electron populations 1.20357 0.87145 1.03487 1.02985 1.21347 0.94267 0.86463 1.04555 1.17604 0.91674 0.88193 1.14346 1.19329 0.81525 0.90329 1.25218 1.84554 1.26895 1.24521 1.76656 1.21848 0.92463 0.76344 0.93259 1.18154 0.91345 0.89338 1.46521 0.88370 1.25928 0.97803 0.98347 0.93471 1.70019 1.22267 1.14202 1.27187 0.85948 0.80438 0.78814 0.79483 1.19060 1.19788 1.18228 1.71048 0.99235 1.25498 1.29623 1.22247 0.85323 0.91024 1.06560 1.98235 1.07987 1.98175 1.97302 1.24021 0.97344 0.91199 1.00015 1.76969 0.96511 1.13208 1.26192 1.47895 1.03919 1.05531 1.58565 1.21720 1.00682 0.78298 1.02859 0.90686 0.92020 0.88858 0.90564 0.79831 0.91225 0.89671 0.89885 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.21 9.75 36.00 0.35 -0.86 15 2 C 0.06 1.10 7.03 -81.31 -0.57 0.53 15 3 C -0.11 -2.27 6.13 -105.02 -0.64 -2.91 15 4 C -0.11 -2.60 7.22 -35.71 -0.26 -2.86 15 5 O -0.23 -5.85 9.20 1.33 0.01 -5.84 15 6 C 0.34 9.38 7.70 -16.62 -0.13 9.25 15 7 C -0.42 -10.80 9.43 -38.44 -0.36 -11.16 15 8 H 0.10 2.30 7.85 -52.49 -0.41 1.88 15 9 C 0.07 1.74 5.50 -17.28 -0.10 1.64 15 10 N -0.71 -18.56 11.85 55.56 0.66 -17.90 15 11 Si 0.93 17.55 29.56 -169.99 -5.03 12.52 15 12 H -0.27 -4.92 7.11 56.52 0.40 -4.52 15 13 H -0.27 -5.04 7.11 56.52 0.40 -4.64 15 14 H -0.26 -4.73 7.11 56.52 0.40 -4.33 15 15 N -0.52 -14.81 9.35 -10.02 -0.09 -14.90 15 16 C 0.10 2.67 7.82 -16.94 -0.13 2.54 15 17 Cl -0.05 -0.95 26.52 -51.86 -1.38 -2.33 15 18 C 0.06 1.17 11.33 -16.92 -0.19 0.98 15 19 N -0.31 -5.69 12.49 30.89 0.39 -5.31 15 20 N -0.38 -6.14 3.99 -63.16 -0.25 -6.39 15 21 C 0.11 1.11 11.25 59.85 0.67 1.78 15 22 H 0.07 1.04 8.14 -51.93 -0.42 0.62 15 23 H 0.06 0.70 7.07 -51.93 -0.37 0.33 15 24 H 0.09 1.58 6.75 -51.93 -0.35 1.22 15 25 H 0.28 6.59 8.29 -40.82 -0.34 6.25 15 26 H 0.19 3.37 5.86 -52.49 -0.31 3.06 15 27 H 0.07 0.62 8.14 -51.93 -0.42 0.20 15 28 H 0.08 0.79 8.14 -51.93 -0.42 0.36 15 29 H 0.08 0.68 7.03 -51.93 -0.37 0.31 15 LS Contribution 274.70 15.07 4.14 4.14 Total: -1.00 -31.20 274.70 -5.11 -36.32 By element: Atomic # 1 Polarization: 2.96 SS G_CDS: -2.20 Total: 0.75 kcal Atomic # 6 Polarization: 0.29 SS G_CDS: -1.36 Total: -1.07 kcal Atomic # 7 Polarization: -45.20 SS G_CDS: 0.70 Total: -44.50 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: 0.01 Total: -5.84 kcal Atomic # 14 Polarization: 17.55 SS G_CDS: -5.03 Total: 12.52 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -1.38 Total: -2.33 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -31.20 -5.11 -36.32 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260077061.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.530 kcal (2) G-P(sol) polarization free energy of solvation -31.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.317 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds