Wall clock time and date at job start Mon Mar 30 2020 04:39:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.34850 * 125.98026 * 2 1 4 4 C 1.41346 * 107.88965 * 179.84730 * 3 2 1 5 5 C 1.47088 * 126.05742 * 180.15946 * 4 3 2 6 6 O 1.35162 * 126.59070 * 359.96818 * 5 4 3 7 7 C 1.34981 * 107.60781 * 179.89647 * 6 5 4 8 8 C 1.39303 * 125.51553 * 180.14582 * 7 6 5 9 9 H 1.08004 * 119.99922 * 0.23389 * 8 7 6 10 10 C 1.40301 * 120.00439 * 180.24105 * 8 7 6 11 11 N 1.30660 * 119.99651 * 359.97438 * 10 8 7 12 12 Si 1.86805 * 120.00409 * 179.97438 * 10 8 7 13 13 H 1.48495 * 109.46689 * 59.99743 * 12 10 8 14 14 H 1.48501 * 109.47118 * 180.02562 * 12 10 8 15 15 H 1.48505 * 109.46862 * 299.99913 * 12 10 8 16 16 N 1.33090 * 108.97397 * 0.36728 * 7 6 5 17 17 C 1.32554 * 108.99300 * 359.77472 * 16 7 6 18 18 Cl 1.73600 * 126.19946 * 179.97438 * 17 16 7 19 19 N 1.32233 * 107.88330 * 0.42151 * 4 3 2 20 20 N 1.35792 * 125.96958 * 180.30887 * 2 1 3 21 21 C 1.46497 * 125.93334 * 359.96743 * 20 2 1 22 22 H 1.08999 * 109.47015 * 269.69315 * 1 2 3 23 23 H 1.09000 * 109.46646 * 29.68467 * 1 2 3 24 24 H 1.09000 * 109.47248 * 149.69185 * 1 2 3 25 25 H 1.08000 * 126.05300 * 359.96442 * 3 2 1 26 26 H 0.97002 * 119.99410 * 179.97438 * 11 10 8 27 27 H 1.08998 * 109.47183 * 89.99864 * 21 20 2 28 28 H 1.09001 * 109.47184 * 209.99770 * 21 20 2 29 29 H 1.09003 * 109.47235 * 329.99644 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2993 1.0912 0.0000 4 6 3.6429 0.6523 0.0036 5 6 4.8351 1.5138 0.0081 6 8 4.8525 2.8653 0.0090 7 6 6.1442 3.2570 0.0159 8 6 6.5896 4.5769 0.0219 9 1 5.8760 5.3876 0.0250 10 6 7.9651 4.8532 0.0237 11 7 8.8284 3.8725 0.0203 12 14 8.5623 6.6232 0.0310 13 1 8.0566 7.3112 1.2459 14 1 10.0472 6.6446 0.0312 15 1 8.0579 7.3208 -1.1791 16 7 6.9236 2.1782 0.0112 17 6 6.1602 1.0945 0.0063 18 17 6.7150 -0.5504 -0.0015 19 7 3.6381 -0.6700 -0.0036 20 7 2.3046 -1.0990 -0.0059 21 6 1.8496 -2.4915 -0.0128 22 1 -0.3633 -0.0055 1.0276 23 1 -0.3632 0.8928 -0.5089 24 1 -0.3634 -0.8872 -0.5186 25 1 1.9662 2.1186 -0.0005 26 1 9.7794 4.0636 0.0211 27 1 1.7362 -2.8316 -1.0421 28 1 2.5829 -3.1159 0.4976 29 1 0.8910 -2.5630 0.5012 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260357677.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:39:33 Heat of formation + Delta-G solvation = 79.398860 kcal Electronic energy + Delta-G solvation = -17300.518396 eV Core-core repulsion = 14252.760341 eV Total energy + Delta-G solvation = -3047.758055 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.052 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.10939 -40.37742 -35.63527 -34.17921 -33.20432 -32.49981 -31.69442 -29.32894 -27.05879 -26.64620 -24.80242 -21.57702 -21.12264 -19.63396 -18.91130 -17.50785 -16.31292 -15.78722 -15.34387 -14.78878 -14.69662 -14.16191 -13.60548 -13.23941 -13.16694 -13.05205 -12.41703 -12.18662 -12.14162 -11.86174 -11.60336 -11.43041 -11.36569 -11.04743 -10.59022 -10.24293 -9.85348 -9.78719 -9.05974 -9.00503 -8.47039 -8.12124 -7.17518 -6.89876 -4.81723 2.02042 2.54723 2.82272 2.96737 2.96798 3.00239 3.01323 3.71287 3.79906 4.27094 4.37958 4.86176 4.90949 5.09838 5.19444 5.25819 5.46073 5.51232 5.76997 5.90644 5.95426 6.22619 6.41924 6.62967 6.82187 7.02305 7.30930 7.43707 7.59809 7.86563 8.22412 8.32324 8.44968 9.59860 10.00232 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.030628 B = 0.005273 C = 0.004514 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 913.966419 B = 5308.317746 C = 6201.836359 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.069 3.931 3 C -0.260 4.260 4 C 0.201 3.799 5 C -0.142 4.142 6 O -0.226 6.226 7 C 0.349 3.651 8 C -0.410 4.410 9 H 0.102 0.898 10 C 0.070 3.930 11 N -0.707 5.707 12 Si 0.934 3.066 13 H -0.260 1.260 14 H -0.273 1.273 15 H -0.260 1.260 16 N -0.526 5.526 17 C 0.145 3.855 18 Cl -0.028 7.028 19 N -0.291 5.291 20 N -0.390 5.390 21 C 0.110 3.890 22 H 0.074 0.926 23 H 0.082 0.918 24 H 0.065 0.935 25 H 0.144 0.856 26 H 0.286 0.714 27 H 0.066 0.934 28 H 0.084 0.916 29 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.554 -5.150 0.057 11.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.056 4.056 3 C -0.289 4.289 4 C 0.039 3.961 5 C -0.200 4.200 6 O -0.123 6.123 7 C 0.170 3.830 8 C -0.444 4.444 9 H 0.120 0.880 10 C -0.158 4.158 11 N -0.330 5.330 12 Si 0.756 3.244 13 H -0.184 1.184 14 H -0.198 1.198 15 H -0.184 1.184 16 N -0.258 5.258 17 C -0.016 4.016 18 Cl 0.000 7.000 19 N -0.116 5.116 20 N -0.175 5.175 21 C -0.032 4.032 22 H 0.093 0.907 23 H 0.101 0.899 24 H 0.084 0.916 25 H 0.161 0.839 26 H 0.097 0.903 27 H 0.085 0.915 28 H 0.103 0.897 29 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -9.001 -6.491 0.047 11.098 hybrid contribution -0.825 1.088 -0.006 1.365 sum -9.826 -5.403 0.041 11.214 Atomic orbital electron populations 1.20366 0.87925 1.03324 1.02765 1.20953 0.94098 0.87388 1.03129 1.21189 0.91500 0.98782 1.17472 1.18871 0.90393 0.89683 0.97160 1.18676 0.90292 0.80892 1.30174 1.84541 1.31677 1.18958 1.77085 1.21912 0.74294 0.94637 0.92150 1.18247 0.92868 0.87980 1.45305 0.88026 1.26004 0.95838 1.00566 0.93405 1.69993 1.03533 1.33480 1.25991 0.85941 0.78129 0.79992 0.80293 1.18443 1.19787 1.18449 1.71136 1.30325 0.94577 1.29724 1.22520 0.89094 0.88014 1.01963 1.98277 1.90439 1.14417 1.96897 1.77969 0.94224 1.10452 1.28918 1.48503 1.03888 1.05207 1.59871 1.21630 1.00253 0.78752 1.02546 0.90693 0.89937 0.91604 0.83864 0.90263 0.91540 0.89679 0.90271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.86 9.89 36.01 0.36 -0.50 15 2 C 0.07 1.10 6.93 -82.04 -0.57 0.53 15 3 C -0.26 -5.07 10.68 -39.60 -0.42 -5.49 15 4 C 0.20 4.64 7.09 -82.92 -0.59 4.05 15 5 C -0.14 -3.73 7.32 -35.72 -0.26 -3.99 15 6 O -0.23 -6.15 10.84 1.39 0.02 -6.14 15 7 C 0.35 9.88 7.70 -16.61 -0.13 9.75 15 8 C -0.41 -10.69 9.43 -38.41 -0.36 -11.06 15 9 H 0.10 2.40 7.85 -52.48 -0.41 1.98 15 10 C 0.07 1.70 5.50 -17.27 -0.10 1.61 15 11 N -0.71 -18.42 11.85 55.57 0.66 -17.76 15 12 Si 0.93 17.50 29.56 -169.99 -5.03 12.48 15 13 H -0.26 -4.76 7.11 56.52 0.40 -4.36 15 14 H -0.27 -4.97 7.11 56.52 0.40 -4.57 15 15 H -0.26 -4.76 7.11 56.52 0.40 -4.36 15 16 N -0.53 -15.33 9.35 -10.03 -0.09 -15.42 15 17 C 0.15 3.93 7.82 -16.96 -0.13 3.80 15 18 Cl -0.03 -0.66 28.26 -51.86 -1.47 -2.13 15 19 N -0.29 -6.25 11.61 33.31 0.39 -5.86 15 20 N -0.39 -6.54 4.03 -63.80 -0.26 -6.80 15 21 C 0.11 1.20 11.09 59.85 0.66 1.87 15 22 H 0.07 0.65 8.14 -51.93 -0.42 0.23 15 23 H 0.08 0.75 8.14 -51.93 -0.42 0.33 15 24 H 0.07 0.53 7.72 -51.93 -0.40 0.13 15 25 H 0.14 2.61 8.06 -52.49 -0.42 2.19 15 26 H 0.29 6.64 8.29 -40.82 -0.34 6.30 15 27 H 0.07 0.63 8.14 -51.93 -0.42 0.21 15 28 H 0.08 0.91 8.14 -51.93 -0.42 0.48 15 29 H 0.08 0.61 7.66 -51.93 -0.40 0.22 15 LS Contribution 282.41 15.07 4.26 4.26 Total: -1.00 -32.50 282.41 -5.52 -38.03 By element: Atomic # 1 Polarization: 1.23 SS G_CDS: -2.46 Total: -1.23 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -1.54 Total: 0.57 kcal Atomic # 7 Polarization: -46.53 SS G_CDS: 0.69 Total: -45.84 kcal Atomic # 8 Polarization: -6.15 SS G_CDS: 0.02 Total: -6.14 kcal Atomic # 14 Polarization: 17.50 SS G_CDS: -5.03 Total: 12.48 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.47 Total: -2.13 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -32.50 -5.52 -38.03 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260357677.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.424 kcal (2) G-P(sol) polarization free energy of solvation -32.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.921 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.025 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.399 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds