Wall clock time and date at job start Mon Mar 30 2020 04:39:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.34850 * 125.98026 * 2 1 4 4 C 1.41346 * 107.88965 * 179.84730 * 3 2 1 5 5 C 1.47088 * 126.05742 * 180.15946 * 4 3 2 6 6 O 1.35162 * 126.59070 * 359.96818 * 5 4 3 7 7 C 1.34981 * 107.60781 * 179.89647 * 6 5 4 8 8 C 1.39303 * 125.51553 * 180.14582 * 7 6 5 9 9 H 1.08004 * 119.99922 * 0.23389 * 8 7 6 10 10 C 1.40301 * 120.00439 * 180.24105 * 8 7 6 11 11 N 1.30660 * 119.99651 * 359.97438 * 10 8 7 12 12 Si 1.86805 * 120.00409 * 179.97438 * 10 8 7 13 13 H 1.48495 * 109.46689 * 59.99743 * 12 10 8 14 14 H 1.48501 * 109.47118 * 180.02562 * 12 10 8 15 15 H 1.48505 * 109.46862 * 299.99913 * 12 10 8 16 16 N 1.33090 * 108.97397 * 0.36728 * 7 6 5 17 17 C 1.32554 * 108.99300 * 359.77472 * 16 7 6 18 18 Cl 1.73600 * 126.19946 * 179.97438 * 17 16 7 19 19 N 1.32233 * 107.88330 * 0.42151 * 4 3 2 20 20 N 1.35792 * 125.96958 * 180.30887 * 2 1 3 21 21 C 1.46497 * 125.93334 * 359.96743 * 20 2 1 22 22 H 1.08999 * 109.47015 * 269.69315 * 1 2 3 23 23 H 1.09000 * 109.46646 * 29.68467 * 1 2 3 24 24 H 1.09000 * 109.47248 * 149.69185 * 1 2 3 25 25 H 1.08000 * 126.05300 * 359.96442 * 3 2 1 26 26 H 0.97002 * 119.99410 * 179.97438 * 11 10 8 27 27 H 1.08998 * 109.47183 * 89.99864 * 21 20 2 28 28 H 1.09001 * 109.47184 * 209.99770 * 21 20 2 29 29 H 1.09003 * 109.47235 * 329.99644 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2993 1.0912 0.0000 4 6 3.6429 0.6523 0.0036 5 6 4.8351 1.5138 0.0081 6 8 4.8525 2.8653 0.0090 7 6 6.1442 3.2570 0.0159 8 6 6.5896 4.5769 0.0219 9 1 5.8760 5.3876 0.0250 10 6 7.9651 4.8532 0.0237 11 7 8.8284 3.8725 0.0203 12 14 8.5623 6.6232 0.0310 13 1 8.0566 7.3112 1.2459 14 1 10.0472 6.6446 0.0312 15 1 8.0579 7.3208 -1.1791 16 7 6.9236 2.1782 0.0112 17 6 6.1602 1.0945 0.0063 18 17 6.7150 -0.5504 -0.0015 19 7 3.6381 -0.6700 -0.0036 20 7 2.3046 -1.0990 -0.0059 21 6 1.8496 -2.4915 -0.0128 22 1 -0.3633 -0.0055 1.0276 23 1 -0.3632 0.8928 -0.5089 24 1 -0.3634 -0.8872 -0.5186 25 1 1.9662 2.1186 -0.0005 26 1 9.7794 4.0636 0.0211 27 1 1.7362 -2.8316 -1.0421 28 1 2.5829 -3.1159 0.4976 29 1 0.8910 -2.5630 0.5012 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000260357677.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:39:33 Heat of formation + Delta-G solvation = 55.632177 kcal Electronic energy + Delta-G solvation = -17301.548996 eV Core-core repulsion = 14252.760341 eV Total energy + Delta-G solvation = -3048.788655 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 267.052 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -43.09752 -41.84135 -37.56444 -36.08058 -34.63022 -34.47211 -32.84884 -31.19723 -28.65873 -27.83190 -26.33640 -23.38504 -23.10187 -21.19392 -20.49900 -19.38755 -17.93852 -17.44507 -17.06149 -16.33226 -16.30598 -15.82126 -15.04651 -14.82019 -14.58544 -13.92845 -13.71936 -13.46892 -13.41543 -13.28093 -13.20572 -13.00051 -12.97274 -12.83214 -12.07060 -11.99025 -11.63399 -11.45786 -10.99118 -10.54750 -10.51435 -9.55843 -9.03420 -8.73754 -6.81042 0.26056 0.99920 1.09297 1.40878 1.47301 1.55903 1.62214 2.01895 2.14605 2.38747 2.62167 3.11836 3.73344 3.83861 4.13332 4.36572 4.46695 4.51023 4.62754 4.69368 4.80325 4.84023 4.96853 5.10637 5.19076 5.23212 5.53105 5.68201 5.92368 6.25997 6.28059 6.46931 6.77339 7.56485 8.20301 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.030628 B = 0.005273 C = 0.004514 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 913.966419 B = 5308.317746 C = 6201.836359 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.097 3.903 3 C -0.295 4.295 4 C 0.161 3.839 5 C -0.142 4.142 6 O -0.236 6.236 7 C 0.315 3.685 8 C -0.432 4.432 9 H 0.119 0.881 10 C 0.026 3.974 11 N -0.752 5.752 12 Si 1.022 2.978 13 H -0.250 1.250 14 H -0.263 1.263 15 H -0.250 1.250 16 N -0.561 5.561 17 C 0.111 3.889 18 Cl -0.007 7.007 19 N -0.316 5.316 20 N -0.381 5.381 21 C 0.094 3.906 22 H 0.098 0.902 23 H 0.094 0.906 24 H 0.097 0.903 25 H 0.144 0.856 26 H 0.296 0.704 27 H 0.087 0.913 28 H 0.085 0.915 29 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.846 -5.308 0.070 13.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.030 4.030 3 C -0.324 4.324 4 C 0.000 4.000 5 C -0.200 4.200 6 O -0.133 6.133 7 C 0.136 3.864 8 C -0.465 4.465 9 H 0.136 0.864 10 C -0.198 4.198 11 N -0.375 5.375 12 Si 0.838 3.162 13 H -0.173 1.173 14 H -0.187 1.187 15 H -0.173 1.173 16 N -0.294 5.294 17 C -0.048 4.048 18 Cl 0.021 6.979 19 N -0.142 5.142 20 N -0.165 5.165 21 C -0.045 4.045 22 H 0.116 0.884 23 H 0.113 0.887 24 H 0.116 0.884 25 H 0.162 0.838 26 H 0.107 0.893 27 H 0.105 0.895 28 H 0.104 0.896 29 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -11.302 -6.709 0.058 13.144 hybrid contribution -0.311 0.878 -0.012 0.932 sum -11.613 -5.831 0.046 12.995 Atomic orbital electron populations 1.20612 0.83019 1.05529 1.04864 1.21715 0.96581 0.85656 0.99066 1.21371 0.90625 1.00350 1.20073 1.18890 0.90756 0.90281 1.00054 1.19354 0.91623 0.80766 1.28293 1.84507 1.31688 1.19827 1.77314 1.22538 0.74571 0.95621 0.93650 1.18886 0.94541 0.87635 1.45477 0.86362 1.27263 0.94921 1.05845 0.91783 1.70088 1.04400 1.36579 1.26449 0.84686 0.77791 0.72878 0.80874 1.17314 1.18745 1.17335 1.71052 1.31305 0.95396 1.31605 1.22808 0.89593 0.88850 1.03574 1.98249 1.90272 1.12431 1.96916 1.77817 0.97700 1.09794 1.28894 1.49014 1.02467 1.07634 1.57429 1.22194 1.02143 0.75510 1.04642 0.88390 0.88740 0.88440 0.83769 0.89328 0.89456 0.89625 0.85917 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.25 9.89 71.24 0.70 -0.55 15 2 C 0.10 2.82 6.93 41.17 0.29 3.11 15 3 C -0.30 -11.48 10.68 22.26 0.24 -11.24 15 4 C 0.16 7.66 7.09 42.17 0.30 7.96 15 5 C -0.14 -7.87 7.32 24.77 0.18 -7.69 15 6 O -0.24 -13.62 10.84 -17.94 -0.19 -13.81 15 7 C 0.31 18.79 7.70 84.76 0.65 19.45 15 8 C -0.43 -23.27 9.43 23.03 0.22 -23.05 15 9 H 0.12 5.70 7.85 -2.91 -0.02 5.67 15 10 C 0.03 1.27 5.50 85.37 0.47 1.74 15 11 N -0.75 -40.37 11.85 21.89 0.26 -40.11 15 12 Si 1.02 35.46 29.56 68.60 2.03 37.49 15 13 H -0.25 -8.19 7.11 99.48 0.71 -7.48 15 14 H -0.26 -8.63 7.11 99.48 0.71 -7.93 15 15 H -0.25 -8.20 7.11 99.48 0.71 -7.50 15 16 N -0.56 -34.49 9.35 -298.47 -2.79 -37.28 15 17 C 0.11 6.31 7.82 84.76 0.66 6.97 15 18 Cl -0.01 -0.33 28.26 -2.72 -0.08 -0.41 15 19 N -0.32 -13.56 11.61 -48.52 -0.56 -14.13 15 20 N -0.38 -11.85 4.03 -355.75 -1.43 -13.29 15 21 C 0.09 1.68 11.09 127.77 1.42 3.10 15 22 H 0.10 1.17 8.14 -2.39 -0.02 1.15 15 23 H 0.09 1.30 8.14 -2.39 -0.02 1.28 15 24 H 0.10 0.94 7.72 -2.39 -0.02 0.92 15 25 H 0.14 5.36 8.06 -2.91 -0.02 5.33 15 26 H 0.30 14.03 8.29 -92.71 -0.77 13.26 15 27 H 0.09 1.28 8.14 -2.39 -0.02 1.26 15 28 H 0.08 1.57 8.14 -2.39 -0.02 1.55 15 29 H 0.12 1.18 7.66 -2.39 -0.02 1.16 15 Total: -1.00 -76.61 282.41 3.55 -73.06 By element: Atomic # 1 Polarization: 7.50 SS G_CDS: 1.19 Total: 8.69 kcal Atomic # 6 Polarization: -5.34 SS G_CDS: 5.13 Total: -0.22 kcal Atomic # 7 Polarization: -100.28 SS G_CDS: -4.53 Total: -104.81 kcal Atomic # 8 Polarization: -13.62 SS G_CDS: -0.19 Total: -13.81 kcal Atomic # 14 Polarization: 35.46 SS G_CDS: 2.03 Total: 37.49 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -76.61 3.55 -73.06 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260357677.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.697 kcal (2) G-P(sol) polarization free energy of solvation -76.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.546 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -73.064 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds