Wall clock time and date at job start Mon Mar 30 2020 04:27:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.38446 * 120.07394 * 63.67973 * 3 2 1 5 5 C 1.40887 * 119.91890 * 179.69985 * 4 3 2 6 6 C 1.41081 * 119.96462 * 180.32230 * 5 4 3 7 7 H 1.08002 * 119.99856 * 204.98209 * 6 5 4 8 8 C 1.40310 * 119.99856 * 24.97411 * 6 5 4 9 9 N 1.30589 * 120.00235 * 17.77655 * 8 6 5 10 10 Si 1.86803 * 119.99693 * 197.77111 * 8 6 5 11 11 H 1.48498 * 109.47167 * 0.02562 * 10 8 6 12 12 H 1.48498 * 109.46719 * 120.00645 * 10 8 6 13 13 H 1.48508 * 109.46897 * 240.00010 * 10 8 6 14 14 C 1.40729 * 120.06709 * 0.59428 * 5 4 3 15 15 C 1.38036 * 120.15426 * 359.67932 * 14 5 4 16 16 O 1.35648 * 119.96317 * 180.02562 * 15 14 5 17 17 C 1.42895 * 116.99793 * 359.97438 * 16 15 14 18 18 F 1.39900 * 109.47188 * 299.99510 * 17 16 15 19 19 F 1.39897 * 109.47457 * 59.99867 * 17 16 15 20 20 C 1.40611 * 120.07561 * 0.02562 * 15 14 5 21 21 C 1.46420 * 120.03721 * 179.97438 * 20 15 14 22 22 O 1.21355 * 120.00229 * 180.02562 * 21 20 15 23 23 H 1.07997 * 120.04395 * 359.97438 * 4 3 2 24 24 H 0.96999 * 120.00034 * 179.97438 * 9 8 6 25 25 H 1.08006 * 119.92007 * 179.70796 * 14 5 4 26 26 H 1.09011 * 109.47036 * 179.97438 * 17 16 15 27 27 H 1.08004 * 119.99937 * 0.02562 * 21 20 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2620 -0.5303 -1.0739 5 6 4.6709 -0.5222 -1.0733 6 6 5.3790 -1.0568 -2.1702 7 1 6.3853 -1.4252 -2.0355 8 6 4.7759 -1.1100 -3.4359 9 7 3.7284 -0.3734 -3.6916 10 14 5.4717 -2.2345 -4.7554 11 1 6.6515 -2.9581 -4.2174 12 1 4.4352 -3.2151 -5.1668 13 1 5.8809 -1.4243 -5.9308 14 6 5.3725 0.0133 0.0228 15 6 4.6835 0.5383 1.0976 16 8 5.3636 1.0540 2.1518 17 6 6.7905 1.0202 2.0824 18 9 7.2207 -0.3063 1.9702 19 9 7.2205 1.7460 0.9664 20 6 3.2774 0.5391 1.1008 21 6 2.5474 1.0956 2.2415 22 8 1.3338 1.0956 2.2439 23 1 2.7242 -0.9461 -1.9130 24 1 3.3117 -0.4099 -4.5668 25 1 6.4525 0.0140 0.0228 26 1 7.2088 1.4629 2.9865 27 1 3.0890 1.5062 3.0809 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575638657.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:27:57 Heat of formation + Delta-G solvation = -138.370069 kcal Electronic energy + Delta-G solvation = -19626.133059 eV Core-core repulsion = 15984.842403 eV Total energy + Delta-G solvation = -3641.290655 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 267.049 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.99138 -46.98825 -39.39576 -37.86414 -36.79509 -35.35584 -33.90677 -30.75162 -29.61484 -26.71155 -25.68376 -23.49738 -22.08387 -20.54556 -19.40540 -17.91752 -17.55949 -17.07320 -16.66089 -15.58868 -15.33918 -15.26585 -14.34861 -14.22466 -13.68487 -13.58657 -13.46827 -13.34648 -12.99816 -12.81088 -12.54062 -12.41200 -12.21073 -12.03681 -11.81799 -11.50401 -11.31115 -11.10479 -10.58987 -10.42879 -10.22595 -9.60459 -8.75616 -8.04741 -7.62471 -7.36870 -4.97596 1.49323 2.24444 2.70677 2.81533 2.87747 2.93674 3.39074 3.53623 3.69985 3.85040 3.86797 4.40501 4.59018 4.90940 4.99298 5.20608 5.24978 5.90984 5.97579 6.35556 6.40382 6.57810 6.64884 6.94067 7.17432 7.31976 7.49073 7.61671 7.95237 8.21068 8.26597 8.40660 8.51634 9.53212 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.013995 B = 0.008973 C = 0.005742 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2000.173192 B = 3119.757681 C = 4875.511696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.448 5.448 2 C 0.282 3.718 3 C 0.056 3.944 4 C -0.126 4.126 5 C 0.143 3.857 6 C -0.409 4.409 7 H 0.096 0.904 8 C 0.068 3.932 9 N -0.751 5.751 10 Si 0.921 3.079 11 H -0.253 1.253 12 H -0.265 1.265 13 H -0.268 1.268 14 C -0.296 4.296 15 C 0.188 3.812 16 O -0.329 6.329 17 C 0.414 3.586 18 F -0.200 7.200 19 F -0.198 7.198 20 C -0.310 4.310 21 C 0.383 3.617 22 O -0.504 6.504 23 H 0.134 0.866 24 H 0.296 0.704 25 H 0.120 0.880 26 H 0.172 0.828 27 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.632 0.413 4.041 10.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.125 5.125 2 C -0.032 4.032 3 C 0.052 3.948 4 C -0.148 4.148 5 C 0.139 3.861 6 C -0.435 4.435 7 H 0.114 0.886 8 C -0.156 4.156 9 N -0.373 5.373 10 Si 0.744 3.256 11 H -0.176 1.176 12 H -0.190 1.190 13 H -0.192 1.192 14 C -0.317 4.317 15 C 0.144 3.856 16 O -0.246 6.246 17 C 0.324 3.676 18 F -0.182 7.182 19 F -0.180 7.180 20 C -0.314 4.314 21 C 0.249 3.751 22 O -0.384 6.384 23 H 0.151 0.849 24 H 0.107 0.893 25 H 0.138 0.862 26 H 0.189 0.811 27 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 7.034 0.571 4.005 8.114 hybrid contribution 1.191 -0.418 -0.885 1.542 sum 8.225 0.153 3.120 8.798 Atomic orbital electron populations 1.80958 1.12494 1.09126 1.09956 1.25584 0.92731 0.93046 0.91794 1.15550 0.83474 1.00674 0.95095 1.21460 0.94328 1.02409 0.96633 1.17340 0.90991 0.86543 0.91238 1.20058 1.01436 1.30237 0.91800 0.88560 1.26286 0.94077 0.94468 1.00795 1.69675 1.15866 1.27595 1.24138 0.86011 0.80474 0.80017 0.79144 1.17634 1.18970 1.19244 1.21315 0.99145 1.13494 0.97725 1.18484 0.89950 0.92156 0.84971 1.86401 1.17756 1.77680 1.42777 1.23164 0.79850 0.75989 0.88620 1.93090 1.89648 1.38608 1.96806 1.93101 1.89630 1.77578 1.57704 1.18978 0.89496 1.22387 1.00575 1.23257 0.88819 0.74857 0.88165 1.90495 1.17335 1.49781 1.80779 0.84883 0.89266 0.86246 0.81144 0.89988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -11.08 18.40 41.84 0.77 -10.31 15 2 C 0.28 6.77 12.72 -22.47 -0.29 6.49 15 3 C 0.06 1.29 5.75 -106.62 -0.61 0.68 15 4 C -0.13 -2.92 8.35 -38.50 -0.32 -3.24 15 5 C 0.14 3.26 5.57 -106.88 -0.60 2.67 15 6 C -0.41 -9.03 9.04 -37.73 -0.34 -9.37 15 7 H 0.10 2.00 7.91 -52.49 -0.42 1.59 15 8 C 0.07 1.43 5.13 -17.30 -0.09 1.34 15 9 N -0.75 -16.53 10.96 55.57 0.61 -15.92 15 10 Si 0.92 15.57 29.60 -169.99 -5.03 10.54 15 11 H -0.25 -4.22 7.11 56.52 0.40 -3.82 15 12 H -0.27 -4.48 7.11 56.52 0.40 -4.08 15 13 H -0.27 -4.49 7.11 56.52 0.40 -4.09 15 14 C -0.30 -6.25 7.97 -38.72 -0.31 -6.56 15 15 C 0.19 3.75 6.49 -38.76 -0.25 3.50 15 16 O -0.33 -5.29 9.57 -18.64 -0.18 -5.46 15 17 C 0.41 5.24 5.97 101.05 0.60 5.85 15 18 F -0.20 -2.90 15.57 2.25 0.04 -2.86 15 19 F -0.20 -2.96 15.57 2.25 0.04 -2.92 15 20 C -0.31 -6.64 5.92 -104.43 -0.62 -7.26 15 21 C 0.38 7.72 11.14 34.02 0.38 8.10 15 22 O -0.50 -11.87 15.10 5.49 0.08 -11.79 15 23 H 0.13 3.15 6.16 -52.49 -0.32 2.82 15 24 H 0.30 5.83 8.29 -40.82 -0.34 5.49 15 25 H 0.12 2.40 5.05 -52.48 -0.26 2.13 15 26 H 0.17 1.13 8.14 -51.92 -0.42 0.71 15 27 H 0.08 1.36 7.61 -52.48 -0.40 0.96 15 LS Contribution 263.30 15.07 3.97 3.97 Total: -1.00 -27.74 263.30 -3.11 -30.85 By element: Atomic # 1 Polarization: 2.67 SS G_CDS: -0.96 Total: 1.71 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: -2.44 Total: 2.19 kcal Atomic # 7 Polarization: -27.60 SS G_CDS: 1.38 Total: -26.22 kcal Atomic # 8 Polarization: -17.15 SS G_CDS: -0.10 Total: -17.25 kcal Atomic # 9 Polarization: -5.86 SS G_CDS: 0.07 Total: -5.79 kcal Atomic # 14 Polarization: 15.57 SS G_CDS: -5.03 Total: 10.54 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -27.74 -3.11 -30.85 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575638657.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.521 kcal (2) G-P(sol) polarization free energy of solvation -27.739 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.849 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.370 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds