Wall clock time and date at job start Mon Mar 30 2020 04:28:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.39400 * 119.93225 * 96.34810 * 3 2 1 5 5 C 1.38248 * 120.21513 * 179.97438 * 4 3 2 6 6 O 1.35491 * 119.96007 * 180.02562 * 5 4 3 7 7 C 1.42901 * 116.99826 * 359.97329 * 6 5 4 8 8 F 1.39899 * 109.47535 * 300.00071 * 7 6 5 9 9 F 1.39907 * 109.47287 * 60.00287 * 7 6 5 10 10 C 1.41618 * 120.08141 * 359.97438 * 5 4 3 11 11 C 1.40850 * 120.06990 * 180.02562 * 10 5 4 12 12 H 1.07994 * 119.99706 * 25.03393 * 11 10 5 13 13 C 1.40182 * 120.00104 * 205.03944 * 11 10 5 14 14 N 1.30703 * 120.00256 * 17.77640 * 13 11 10 15 15 Si 1.86798 * 119.99843 * 197.77736 * 13 11 10 16 16 H 1.48507 * 109.47330 * 60.00007 * 15 13 11 17 17 H 1.48504 * 109.47377 * 179.97438 * 15 13 11 18 18 H 1.48495 * 109.47335 * 299.99801 * 15 13 11 19 19 C 1.40596 * 119.86706 * 0.02562 * 10 5 4 20 20 C 1.38887 * 119.78105 * 0.25659 * 19 10 5 21 21 C 1.46928 * 120.03918 * 179.71765 * 20 19 10 22 22 O 1.21287 * 119.99951 * 359.97438 * 21 20 19 23 23 H 1.07995 * 119.88871 * 359.97186 * 4 3 2 24 24 H 1.09007 * 109.47346 * 179.97438 * 7 6 5 25 25 H 0.97003 * 120.00272 * 180.02562 * 14 13 11 26 26 H 1.07995 * 120.11184 * 179.97438 * 19 10 5 27 27 H 1.07999 * 120.00361 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2635 0.1345 -1.2007 5 6 4.6460 0.1364 -1.2074 6 8 5.3167 0.2674 -2.3773 7 6 4.5316 0.3985 -3.5641 8 9 3.7257 -0.7347 -3.7177 9 9 3.7229 1.5358 -3.4651 10 6 5.3619 0.0027 0.0072 11 6 6.7704 0.0052 0.0001 12 1 7.3054 0.4929 -0.8013 13 6 7.4776 -0.6253 1.0332 14 7 6.8764 -1.4965 1.7999 15 14 9.2794 -0.2204 1.3141 16 1 9.4206 1.2272 1.6142 17 1 9.7928 -1.0150 2.4588 18 1 10.0573 -0.5509 0.0931 19 6 4.6639 -0.1325 1.2201 20 6 3.2750 -0.1396 1.2197 21 6 2.5399 -0.2869 2.4833 22 8 3.1459 -0.4028 3.5275 23 1 2.7206 0.2370 -2.1286 24 1 5.1906 0.4957 -4.4269 25 1 7.3657 -1.9326 2.5150 26 1 5.2059 -0.2351 2.1486 27 1 1.4599 -0.2919 2.4824 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575640959.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:28:11 Heat of formation + Delta-G solvation = -136.604736 kcal Electronic energy + Delta-G solvation = -19613.109219 eV Core-core repulsion = 15971.895114 eV Total energy + Delta-G solvation = -3641.214105 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 267.049 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -48.89207 -46.88859 -39.23326 -38.15904 -36.53392 -35.58383 -34.03807 -30.64405 -29.73831 -26.38132 -25.81838 -23.57279 -22.35165 -20.19052 -18.95612 -17.97650 -17.57309 -17.42798 -16.70353 -15.71281 -15.63378 -14.79838 -14.21996 -14.04381 -13.81057 -13.65678 -13.30739 -13.14188 -13.11656 -12.86551 -12.74591 -12.53938 -12.46027 -11.98970 -11.81196 -11.46165 -11.31677 -10.98795 -10.64510 -10.49342 -10.16611 -9.58505 -9.07790 -8.01660 -7.71184 -7.27006 -4.78335 1.38051 2.14747 2.79681 2.86937 2.89527 3.24389 3.29209 3.43436 3.59477 3.71415 3.95720 4.37839 4.72884 4.89775 4.95862 4.99401 5.21497 5.65011 5.93343 6.12825 6.48252 6.62771 6.78340 6.92350 6.99357 7.26415 7.53806 7.72097 8.03245 8.08953 8.21510 8.28031 8.38885 9.62877 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.014085 B = 0.009271 C = 0.005880 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1987.414427 B = 3019.561448 C = 4760.914312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.486 5.486 2 C 0.282 3.718 3 C -0.129 4.129 4 C -0.100 4.100 5 C -0.009 4.009 6 O -0.305 6.305 7 C 0.405 3.595 8 F -0.207 7.207 9 F -0.208 7.208 10 C 0.110 3.890 11 C -0.406 4.406 12 H 0.097 0.903 13 C 0.066 3.934 14 N -0.755 5.755 15 Si 0.923 3.077 16 H -0.257 1.257 17 H -0.273 1.273 18 H -0.260 1.260 19 C -0.078 4.078 20 C -0.138 4.138 21 C 0.382 3.618 22 O -0.468 6.468 23 H 0.116 0.884 24 H 0.168 0.832 25 H 0.296 0.704 26 H 0.148 0.852 27 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.998 2.113 -6.007 7.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.165 5.165 2 C -0.028 4.028 3 C -0.135 4.135 4 C -0.121 4.121 5 C -0.052 4.052 6 O -0.222 6.222 7 C 0.314 3.686 8 F -0.189 7.189 9 F -0.190 7.190 10 C 0.106 3.894 11 C -0.432 4.432 12 H 0.115 0.885 13 C -0.157 4.157 14 N -0.377 5.377 15 Si 0.746 3.254 16 H -0.181 1.181 17 H -0.198 1.198 18 H -0.184 1.184 19 C -0.098 4.098 20 C -0.141 4.141 21 C 0.242 3.758 22 O -0.342 6.342 23 H 0.134 0.866 24 H 0.185 0.815 25 H 0.108 0.892 26 H 0.165 0.835 27 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.756 1.863 -5.259 5.849 hybrid contribution 0.706 0.029 -0.212 0.737 sum 2.462 1.891 -5.471 6.291 Atomic orbital electron populations 1.81118 1.12313 1.14240 1.08826 1.25896 0.92747 0.91768 0.92426 1.14990 0.82927 1.22089 0.93536 1.20752 0.92382 1.02027 0.96961 1.18732 0.89444 1.12718 0.84301 1.86458 1.34213 1.88466 1.13079 1.23248 0.81783 0.71943 0.91638 1.93063 1.76596 1.53325 1.95897 1.93060 1.76520 1.52708 1.96725 1.17073 0.93598 0.91166 0.87561 1.19791 0.90972 1.26217 1.06235 0.88456 1.26225 1.02570 0.92821 0.94134 1.69689 1.39741 1.15156 1.13071 0.86083 0.79831 0.80293 0.79233 1.18146 1.19773 1.18372 1.21526 0.90751 0.99008 0.98471 1.20267 0.94914 1.06146 0.92801 1.23884 0.94152 0.70410 0.87319 1.90465 1.73518 1.35595 1.34624 0.86575 0.81548 0.89225 0.83508 0.90170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -10.06 18.54 41.84 0.78 -9.29 15 2 C 0.28 5.69 13.89 -22.47 -0.31 5.38 15 3 C -0.13 -2.67 5.79 -106.23 -0.61 -3.29 15 4 C -0.10 -2.05 7.91 -39.15 -0.31 -2.36 15 5 C -0.01 -0.18 6.52 -38.29 -0.25 -0.43 15 6 O -0.30 -5.71 9.67 -18.16 -0.18 -5.89 15 7 C 0.41 5.84 5.98 101.05 0.60 6.44 15 8 F -0.21 -3.32 15.57 2.25 0.04 -3.28 15 9 F -0.21 -3.26 15.57 2.25 0.04 -3.22 15 10 C 0.11 2.54 5.58 -106.73 -0.60 1.94 15 11 C -0.41 -9.08 8.69 -37.86 -0.33 -9.41 15 12 H 0.10 2.07 7.63 -52.49 -0.40 1.67 15 13 C 0.07 1.41 5.13 -17.30 -0.09 1.32 15 14 N -0.75 -16.93 10.97 55.56 0.61 -16.32 15 15 Si 0.92 15.92 29.60 -169.99 -5.03 10.89 15 16 H -0.26 -4.43 7.11 56.52 0.40 -4.03 15 17 H -0.27 -4.65 7.11 56.52 0.40 -4.24 15 18 H -0.26 -4.41 7.11 56.52 0.40 -4.00 15 19 C -0.08 -1.79 8.21 -38.45 -0.32 -2.11 15 20 C -0.14 -2.94 5.89 -104.83 -0.62 -3.56 15 21 C 0.38 7.61 10.99 34.25 0.38 7.99 15 22 O -0.47 -10.40 17.14 5.55 0.10 -10.31 15 23 H 0.12 2.26 5.04 -52.49 -0.26 1.99 15 24 H 0.17 1.47 8.14 -51.92 -0.42 1.05 15 25 H 0.30 6.03 8.29 -40.82 -0.34 5.69 15 26 H 0.15 3.56 5.73 -52.49 -0.30 3.26 15 27 H 0.08 1.42 7.18 -52.49 -0.38 1.04 15 LS Contribution 264.96 15.07 3.99 3.99 Total: -1.00 -26.07 264.96 -3.01 -29.08 By element: Atomic # 1 Polarization: 3.33 SS G_CDS: -0.90 Total: 2.43 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: -2.45 Total: 1.92 kcal Atomic # 7 Polarization: -26.99 SS G_CDS: 1.38 Total: -25.61 kcal Atomic # 8 Polarization: -16.12 SS G_CDS: -0.08 Total: -16.20 kcal Atomic # 9 Polarization: -6.58 SS G_CDS: 0.07 Total: -6.51 kcal Atomic # 14 Polarization: 15.92 SS G_CDS: -5.03 Total: 10.89 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -26.07 -3.01 -29.08 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575640959.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.522 kcal (2) G-P(sol) polarization free energy of solvation -26.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds