Wall clock time and date at job start Mon Mar 30 2020 04:28:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43206 * 179.97438 * 2 1 4 4 C 1.38742 * 119.58060 * 152.73264 * 3 2 1 5 5 C 1.40673 * 119.80629 * 180.24804 * 4 3 2 6 6 C 1.40535 * 120.47300 * 179.74833 * 5 4 3 7 7 H 1.08001 * 119.99992 * 205.37671 * 6 5 4 8 8 C 1.40385 * 119.99934 * 25.37555 * 6 5 4 9 9 N 1.30587 * 119.99612 * 15.16683 * 8 6 5 10 10 Si 1.86792 * 119.99956 * 195.16496 * 8 6 5 11 11 H 1.48511 * 109.47131 * 90.00218 * 10 8 6 12 12 H 1.48499 * 109.47526 * 210.00098 * 10 8 6 13 13 H 1.48499 * 109.47628 * 330.00366 * 10 8 6 14 14 C 1.46758 * 119.05864 * 359.76987 * 5 4 3 15 15 C 1.46653 * 120.40632 * 179.97438 * 14 5 4 16 16 O 1.21337 * 119.99878 * 180.02562 * 15 14 5 17 17 C 1.39423 * 119.18923 * 359.97438 * 14 5 4 18 18 C 1.38670 * 120.12758 * 359.97438 * 17 14 5 19 19 O 1.35534 * 119.50755 * 180.02562 * 18 17 14 20 20 C 1.42905 * 117.00000 * 359.97438 * 19 18 17 21 21 F 1.39902 * 109.46703 * 60.00156 * 20 19 18 22 22 F 1.39900 * 109.47189 * 300.00676 * 20 19 18 23 23 H 1.08001 * 120.10025 * 0.04665 * 4 3 2 24 24 H 0.97000 * 119.99704 * 179.97438 * 9 8 6 25 25 H 1.07998 * 120.00122 * 0.02562 * 15 14 5 26 26 H 1.07999 * 119.93684 * 180.02562 * 17 14 5 27 27 H 1.08995 * 109.47145 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2524 1.0735 -0.5528 5 6 4.6591 1.0766 -0.5600 6 6 5.3666 2.1536 -1.1210 7 1 6.3672 2.0041 -1.4990 8 6 4.7726 3.4237 -1.1901 9 7 3.7058 3.6848 -0.4837 10 14 5.5083 4.7401 -2.2923 11 1 4.8961 4.6540 -3.6427 12 1 5.2388 6.0798 -1.7112 13 1 6.9748 4.5331 -2.3997 14 6 5.3775 -0.0610 0.0262 15 6 6.8438 -0.0886 0.0340 16 8 7.4302 -1.0331 0.5201 17 6 4.6490 -1.1152 0.5755 18 6 3.2627 -1.0829 0.5655 19 8 2.5670 -2.1142 1.1035 20 6 3.3268 -3.1905 1.6571 21 9 4.1386 -2.7061 2.6884 22 9 4.1280 -3.7570 0.6599 23 1 2.7069 1.9023 -0.9792 24 1 3.2955 4.5625 -0.5311 25 1 7.4016 0.7317 -0.3930 26 1 5.1653 -1.9582 1.0104 27 1 2.6496 -3.9476 2.0524 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575641718.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:28:03 Heat of formation + Delta-G solvation = -137.718851 kcal Electronic energy + Delta-G solvation = -19588.024779 eV Core-core repulsion = 15946.762362 eV Total energy + Delta-G solvation = -3641.262416 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 267.049 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.90479 -46.89645 -39.14746 -37.80798 -36.59310 -35.64471 -33.90227 -30.72776 -29.81912 -26.51610 -25.18456 -24.33940 -21.52009 -20.44985 -19.08300 -18.36886 -17.45185 -17.26339 -16.54025 -15.73674 -15.45899 -14.93763 -14.12636 -14.01916 -13.71415 -13.56567 -13.30850 -13.25365 -13.08361 -13.03343 -12.63865 -12.51127 -12.13590 -12.03564 -11.96216 -11.59882 -11.45333 -11.07869 -10.60599 -10.49371 -10.18360 -9.65522 -8.70416 -8.08070 -7.70592 -7.37238 -4.90680 1.31071 2.36334 2.77840 2.81378 2.84730 3.13408 3.18559 3.36633 3.52112 3.90688 3.93753 4.20870 4.69230 4.70252 4.98551 5.16206 5.39254 5.79611 6.08410 6.24948 6.44440 6.53945 6.64417 6.80040 7.16602 7.25458 7.42195 7.66806 7.85289 8.10861 8.20004 8.23404 8.55950 9.51883 Molecular weight = 267.05amu Principal moments of inertia in cm(-1) A = 0.019940 B = 0.007317 C = 0.005611 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1403.873640 B = 3825.823691 C = 4989.307796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.457 5.457 2 C 0.282 3.718 3 C 0.005 3.995 4 C -0.090 4.090 5 C 0.128 3.872 6 C -0.416 4.416 7 H 0.099 0.901 8 C 0.070 3.930 9 N -0.759 5.759 10 Si 0.923 3.077 11 H -0.261 1.261 12 H -0.272 1.272 13 H -0.254 1.254 14 C -0.280 4.280 15 C 0.390 3.610 16 O -0.515 6.515 17 C -0.076 4.076 18 C -0.018 4.018 19 O -0.327 6.327 20 C 0.412 3.588 21 F -0.203 7.203 22 F -0.203 7.203 23 H 0.144 0.856 24 H 0.296 0.704 25 H 0.089 0.911 26 H 0.126 0.874 27 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.039 -2.717 -0.135 2.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.134 5.134 2 C -0.032 4.032 3 C 0.000 4.000 4 C -0.112 4.112 5 C 0.124 3.876 6 C -0.443 4.443 7 H 0.117 0.883 8 C -0.154 4.154 9 N -0.382 5.382 10 Si 0.746 3.254 11 H -0.186 1.186 12 H -0.197 1.197 13 H -0.178 1.178 14 C -0.283 4.283 15 C 0.256 3.744 16 O -0.396 6.396 17 C -0.095 4.095 18 C -0.062 4.062 19 O -0.246 6.246 20 C 0.321 3.679 21 F -0.185 7.185 22 F -0.185 7.185 23 H 0.162 0.838 24 H 0.108 0.892 25 H 0.105 0.895 26 H 0.144 0.856 27 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -0.744 -3.018 0.198 3.115 hybrid contribution 0.810 0.661 -0.317 1.092 sum 0.066 -2.357 -0.120 2.361 Atomic orbital electron populations 1.81051 1.12376 1.09615 1.10360 1.25875 0.92885 0.92015 0.92392 1.15271 0.83253 0.95690 1.05751 1.21466 0.94391 0.95298 1.00004 1.18509 0.90758 0.90732 0.87610 1.19844 1.02106 0.92058 1.30250 0.88349 1.26266 0.94221 1.00661 0.94274 1.69620 1.16017 1.24191 1.28328 0.86018 0.80925 0.78377 0.80117 1.18558 1.19677 1.17769 1.21228 0.94925 0.99603 1.12570 1.23470 0.89063 0.87305 0.74521 1.90413 1.72924 1.36836 1.39386 1.21162 0.90872 0.99058 0.98373 1.17889 0.89909 0.89591 1.08819 1.86372 1.35380 1.29012 1.73793 1.23104 0.82240 0.86621 0.75949 1.93082 1.76208 1.89361 1.59812 1.93076 1.76787 1.85139 1.63521 0.83849 0.89222 0.89464 0.85618 0.81543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -9.86 18.54 41.84 0.78 -9.09 15 2 C 0.28 5.99 14.76 -22.47 -0.33 5.66 15 3 C 0.00 0.10 5.73 -106.90 -0.61 -0.51 15 4 C -0.09 -1.96 8.36 -38.48 -0.32 -2.28 15 5 C 0.13 2.81 5.73 -104.67 -0.60 2.21 15 6 C -0.42 -8.61 8.51 -37.91 -0.32 -8.93 15 7 H 0.10 1.86 6.64 -52.49 -0.35 1.51 15 8 C 0.07 1.38 5.20 -17.27 -0.09 1.29 15 9 N -0.76 -15.82 10.86 55.57 0.60 -15.22 15 10 Si 0.92 14.87 29.59 -169.99 -5.03 9.84 15 11 H -0.26 -4.22 7.11 56.52 0.40 -3.82 15 12 H -0.27 -4.39 7.11 56.52 0.40 -3.99 15 13 H -0.25 -4.04 7.11 56.52 0.40 -3.63 15 14 C -0.28 -6.12 6.06 -102.62 -0.62 -6.75 15 15 C 0.39 8.04 11.03 34.13 0.38 8.42 15 16 O -0.52 -11.81 17.17 5.51 0.09 -11.72 15 17 C -0.08 -1.65 7.76 -38.98 -0.30 -1.95 15 18 C -0.02 -0.38 6.49 -38.54 -0.25 -0.63 15 19 O -0.33 -6.16 9.78 -18.30 -0.18 -6.34 15 20 C 0.41 6.23 5.98 101.05 0.60 6.83 15 21 F -0.20 -3.45 15.54 2.25 0.03 -3.41 15 22 F -0.20 -3.40 15.54 2.25 0.04 -3.37 15 23 H 0.14 3.15 6.13 -52.49 -0.32 2.83 15 24 H 0.30 5.56 8.29 -40.82 -0.34 5.22 15 25 H 0.09 1.56 6.65 -52.49 -0.35 1.21 15 26 H 0.13 2.74 4.57 -52.49 -0.24 2.50 15 27 H 0.17 1.57 8.14 -51.93 -0.42 1.14 15 LS Contribution 264.36 15.07 3.98 3.98 Total: -1.00 -26.01 264.36 -2.97 -28.98 By element: Atomic # 1 Polarization: 3.80 SS G_CDS: -0.82 Total: 2.98 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: -2.47 Total: 3.36 kcal Atomic # 7 Polarization: -25.69 SS G_CDS: 1.38 Total: -24.31 kcal Atomic # 8 Polarization: -17.97 SS G_CDS: -0.08 Total: -18.06 kcal Atomic # 9 Polarization: -6.85 SS G_CDS: 0.07 Total: -6.78 kcal Atomic # 14 Polarization: 14.87 SS G_CDS: -5.03 Total: 9.84 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -26.01 -2.97 -28.98 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575641718.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.737 kcal (2) G-P(sol) polarization free energy of solvation -26.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds