Wall clock time and date at job start Mon Mar 30 2020 04:28:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 C 1.46497 * 119.99747 * 2 1 4 4 C 1.50700 * 109.47410 * 269.99753 * 3 2 1 5 5 H 1.08003 * 119.99742 * 0.02562 * 4 3 2 6 6 C 1.37868 * 120.00144 * 180.02562 * 4 3 2 7 7 N 1.31516 * 120.00284 * 0.02562 * 6 4 3 8 8 Si 1.86802 * 120.00265 * 180.02562 * 6 4 3 9 9 H 1.48500 * 109.47281 * 89.99536 * 8 6 4 10 10 H 1.48500 * 109.47426 * 209.99989 * 8 6 4 11 11 H 1.48503 * 109.47056 * 330.00226 * 8 6 4 12 12 C 1.34773 * 119.99816 * 180.02562 * 2 1 3 13 13 O 1.21604 * 119.99816 * 183.99937 * 12 2 1 14 14 C 1.47432 * 120.00563 * 3.99715 * 12 2 1 15 15 C 1.39749 * 120.20110 * 307.55575 * 14 12 2 16 16 C 1.37844 * 119.91457 * 179.97438 * 15 14 12 17 17 Cl 1.73604 * 119.83743 * 180.02562 * 16 15 14 18 18 C 1.38701 * 120.32518 * 359.74572 * 16 15 14 19 19 C 1.37955 * 120.40968 * 0.51326 * 18 16 15 20 20 C 1.38944 * 120.07879 * 359.48719 * 19 18 16 21 21 N 1.38938 * 120.16439 * 180.23494 * 20 19 18 22 22 H 1.09000 * 109.47025 * 264.54875 * 1 2 3 23 23 H 1.08997 * 109.46987 * 24.55240 * 1 2 3 24 24 H 1.09005 * 109.46980 * 144.55048 * 1 2 3 25 25 H 1.09001 * 109.47541 * 30.00383 * 3 2 1 26 26 H 1.09005 * 109.46554 * 150.00098 * 3 2 1 27 27 H 0.96999 * 120.00112 * 180.02562 * 7 6 4 28 28 H 1.08005 * 120.04237 * 359.95765 * 15 14 12 29 29 H 1.08001 * 119.79729 * 180.25530 * 18 16 15 30 30 H 1.07999 * 119.96251 * 179.76374 * 19 18 16 31 31 H 0.96997 * 119.99689 * 354.82929 * 21 20 19 32 32 H 0.96999 * 120.00256 * 174.83863 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7038 -1.4208 5 1 2.0975 1.0962 -2.2417 6 6 3.1269 2.8774 -1.6727 7 7 3.5550 3.6171 -0.6731 8 14 3.4377 3.4171 -3.4338 9 1 2.3079 4.2607 -3.8998 10 1 4.6984 4.1995 -3.4967 11 1 3.5539 2.2202 -4.3051 12 6 2.1389 -1.1672 -0.0005 13 8 3.3527 -1.1685 0.0729 14 6 1.4045 -2.4424 -0.0901 15 6 0.3597 -2.7158 0.7969 16 6 -0.3233 -3.9098 0.7075 17 17 -1.6213 -4.2470 1.8099 18 6 0.0176 -4.8407 -0.2626 19 6 1.0501 -4.5870 -1.1416 20 6 1.7499 -3.3890 -1.0668 21 7 2.7869 -3.1295 -1.9543 22 1 -0.3633 -0.0976 1.0230 23 1 -0.3633 0.9347 -0.4270 24 1 -0.3633 -0.8372 -0.5961 25 1 1.6085 2.0284 0.5139 26 1 3.1500 1.1383 0.5139 27 1 4.0318 4.4430 -0.8503 28 1 0.0880 -1.9926 1.5516 29 1 -0.5259 -5.7717 -0.3276 30 1 1.3120 -5.3185 -1.8918 31 1 3.0736 -3.8143 -2.5787 32 1 3.2244 -2.2638 -1.9494 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000019833354.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:28:10 Heat of formation + Delta-G solvation = -18.351732 kcal Electronic energy + Delta-G solvation = -18035.284505 eV Core-core repulsion = 15021.402100 eV Total energy + Delta-G solvation = -3013.882406 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.072 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.07613 -38.02643 -36.44266 -35.03054 -34.08823 -32.72158 -31.16729 -28.54557 -27.69776 -25.92467 -24.00031 -22.65140 -21.79017 -19.08414 -17.16685 -17.02148 -16.68981 -16.52303 -15.52995 -15.04881 -14.49353 -14.35302 -14.05516 -13.82286 -13.42900 -12.89750 -12.55779 -12.21364 -12.09607 -12.03669 -11.83578 -11.44322 -11.24265 -10.95093 -10.88242 -10.62747 -10.21924 -10.16848 -9.69741 -9.15151 -8.88864 -8.48364 -7.71803 -7.45608 -6.09123 -4.14725 1.12497 1.43020 2.26876 3.25002 3.26336 3.33148 3.36430 3.72118 3.93640 4.03781 4.39584 4.75823 4.87144 5.17331 5.25809 5.33690 5.51539 5.72406 5.82669 5.94298 6.03772 6.11819 6.23855 6.28236 6.60836 7.01297 7.39171 7.43495 7.51027 7.82020 7.86748 8.17313 8.34057 8.82221 8.99447 9.50600 10.98852 Molecular weight = 268.07amu Principal moments of inertia in cm(-1) A = 0.028107 B = 0.005090 C = 0.004653 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 995.941651 B = 5500.149492 C = 6016.485119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.591 5.591 3 C 0.243 3.757 4 C -0.529 4.529 5 H 0.057 0.943 6 C 0.062 3.938 7 N -0.893 5.893 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.275 1.275 12 C 0.554 3.446 13 O -0.541 6.541 14 C -0.189 4.189 15 C -0.030 4.030 16 C -0.105 4.105 17 Cl -0.084 7.084 18 C -0.047 4.047 19 C -0.198 4.198 20 C 0.270 3.730 21 N -0.855 5.855 22 H 0.045 0.955 23 H 0.076 0.924 24 H 0.059 0.941 25 H 0.034 0.966 26 H 0.046 0.954 27 H 0.264 0.736 28 H 0.136 0.864 29 H 0.131 0.869 30 H 0.132 0.868 31 H 0.398 0.602 32 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.866 -15.358 0.115 17.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.322 5.322 3 C 0.124 3.876 4 C -0.567 4.567 5 H 0.075 0.925 6 C -0.140 4.140 7 N -0.531 5.531 8 Si 0.726 3.274 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.200 1.200 12 C 0.341 3.659 13 O -0.419 6.419 14 C -0.198 4.198 15 C -0.050 4.050 16 C -0.133 4.133 17 Cl -0.056 7.056 18 C -0.067 4.067 19 C -0.221 4.221 20 C 0.159 3.841 21 N -0.392 5.392 22 H 0.064 0.936 23 H 0.094 0.906 24 H 0.078 0.922 25 H 0.052 0.948 26 H 0.064 0.936 27 H 0.074 0.926 28 H 0.154 0.846 29 H 0.149 0.851 30 H 0.149 0.851 31 H 0.227 0.773 32 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges -8.227 -15.135 0.297 17.229 hybrid contribution 0.232 0.446 -1.108 1.217 sum -7.995 -14.689 -0.811 16.744 Atomic orbital electron populations 1.21768 0.81227 1.03020 1.00277 1.48118 1.06371 1.07545 1.70149 1.19365 0.92738 0.77883 0.97630 1.21402 1.36697 1.06506 0.92144 0.92495 1.24933 0.95309 0.96351 0.97429 1.69931 1.38172 1.14292 1.30742 0.86494 0.77727 0.78602 0.84547 1.20595 1.21059 1.19981 1.17912 0.87056 0.83129 0.77822 1.90761 1.13380 1.87172 1.50632 1.19550 1.01900 0.97519 1.00838 1.20966 0.91827 0.95041 0.97137 1.20355 0.96962 0.97697 0.98307 1.98334 1.48982 1.95348 1.62918 1.20776 0.95509 0.97944 0.92442 1.20443 1.00081 0.97473 1.04152 1.17699 0.86927 0.91875 0.87640 1.42628 1.37331 1.20030 1.39177 0.93607 0.90569 0.92183 0.94771 0.93560 0.92638 0.84607 0.85099 0.85055 0.77348 0.75390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.34 9.13 59.85 0.55 1.89 16 2 N -0.59 -12.59 2.86 -184.23 -0.53 -13.11 16 3 C 0.24 6.28 5.17 -5.20 -0.03 6.25 16 4 C -0.53 -14.65 9.39 -34.44 -0.32 -14.97 16 5 H 0.06 1.57 7.81 -52.48 -0.41 1.16 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -26.14 13.29 55.43 0.74 -25.40 16 8 Si 0.90 21.39 29.54 -169.99 -5.02 16.37 16 9 H -0.28 -6.51 7.11 56.52 0.40 -6.10 16 10 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 11 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 12 C 0.55 11.66 6.50 -12.52 -0.08 11.58 16 13 O -0.54 -13.33 15.40 5.27 0.08 -13.25 16 14 C -0.19 -3.17 4.77 -104.80 -0.50 -3.67 16 15 C -0.03 -0.43 7.68 -39.16 -0.30 -0.73 16 16 C -0.10 -1.32 6.31 -39.55 -0.25 -1.57 16 17 Cl -0.08 -0.97 28.94 -51.86 -1.50 -2.47 16 18 C -0.05 -0.53 9.81 -39.51 -0.39 -0.91 16 19 C -0.20 -2.30 9.88 -39.42 -0.39 -2.69 16 20 C 0.27 3.95 6.75 -83.59 -0.56 3.39 16 21 N -0.86 -11.92 8.90 32.55 0.29 -11.63 16 22 H 0.05 0.65 7.19 -51.93 -0.37 0.28 16 23 H 0.08 1.27 8.03 -51.93 -0.42 0.85 16 24 H 0.06 0.90 6.46 -51.93 -0.34 0.56 16 25 H 0.03 0.89 8.07 -51.93 -0.42 0.47 16 26 H 0.05 1.35 7.37 -51.93 -0.38 0.96 16 27 H 0.26 7.30 8.31 -40.82 -0.34 6.96 16 28 H 0.14 1.87 6.67 -52.48 -0.35 1.52 16 29 H 0.13 1.13 8.06 -52.49 -0.42 0.71 16 30 H 0.13 1.15 8.06 -52.49 -0.42 0.72 16 31 H 0.40 4.07 8.84 -40.82 -0.36 3.71 16 32 H 0.41 6.98 6.92 -40.82 -0.28 6.70 16 LS Contribution 292.85 15.07 4.41 4.41 Total: -1.00 -31.57 292.85 -7.21 -38.78 By element: Atomic # 1 Polarization: 9.40 SS G_CDS: -3.31 Total: 6.09 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -2.37 Total: 0.21 kcal Atomic # 7 Polarization: -50.65 SS G_CDS: 0.50 Total: -50.15 kcal Atomic # 8 Polarization: -13.33 SS G_CDS: 0.08 Total: -13.25 kcal Atomic # 14 Polarization: 21.39 SS G_CDS: -5.02 Total: 16.37 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -1.50 Total: -2.47 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -31.57 -7.21 -38.78 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000019833354.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.429 kcal (2) G-P(sol) polarization free energy of solvation -31.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.140 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds