Wall clock time and date at job start Mon Mar 30 2020 04:40:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08994 * 109.47303 * 2 1 4 4 C 1.50707 * 109.47269 * 120.00276 * 2 1 3 5 5 H 1.07997 * 120.00086 * 119.99845 * 4 2 1 6 6 C 1.37879 * 119.99592 * 299.99908 * 4 2 1 7 7 N 1.31510 * 120.00123 * 359.97438 * 6 4 2 8 8 Si 1.86796 * 119.99770 * 179.97438 * 6 4 2 9 9 H 1.48509 * 109.47161 * 60.00012 * 8 6 4 10 10 H 1.48497 * 109.47456 * 179.97438 * 8 6 4 11 11 H 1.48506 * 109.47316 * 300.00360 * 8 6 4 12 12 N 1.46503 * 109.47245 * 239.99752 * 2 1 3 13 13 N 1.40108 * 119.99543 * 89.99923 * 12 2 1 14 14 C 1.29775 * 119.99839 * 180.02562 * 13 12 2 15 15 C 1.47378 * 120.00013 * 180.02562 * 14 13 12 16 16 C 1.39877 * 120.59199 * 174.55937 * 15 14 13 17 17 C 1.38454 * 118.38059 * 179.80428 * 16 15 14 18 18 C 1.38380 * 119.47219 * 0.47611 * 17 16 15 19 19 Cl 1.73606 * 119.41724 * 179.74597 * 18 17 16 20 20 N 1.32079 * 121.16963 * 359.76343 * 18 17 16 21 21 C 1.32286 * 121.76438 * 359.97438 * 20 18 17 22 22 N 1.38772 * 119.80642 * 179.97438 * 21 20 18 23 23 H 1.09004 * 109.47291 * 180.02562 * 1 2 3 24 24 H 1.08999 * 109.47126 * 59.99702 * 1 2 3 25 25 H 1.09001 * 109.46887 * 299.99703 * 1 2 3 26 26 H 0.97003 * 119.99614 * 179.97438 * 7 6 4 27 27 H 0.96999 * 120.00466 * 270.00211 * 12 2 1 28 28 H 1.07997 * 119.99883 * 0.02562 * 14 13 12 29 29 H 1.08001 * 120.80688 * 359.97438 * 16 15 14 30 30 H 1.08007 * 120.26295 * 180.21753 * 17 16 15 31 31 H 0.96997 * 119.99825 * 185.31701 * 22 21 20 32 32 H 0.96998 * 119.99634 * 5.31967 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7105 1.2305 5 1 2.6533 -1.5886 1.1313 6 6 1.6993 -0.2394 2.4828 7 7 0.9436 0.8301 2.6034 8 14 2.3214 -1.1204 4.0079 9 1 3.8064 -1.1210 4.0081 10 1 1.8270 -0.4200 5.2204 11 1 1.8259 -2.5204 4.0077 12 7 2.0184 -0.6907 -1.1961 13 7 2.2518 0.0299 -2.3748 14 6 2.6840 -0.5819 -3.4346 15 6 2.9301 0.1762 -4.6742 16 6 3.5020 -0.4472 -5.7882 17 6 3.7091 0.3073 -6.9304 18 6 3.3578 1.6457 -6.9353 19 17 3.6243 2.5921 -8.3661 20 7 2.8235 2.2161 -5.8706 21 6 2.5999 1.5392 -4.7563 22 7 2.0369 2.1795 -3.6613 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3633 0.5138 0.8900 26 1 0.7090 1.1613 3.4845 27 1 2.1800 -1.6468 -1.1722 28 1 2.8632 -1.6465 -3.4080 29 1 3.7727 -1.4923 -5.7589 30 1 4.1454 -0.1442 -7.8093 31 1 1.9427 1.7075 -2.8191 32 1 1.7376 3.0989 -3.7383 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381627765.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:40:48 Heat of formation + Delta-G solvation = 75.310541 kcal Electronic energy + Delta-G solvation = -17241.224982 eV Core-core repulsion = 14263.696829 eV Total energy + Delta-G solvation = -2977.528154 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.079 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.14515 -37.01160 -36.45425 -34.64069 -34.02721 -32.54736 -30.99503 -29.28055 -27.24578 -25.34704 -23.69319 -22.94279 -20.87678 -20.48041 -17.75637 -17.48295 -16.86447 -15.81226 -15.52028 -14.99846 -14.83245 -14.58749 -14.30797 -13.54627 -13.16503 -12.88061 -12.61161 -12.31149 -12.06102 -11.56785 -11.30349 -11.12985 -10.99790 -10.78576 -10.47576 -10.36995 -10.31607 -9.96868 -9.55904 -9.43558 -9.15344 -8.62219 -7.96194 -6.82843 -6.24155 -4.33214 0.86731 1.48958 1.82854 2.79543 3.19148 3.24336 3.24935 3.47750 3.95931 3.99457 4.27691 4.73982 4.87959 5.08586 5.15202 5.27589 5.51044 5.71936 6.00755 6.09583 6.44677 6.59523 6.77853 6.85025 6.99633 7.42477 7.51210 7.62125 7.64953 7.73881 7.99969 8.13629 8.46213 8.73781 9.08960 9.34197 10.81613 Molecular weight = 268.08amu Principal moments of inertia in cm(-1) A = 0.048286 B = 0.003351 C = 0.003250 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 579.743955 B = 8354.029313 C = 8613.456693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.296 3.704 3 H 0.041 0.959 4 C -0.534 4.534 5 H 0.061 0.939 6 C 0.068 3.932 7 N -0.885 5.885 8 Si 0.904 3.096 9 H -0.276 1.276 10 H -0.285 1.285 11 H -0.276 1.276 12 N -0.619 5.619 13 N -0.223 5.223 14 C 0.020 3.980 15 C -0.134 4.134 16 C -0.014 4.014 17 C -0.222 4.222 18 C 0.224 3.776 19 Cl -0.047 7.047 20 N -0.550 5.550 21 C 0.443 3.557 22 N -0.828 5.828 23 H 0.028 0.972 24 H 0.012 0.988 25 H 0.091 0.909 26 H 0.266 0.734 27 H 0.374 0.626 28 H 0.112 0.888 29 H 0.144 0.856 30 H 0.139 0.861 31 H 0.428 0.572 32 H 0.394 0.606 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.742 -1.506 -15.898 16.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.194 3.806 3 H 0.059 0.941 4 C -0.573 4.573 5 H 0.079 0.921 6 C -0.135 4.135 7 N -0.523 5.523 8 Si 0.731 3.269 9 H -0.201 1.201 10 H -0.210 1.210 11 H -0.201 1.201 12 N -0.355 5.355 13 N -0.037 5.037 14 C -0.188 4.188 15 C -0.145 4.145 16 C -0.043 4.043 17 C -0.246 4.246 18 C 0.057 3.943 19 Cl -0.018 7.018 20 N -0.271 5.271 21 C 0.200 3.800 22 N -0.383 5.383 23 H 0.047 0.953 24 H 0.031 0.969 25 H 0.110 0.890 26 H 0.076 0.924 27 H 0.210 0.790 28 H 0.129 0.871 29 H 0.161 0.839 30 H 0.157 0.843 31 H 0.278 0.722 32 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 3.077 0.508 -15.176 15.494 hybrid contribution 0.602 -2.104 0.829 2.340 sum 3.680 -1.596 -14.348 14.898 Atomic orbital electron populations 1.22233 0.98855 0.99443 1.00616 1.18597 0.90208 0.93494 0.78317 0.94118 1.21165 1.32587 1.13478 0.90098 0.92130 1.24856 0.94715 0.94964 0.99012 1.69864 1.35778 1.22409 1.24214 0.86462 0.79215 0.79602 0.81579 1.20123 1.21024 1.20115 1.48998 1.72456 1.07928 1.06154 1.72439 1.07616 1.28598 0.95015 1.23216 1.07572 0.97128 0.90871 1.18756 1.08485 0.92363 0.94853 1.21263 0.93002 0.99775 0.90240 1.21253 1.09890 0.92762 1.00741 1.21173 0.96112 0.88824 0.88155 1.98382 1.94350 1.74361 1.34755 1.66303 1.21484 1.39634 0.99719 1.18241 0.88305 0.87415 0.86065 1.43729 1.64623 1.17178 1.12771 0.95321 0.96900 0.89011 0.92377 0.78952 0.87057 0.83853 0.84284 0.72231 0.77787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.53 9.29 37.16 0.35 -3.18 16 2 C 0.30 7.03 3.23 -69.08 -0.22 6.81 16 3 H 0.04 1.07 8.14 -51.93 -0.42 0.65 16 4 C -0.53 -13.67 8.74 -34.44 -0.30 -13.97 16 5 H 0.06 1.51 7.79 -52.49 -0.41 1.10 16 6 C 0.07 1.76 5.30 -17.82 -0.09 1.67 16 7 N -0.89 -23.76 11.32 55.43 0.63 -23.14 16 8 Si 0.90 20.11 29.54 -169.99 -5.02 15.09 16 9 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 10 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 11 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 12 N -0.62 -12.48 6.10 -5.88 -0.04 -12.51 16 13 N -0.22 -4.08 7.82 32.14 0.25 -3.83 16 14 C 0.02 0.31 10.76 -14.70 -0.16 0.15 16 15 C -0.13 -1.94 5.90 -104.72 -0.62 -2.56 16 16 C -0.01 -0.16 9.93 -38.89 -0.39 -0.55 16 17 C -0.22 -2.49 9.85 -39.45 -0.39 -2.87 16 18 C 0.22 3.02 7.27 -17.39 -0.13 2.89 16 19 Cl -0.05 -0.55 29.10 -51.86 -1.51 -2.06 16 20 N -0.55 -8.55 10.35 -9.24 -0.10 -8.65 16 21 C 0.44 7.01 7.77 -154.83 -1.20 5.81 16 22 N -0.83 -13.05 8.95 31.33 0.28 -12.77 16 23 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.01 0.26 8.14 -51.93 -0.42 -0.16 16 25 H 0.09 2.31 6.07 -51.93 -0.32 2.00 16 26 H 0.27 6.83 8.31 -40.82 -0.34 6.49 16 27 H 0.37 6.98 8.58 -182.59 -1.57 5.41 16 28 H 0.11 1.45 8.02 -52.49 -0.42 1.02 16 29 H 0.14 1.15 8.06 -52.49 -0.42 0.72 16 30 H 0.14 1.17 8.06 -52.48 -0.42 0.74 16 31 H 0.43 7.41 5.02 -51.62 -0.26 7.15 16 32 H 0.39 5.52 8.95 -40.82 -0.37 5.15 16 LS Contribution 295.83 15.07 4.46 4.46 Total: -1.00 -27.21 295.83 -8.78 -35.99 By element: Atomic # 1 Polarization: 17.81 SS G_CDS: -4.58 Total: 13.22 kcal Atomic # 6 Polarization: -2.65 SS G_CDS: -3.15 Total: -5.80 kcal Atomic # 7 Polarization: -61.93 SS G_CDS: 1.03 Total: -60.90 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.02 Total: 15.09 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.51 Total: -2.06 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -27.21 -8.78 -35.99 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381627765.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.304 kcal (2) G-P(sol) polarization free energy of solvation -27.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.993 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds