Wall clock time and date at job start Mon Mar 30 2020 04:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.32306 * 119.94972 * 2 1 4 4 C 1.32458 * 120.16132 * 179.97438 * 3 2 1 5 5 Cl 1.73600 * 119.97275 * 179.97438 * 4 3 2 6 6 N 1.32221 * 120.05511 * 359.97438 * 4 3 2 7 7 C 1.32980 * 119.89582 * 359.97438 * 6 4 3 8 8 N 1.37980 * 120.08016 * 180.02562 * 7 6 4 9 9 C 1.46500 * 120.00122 * 174.87352 * 8 7 6 10 10 C 1.50703 * 109.47404 * 89.99980 * 9 8 7 11 11 H 1.07998 * 119.99768 * 359.97438 * 10 9 8 12 12 C 1.37877 * 120.00117 * 180.02562 * 10 9 8 13 13 N 1.31514 * 119.99858 * 0.02562 * 12 10 9 14 14 Si 1.86801 * 119.99938 * 179.97438 * 12 10 9 15 15 H 1.48500 * 109.46594 * 90.00144 * 14 12 10 16 16 H 1.48498 * 109.46954 * 209.99874 * 14 12 10 17 17 H 1.48497 * 109.47205 * 330.00614 * 14 12 10 18 18 C 1.46497 * 120.00133 * 354.87432 * 8 7 6 19 19 C 1.53002 * 117.50071 * 193.67022 * 18 8 7 20 20 C 1.53001 * 117.50433 * 125.01165 * 18 8 7 21 21 N 1.32071 * 119.94741 * 179.97438 * 2 1 3 22 22 H 1.09006 * 109.46746 * 90.00700 * 1 2 3 23 23 H 1.09000 * 109.47131 * 210.00192 * 1 2 3 24 24 H 1.08998 * 109.47268 * 330.00486 * 1 2 3 25 25 H 1.09001 * 109.47489 * 210.00036 * 9 8 7 26 26 H 1.09002 * 109.46994 * 329.99662 * 9 8 7 27 27 H 0.97005 * 119.99774 * 180.02562 * 13 12 10 28 28 H 1.09001 * 115.55034 * 339.33731 * 18 8 7 29 29 H 1.08999 * 117.49826 * 359.97438 * 19 18 8 30 30 H 1.08999 * 117.49975 * 145.01392 * 19 18 8 31 31 H 1.08996 * 117.50002 * 214.97840 * 20 18 8 32 32 H 1.09004 * 117.49171 * 359.97438 * 20 18 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1675 1.1464 0.0000 4 6 3.4921 1.1513 0.0005 5 17 4.3538 2.6583 -0.0002 6 7 4.1585 0.0093 0.0015 7 6 3.4969 -1.1442 0.0026 8 7 4.1885 -2.3382 0.0042 9 6 3.4622 -3.6053 0.1187 10 6 3.1038 -4.1051 -1.2572 11 1 3.3882 -3.5355 -2.1296 12 6 2.4119 -5.2888 -1.4021 13 7 2.0643 -5.9816 -0.3396 14 14 1.9671 -5.9079 -3.1075 15 1 3.0601 -6.7721 -3.6209 16 1 0.7079 -6.6919 -3.0366 17 1 1.7798 -4.7518 -4.0205 18 6 5.6491 -2.3388 -0.1086 19 6 6.3330 -3.6711 -0.4220 20 6 6.4415 -3.0658 0.9797 21 7 2.1663 -1.1444 0.0005 22 1 -0.3633 -0.0001 -1.0277 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3634 0.8900 0.5137 25 1 4.0914 -4.3408 0.6199 26 1 2.5517 -3.4511 0.6979 27 1 1.5778 -6.8146 -0.4416 28 1 6.0883 -1.4357 -0.5325 29 1 5.6961 -4.5472 -0.5439 30 1 7.2221 -3.6445 -1.0519 31 1 7.4021 -2.6413 1.2715 32 1 5.8760 -3.5434 1.7799 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000694806819.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:37:45 Heat of formation + Delta-G solvation = 82.392724 kcal Electronic energy + Delta-G solvation = -18155.502754 eV Core-core repulsion = 15178.281707 eV Total energy + Delta-G solvation = -2977.221047 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.079 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.64755 -39.52810 -38.15691 -36.06035 -35.46194 -34.78380 -32.92960 -30.40129 -29.40117 -25.94264 -24.64797 -24.46168 -23.21159 -21.37975 -19.85410 -19.04522 -18.51367 -17.31166 -17.07061 -16.70057 -15.74945 -15.48569 -15.21450 -14.80675 -14.60622 -14.28554 -13.94776 -13.46860 -13.39358 -13.26246 -12.89247 -12.65170 -12.61224 -12.50434 -12.28172 -12.15582 -11.61065 -11.48646 -11.43350 -11.35188 -10.79877 -10.65430 -10.54407 -9.08584 -8.19763 -6.33781 -0.23502 -0.00972 0.11830 1.38257 1.39805 1.48918 1.61608 2.38343 2.62842 2.70961 3.04450 3.09448 3.14890 3.55938 3.87013 4.05570 4.13471 4.45811 4.66352 4.70281 4.77195 4.80798 4.99132 5.02119 5.19780 5.25103 5.32042 5.34571 5.53148 5.65677 6.00685 6.12085 6.32397 6.72246 7.24263 7.35739 8.85399 Molecular weight = 268.08amu Principal moments of inertia in cm(-1) A = 0.018225 B = 0.006702 C = 0.005406 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1536.008729 B = 4176.896857 C = 5178.127766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.398 3.602 3 N -0.602 5.602 4 C 0.432 3.568 5 Cl 0.052 6.948 6 N -0.611 5.611 7 C 0.601 3.399 8 N -0.522 5.522 9 C 0.275 3.725 10 C -0.526 4.526 11 H 0.043 0.957 12 C 0.022 3.978 13 N -0.921 5.921 14 Si 0.959 3.041 15 H -0.270 1.270 16 H -0.279 1.279 17 H -0.278 1.278 18 C 0.068 3.932 19 C -0.172 4.172 20 C -0.174 4.174 21 N -0.609 5.609 22 H 0.107 0.893 23 H 0.091 0.909 24 H 0.115 0.885 25 H 0.031 0.969 26 H 0.020 0.980 27 H 0.268 0.732 28 H 0.137 0.863 29 H 0.086 0.914 30 H 0.127 0.873 31 H 0.131 0.869 32 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.530 11.345 1.100 11.933 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.123 3.877 3 N -0.334 5.334 4 C 0.127 3.873 5 Cl 0.079 6.921 6 N -0.346 5.346 7 C 0.239 3.761 8 N -0.232 5.232 9 C 0.155 3.845 10 C -0.565 4.565 11 H 0.061 0.939 12 C -0.178 4.178 13 N -0.561 5.561 14 Si 0.784 3.216 15 H -0.195 1.195 16 H -0.204 1.204 17 H -0.203 1.203 18 C -0.037 4.037 19 C -0.210 4.210 20 C -0.213 4.213 21 N -0.339 5.339 22 H 0.125 0.875 23 H 0.110 0.890 24 H 0.134 0.866 25 H 0.049 0.951 26 H 0.038 0.962 27 H 0.077 0.923 28 H 0.155 0.845 29 H 0.104 0.896 30 H 0.145 0.855 31 H 0.149 0.851 32 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.633 11.018 1.166 11.660 hybrid contribution -0.177 -0.447 -0.743 0.885 sum 3.456 10.571 0.423 11.129 Atomic orbital electron populations 1.20787 0.81570 1.05645 1.05621 1.24299 0.99813 0.81063 0.82522 1.68485 1.07474 1.31612 1.25836 1.23204 0.87005 0.88840 0.88243 1.98415 1.74377 1.23637 1.95634 1.67972 1.41660 0.97273 1.27710 1.19397 0.85425 0.86015 0.85279 1.46410 1.05664 1.02470 1.68655 1.18976 0.90898 0.77875 0.96745 1.21380 1.36493 1.06297 0.92311 0.93889 1.25597 0.95193 0.96557 1.00467 1.70014 1.39876 1.15829 1.30364 0.85551 0.78081 0.78120 0.79845 1.19493 1.20384 1.20306 1.21803 0.77458 0.98651 1.05749 1.23410 1.02500 0.95966 0.99120 1.23436 1.02259 1.03347 0.92239 1.68741 1.07903 1.32199 1.25099 0.87492 0.88983 0.86632 0.95099 0.96167 0.92321 0.84506 0.89567 0.85534 0.85082 0.90185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.99 10.37 71.24 0.74 -1.25 16 2 C 0.40 14.43 7.69 138.51 1.07 15.50 16 3 N -0.60 -21.11 10.41 -182.94 -1.91 -23.02 16 4 C 0.43 15.27 8.25 180.56 1.49 16.76 16 5 Cl 0.05 1.39 29.30 -2.72 -0.08 1.31 16 6 N -0.61 -24.00 9.36 -193.10 -1.81 -25.81 16 7 C 0.60 26.45 8.17 261.23 2.14 28.58 16 8 N -0.52 -23.17 2.89 -690.61 -2.00 -25.16 16 9 C 0.28 13.99 4.40 85.63 0.38 14.37 16 10 C -0.53 -28.61 8.91 25.60 0.23 -28.38 16 11 H 0.04 2.42 7.81 -2.91 -0.02 2.40 16 12 C 0.02 1.18 5.46 84.65 0.46 1.64 16 13 N -0.92 -52.20 13.29 21.45 0.28 -51.92 16 14 Si 0.96 43.15 29.54 68.60 2.03 45.18 16 15 H -0.27 -11.64 7.11 99.48 0.71 -10.93 16 16 H -0.28 -12.20 7.11 99.48 0.71 -11.49 16 17 H -0.28 -12.56 7.11 99.48 0.71 -11.85 16 18 C 0.07 2.45 6.28 44.99 0.28 2.73 16 19 C -0.17 -5.67 9.73 30.62 0.30 -5.37 16 20 C -0.17 -5.25 10.02 30.62 0.31 -4.94 16 21 N -0.61 -26.81 9.25 -190.26 -1.76 -28.57 16 22 H 0.11 2.42 8.14 -2.38 -0.02 2.40 16 23 H 0.09 2.38 8.14 -2.39 -0.02 2.36 16 24 H 0.12 2.27 8.14 -2.39 -0.02 2.25 16 25 H 0.03 1.62 6.25 -2.39 -0.01 1.61 16 26 H 0.02 1.15 7.45 -2.39 -0.02 1.13 16 27 H 0.27 14.31 8.31 -92.70 -0.77 13.54 16 28 H 0.14 4.63 7.57 -2.39 -0.02 4.61 16 29 H 0.09 3.48 6.29 -2.39 -0.02 3.47 16 30 H 0.13 3.31 8.14 -2.39 -0.02 3.29 16 31 H 0.13 3.00 8.14 -2.39 -0.02 2.98 16 32 H 0.08 2.66 7.82 -2.38 -0.02 2.65 16 Total: -1.00 -63.24 296.87 3.29 -59.94 By element: Atomic # 1 Polarization: 7.26 SS G_CDS: 1.15 Total: 8.40 kcal Atomic # 6 Polarization: 32.26 SS G_CDS: 7.38 Total: 39.64 kcal Atomic # 7 Polarization: -147.29 SS G_CDS: -7.18 Total: -154.47 kcal Atomic # 14 Polarization: 43.15 SS G_CDS: 2.03 Total: 45.18 kcal Atomic # 17 Polarization: 1.39 SS G_CDS: -0.08 Total: 1.31 kcal Total: -63.24 3.29 -59.94 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000694806819.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.336 kcal (2) G-P(sol) polarization free energy of solvation -63.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -59.943 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds