Wall clock time and date at job start Mon Mar 30 2020 05:24:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.31929 * 119.01941 * 2 1 4 4 C 1.32140 * 121.05445 * 180.02562 * 3 2 1 5 5 C 1.38982 * 119.12647 * 359.74139 * 4 3 2 6 6 Cl 1.73603 * 120.88566 * 180.25493 * 5 4 3 7 7 C 1.39630 * 118.22971 * 0.51928 * 5 4 3 8 8 C 1.48367 * 120.56574 * 179.76270 * 7 5 4 9 9 O 1.21486 * 119.99759 * 353.82940 * 8 7 5 10 10 N 1.34775 * 119.99979 * 173.83262 * 8 7 5 11 11 C 1.46500 * 120.00291 * 3.07944 * 10 8 7 12 12 C 1.46506 * 120.00160 * 183.08240 * 10 8 7 13 13 C 1.50695 * 109.46934 * 89.99678 * 12 10 8 14 14 H 1.07998 * 120.00210 * 0.02562 * 13 12 10 15 15 C 1.37884 * 119.99922 * 180.02562 * 13 12 10 16 16 N 1.31508 * 119.99986 * 180.02562 * 15 13 12 17 17 Si 1.86803 * 119.99797 * 0.02562 * 15 13 12 18 18 H 1.48497 * 109.47324 * 89.99755 * 17 15 13 19 19 H 1.48501 * 109.46887 * 209.99978 * 17 15 13 20 20 H 1.48500 * 109.46900 * 329.99589 * 17 15 13 21 21 N 1.31522 * 119.01995 * 180.02562 * 2 1 3 22 22 H 1.09004 * 109.46446 * 269.97788 * 1 2 3 23 23 H 1.08998 * 109.46983 * 29.97586 * 1 2 3 24 24 H 1.09000 * 109.47296 * 149.98123 * 1 2 3 25 25 H 1.08005 * 120.43082 * 179.97438 * 4 3 2 26 26 H 1.09003 * 109.46860 * 83.90409 * 11 10 8 27 27 H 1.08997 * 109.47574 * 203.90194 * 11 10 8 28 28 H 1.09007 * 109.47174 * 323.90928 * 11 10 8 29 29 H 1.09000 * 109.47341 * 209.99702 * 12 10 8 30 30 H 1.08998 * 109.46443 * 330.00083 * 12 10 8 31 31 H 0.97006 * 119.99838 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1470 1.1537 0.0000 4 6 3.4675 1.2006 -0.0005 5 6 4.1867 0.0113 0.0044 6 17 5.9227 0.0197 0.0106 7 6 3.4758 -1.1904 -0.0014 8 6 4.1912 -2.4903 -0.0018 9 8 5.4009 -2.5177 -0.1102 10 7 3.4990 -3.6404 0.1180 11 6 2.0356 -3.6116 0.1807 12 6 4.2099 -4.9197 0.1855 13 6 4.5165 -5.2486 1.6238 14 1 4.2118 -4.5727 2.4091 15 6 5.1859 -6.4125 1.9373 16 7 5.4530 -6.6998 3.1925 17 14 5.7134 -7.5813 0.5789 18 1 7.0755 -7.2165 0.1131 19 1 5.7241 -8.9722 1.0991 20 1 4.7599 -7.4844 -0.5554 21 7 2.1450 -1.1501 -0.0005 22 1 -0.3632 -0.0004 1.0277 23 1 -0.3633 0.8902 -0.5135 24 1 -0.3634 -0.8898 -0.5141 25 1 3.9812 2.1507 -0.0009 26 1 1.6293 -3.5745 -0.8301 27 1 1.6757 -4.5089 0.6841 28 1 1.7129 -2.7299 0.7346 29 1 3.5864 -5.7049 -0.2418 30 1 5.1407 -4.8481 -0.3772 31 1 5.9237 -7.5189 3.4130 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000155341434.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:24:57 Heat of formation + Delta-G solvation = 37.429207 kcal Electronic energy + Delta-G solvation = -18240.762486 eV Core-core repulsion = 15163.873012 eV Total energy + Delta-G solvation = -3076.889474 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.41884 -38.86428 -36.66853 -35.12099 -34.06572 -33.09559 -32.43675 -28.63022 -28.51316 -26.42098 -25.14121 -23.51793 -22.07199 -19.52805 -18.16324 -17.00815 -16.96490 -16.22710 -15.79071 -15.36007 -14.93878 -14.52341 -14.04068 -13.66108 -13.18901 -13.02954 -12.63192 -12.38783 -12.34803 -12.23997 -11.81269 -11.61637 -11.32014 -11.16854 -11.08305 -10.68858 -10.53847 -10.17670 -9.77579 -9.52186 -9.21607 -8.79147 -8.61064 -7.73672 -6.10949 -4.10580 0.35025 0.60823 1.98944 3.01058 3.27451 3.31793 3.35443 3.38521 3.69007 3.76188 3.84997 4.37448 4.41355 4.57042 4.84990 5.16357 5.23378 5.33654 5.49021 5.58464 5.94682 5.99816 6.10530 6.45789 6.60686 6.66225 6.87477 7.25267 7.55883 7.71642 8.08713 8.41233 8.72103 8.92337 9.48265 11.02258 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.023731 B = 0.006051 C = 0.005183 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1179.592318 B = 4625.959796 C = 5400.935948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.306 3.694 3 N -0.500 5.500 4 C 0.163 3.837 5 C -0.112 4.112 6 Cl 0.001 6.999 7 C 0.159 3.841 8 C 0.549 3.451 9 O -0.507 6.507 10 N -0.567 5.567 11 C 0.075 3.925 12 C 0.214 3.786 13 C -0.531 4.531 14 H 0.075 0.925 15 C 0.074 3.926 16 N -0.896 5.896 17 Si 0.876 3.124 18 H -0.273 1.273 19 H -0.284 1.284 20 H -0.265 1.265 21 N -0.472 5.472 22 H 0.090 0.910 23 H 0.087 0.913 24 H 0.090 0.910 25 H 0.182 0.818 26 H 0.046 0.954 27 H 0.067 0.933 28 H 0.098 0.902 29 H 0.035 0.965 30 H 0.040 0.960 31 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.872 14.553 -7.961 18.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.040 3.960 3 N -0.215 5.215 4 C -0.005 4.005 5 C -0.144 4.144 6 Cl 0.030 6.970 7 C 0.011 3.989 8 C 0.331 3.669 9 O -0.381 6.381 10 N -0.297 5.297 11 C -0.068 4.068 12 C 0.093 3.907 13 C -0.570 4.570 14 H 0.093 0.907 15 C -0.129 4.129 16 N -0.534 5.534 17 Si 0.703 3.297 18 H -0.198 1.198 19 H -0.210 1.210 20 H -0.190 1.190 21 N -0.190 5.190 22 H 0.108 0.892 23 H 0.106 0.894 24 H 0.109 0.891 25 H 0.199 0.801 26 H 0.064 0.936 27 H 0.085 0.915 28 H 0.116 0.884 29 H 0.053 0.947 30 H 0.058 0.942 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -8.966 14.305 -7.901 18.640 hybrid contribution 1.362 -0.656 -0.423 1.570 sum -7.604 13.649 -8.324 17.703 Atomic orbital electron populations 1.20614 0.84846 1.04524 1.04311 1.23574 0.98753 0.83344 0.90375 1.68267 1.08944 1.30490 1.13842 1.23348 0.89237 0.97280 0.90648 1.22865 0.90062 0.95925 1.05576 1.98442 1.04085 1.98596 1.95915 1.22125 0.89392 0.95048 0.92359 1.17574 0.86654 0.82370 0.80259 1.90848 1.12201 1.85638 1.49424 1.47773 1.07474 1.06735 1.67725 1.22284 0.79389 1.03913 1.01219 1.19814 0.92915 0.79237 0.98688 1.21285 1.37845 1.06829 0.91005 0.90707 1.24841 0.95009 0.97555 0.95454 1.69893 1.40904 1.25474 1.17105 0.86850 0.79992 0.80411 0.82465 1.19806 1.20995 1.18996 1.69020 1.07610 1.28886 1.13472 0.89192 0.89409 0.89112 0.80119 0.93581 0.91465 0.88445 0.94686 0.94180 0.92485 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.69 10.31 36.00 0.37 -0.32 16 2 C 0.31 3.80 7.64 -157.31 -1.20 2.60 16 3 N -0.50 -6.19 10.31 -10.70 -0.11 -6.30 16 4 C 0.16 1.95 11.14 -17.14 -0.19 1.76 16 5 C -0.11 -1.69 6.40 -38.79 -0.25 -1.94 16 6 Cl 0.00 0.01 26.27 -51.86 -1.36 -1.35 16 7 C 0.16 2.77 6.67 -82.61 -0.55 2.22 16 8 C 0.55 11.71 7.66 -12.09 -0.09 11.62 16 9 O -0.51 -12.14 13.74 5.38 0.07 -12.07 16 10 N -0.57 -12.21 2.86 -183.88 -0.53 -12.74 16 11 C 0.08 1.28 9.41 59.85 0.56 1.85 16 12 C 0.21 5.26 4.22 -5.19 -0.02 5.23 16 13 C -0.53 -15.30 9.94 -34.44 -0.34 -15.64 16 14 H 0.07 2.37 8.06 -52.49 -0.42 1.95 16 15 C 0.07 2.16 5.47 -17.82 -0.10 2.06 16 16 N -0.90 -27.58 13.96 55.43 0.77 -26.80 16 17 Si 0.88 21.46 27.47 -169.99 -4.67 16.79 16 18 H -0.27 -6.70 7.11 56.52 0.40 -6.30 16 19 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 20 H -0.27 -6.11 6.54 56.52 0.37 -5.74 16 21 N -0.47 -7.05 6.08 -7.31 -0.04 -7.10 16 22 H 0.09 0.64 8.14 -51.93 -0.42 0.21 16 23 H 0.09 0.59 8.14 -51.93 -0.42 0.16 16 24 H 0.09 0.65 8.14 -51.93 -0.42 0.23 16 25 H 0.18 1.49 8.06 -52.48 -0.42 1.07 16 26 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 27 H 0.07 1.15 8.03 -51.93 -0.42 0.73 16 28 H 0.10 1.57 5.15 -52.50 -0.27 1.30 16 29 H 0.04 0.82 7.13 -51.93 -0.37 0.45 16 30 H 0.04 1.04 6.81 -51.93 -0.35 0.68 16 31 H 0.27 7.61 8.31 -40.82 -0.34 7.27 16 LS Contribution 284.41 15.07 4.29 4.29 Total: -1.00 -33.48 284.41 -6.50 -39.99 By element: Atomic # 1 Polarization: -1.03 SS G_CDS: -3.11 Total: -4.14 kcal Atomic # 6 Polarization: 11.26 SS G_CDS: -1.81 Total: 9.44 kcal Atomic # 7 Polarization: -53.04 SS G_CDS: 0.09 Total: -52.94 kcal Atomic # 8 Polarization: -12.14 SS G_CDS: 0.07 Total: -12.07 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -4.67 Total: 16.79 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.36 Total: -1.35 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -33.48 -6.50 -39.99 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000155341434.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.414 kcal (2) G-P(sol) polarization free energy of solvation -33.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.932 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds