Wall clock time and date at job start Mon Mar 30 2020 05:28:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53004 * 109.47210 * 2 1 4 4 N 1.46502 * 109.47048 * 120.00294 * 2 1 3 5 5 C 1.36797 * 119.99993 * 330.41201 * 4 2 1 6 6 H 1.08001 * 120.00261 * 311.81195 * 5 4 2 7 7 C 1.39095 * 119.99986 * 131.80428 * 5 4 2 8 8 N 1.31328 * 120.00245 * 168.50183 * 7 5 4 9 9 Si 1.86802 * 119.99780 * 348.50343 * 7 5 4 10 10 H 1.48499 * 109.47143 * 95.13865 * 9 7 5 11 11 H 1.48506 * 109.47155 * 215.13292 * 9 7 5 12 12 H 1.48500 * 109.47484 * 335.13719 * 9 7 5 13 13 C 1.34775 * 119.99827 * 150.41551 * 4 2 1 14 14 O 1.21568 * 119.99849 * 187.41297 * 13 4 2 15 15 C 1.47941 * 120.00410 * 7.41765 * 13 4 2 16 16 C 1.39873 * 120.17653 * 187.75356 * 15 13 4 17 17 C 1.38673 * 117.91211 * 179.97438 * 16 15 13 18 18 C 1.38806 * 118.06926 * 0.02562 * 17 16 15 19 19 Cl 1.73601 * 119.97416 * 180.02562 * 18 17 16 20 20 N 1.32285 * 120.05240 * 359.97438 * 18 17 16 21 21 N 1.28352 * 122.28262 * 0.02562 * 20 18 17 22 22 H 1.09001 * 109.47201 * 305.32754 * 1 2 3 23 23 H 1.09000 * 109.47061 * 65.32964 * 1 2 3 24 24 H 1.09000 * 109.47217 * 185.32508 * 1 2 3 25 25 H 1.09000 * 109.47070 * 240.00413 * 2 1 3 26 26 H 1.08998 * 109.47109 * 180.80254 * 3 2 1 27 27 H 1.09001 * 109.46810 * 300.80636 * 3 2 1 28 28 H 1.09001 * 109.46631 * 60.80646 * 3 2 1 29 29 H 0.97003 * 119.99933 * 180.02562 * 8 7 5 30 30 H 1.07999 * 121.04522 * 359.95139 * 16 15 13 31 31 H 1.08000 * 120.97147 * 179.72408 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0183 -0.6907 1.1962 5 6 1.2750 -0.6783 2.3445 6 1 0.8704 0.2517 2.7159 7 6 1.0400 -1.8634 3.0337 8 7 0.5269 -1.8297 4.2421 9 14 1.4544 -3.5031 2.2404 10 1 2.8065 -3.9359 2.6756 11 1 0.4529 -4.5194 2.6522 12 1 1.4330 -3.3575 0.7627 13 6 3.1999 -1.3382 1.1652 14 8 3.5429 -2.0225 2.1096 15 6 4.0795 -1.2163 -0.0181 16 6 5.2264 -2.0096 -0.1263 17 6 6.0170 -1.8572 -1.2554 18 6 5.6230 -0.9276 -2.2079 19 17 6.5757 -0.6970 -3.6407 20 7 4.5216 -0.2180 -2.0253 21 7 3.7842 -0.3527 -0.9834 22 1 -0.3634 0.5942 0.8384 23 1 -0.3633 0.4289 -0.9339 24 1 -0.3634 -1.0232 0.0954 25 1 1.8933 -0.5138 -0.8900 26 1 3.1299 1.4425 -0.0144 27 1 1.6649 1.9605 -0.8827 28 1 1.6885 1.9521 0.8972 29 1 0.3634 -2.6562 4.7229 30 1 5.4883 -2.7183 0.6454 31 1 6.9158 -2.4412 -1.3875 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000232651997.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 05:28:07 Heat of formation + Delta-G solvation = 46.941381 kcal Electronic energy + Delta-G solvation = -18888.007824 eV Core-core repulsion = 15811.530829 eV Total energy + Delta-G solvation = -3076.476995 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.08666 -38.92013 -36.94128 -35.84009 -33.13877 -32.87314 -31.95653 -30.55553 -26.76136 -25.89190 -24.68504 -23.88020 -21.33482 -19.86779 -18.41452 -17.27377 -17.15690 -16.13767 -15.50965 -15.05773 -14.44500 -14.33081 -13.84507 -13.57174 -13.47984 -12.80224 -12.50791 -12.37169 -12.20484 -11.72754 -11.57098 -11.52440 -11.16868 -10.89520 -10.55555 -10.41541 -10.37507 -10.08190 -9.93869 -9.55942 -9.41813 -8.92438 -8.62677 -7.71765 -6.37461 -4.17072 0.46436 0.73560 1.52278 2.95531 3.36740 3.42194 3.57199 3.91117 4.07683 4.22204 4.44997 4.47259 4.73642 4.80221 4.98707 5.13679 5.61293 5.69086 5.76734 5.91930 6.01116 6.12057 6.28786 6.49768 6.56716 6.63573 6.98553 7.02933 7.63729 7.83465 8.47913 8.56854 8.66914 9.17246 9.55657 10.64130 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.027548 B = 0.006872 C = 0.005918 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1016.172677 B = 4073.262952 C = 4730.345040 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.123 3.877 3 C -0.141 4.141 4 N -0.416 5.416 5 C -0.325 4.325 6 H 0.105 0.895 7 C 0.084 3.916 8 N -0.854 5.854 9 Si 0.933 3.067 10 H -0.254 1.254 11 H -0.311 1.311 12 H -0.286 1.286 13 C 0.475 3.525 14 O -0.544 6.544 15 C 0.049 3.951 16 C -0.063 4.063 17 C -0.114 4.114 18 C 0.106 3.894 19 Cl -0.019 7.019 20 N -0.237 5.237 21 N -0.193 5.193 22 H 0.067 0.933 23 H 0.050 0.950 24 H 0.055 0.945 25 H 0.087 0.913 26 H 0.057 0.943 27 H 0.054 0.946 28 H 0.050 0.950 29 H 0.277 0.723 30 H 0.167 0.833 31 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.196 0.551 -12.484 14.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C 0.019 3.981 3 C -0.199 4.199 4 N -0.134 5.134 5 C -0.452 4.452 6 H 0.122 0.878 7 C -0.127 4.127 8 N -0.487 5.487 9 Si 0.766 3.234 10 H -0.181 1.181 11 H -0.242 1.242 12 H -0.212 1.212 13 C 0.264 3.736 14 O -0.429 6.429 15 C -0.096 4.096 16 C -0.093 4.093 17 C -0.144 4.144 18 C -0.065 4.065 19 Cl 0.009 6.991 20 N -0.082 5.082 21 N -0.040 5.040 22 H 0.086 0.914 23 H 0.069 0.931 24 H 0.074 0.926 25 H 0.105 0.895 26 H 0.076 0.924 27 H 0.073 0.927 28 H 0.069 0.931 29 H 0.087 0.913 30 H 0.185 0.815 31 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 7.310 1.342 -12.521 14.561 hybrid contribution 1.292 -1.809 0.002 2.223 sum 8.602 -0.467 -12.519 15.197 Atomic orbital electron populations 1.21902 0.94571 1.02493 1.00923 1.21568 0.94395 0.93946 0.88187 1.21996 1.01485 0.95733 1.00729 1.43831 1.14584 1.43938 1.11078 1.18950 1.31377 0.96228 0.98607 0.87779 1.25549 0.92435 1.00156 0.94552 1.69658 1.39366 1.29636 1.10066 0.85875 0.77852 0.80959 0.78751 1.18069 1.24168 1.21212 1.17617 0.82069 0.88127 0.85763 1.90566 1.73600 1.42245 1.36459 1.23566 0.96264 0.93797 0.95941 1.22486 0.92309 0.97374 0.97106 1.22119 1.01418 0.97877 0.92939 1.23518 0.94923 0.96843 0.91258 1.98400 1.68178 1.96374 1.36167 1.73044 1.01588 1.18699 1.14845 1.73999 1.19207 1.14294 0.96536 0.91426 0.93109 0.92587 0.89516 0.92418 0.92665 0.93060 0.91310 0.81515 0.82277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.59 8.42 37.16 0.31 -2.27 16 2 C 0.12 2.44 2.57 -67.93 -0.17 2.26 16 3 C -0.14 -2.52 8.90 37.16 0.33 -2.19 16 4 N -0.42 -9.95 2.06 -108.77 -0.22 -10.17 16 5 C -0.32 -8.72 8.15 -15.02 -0.12 -8.84 16 6 H 0.10 2.91 7.88 -52.49 -0.41 2.50 16 7 C 0.08 2.36 5.06 -17.45 -0.09 2.27 16 8 N -0.85 -24.76 13.95 55.50 0.77 -23.99 16 9 Si 0.93 24.07 24.44 -169.99 -4.15 19.92 16 10 H -0.25 -6.77 6.34 56.52 0.36 -6.41 16 11 H -0.31 -7.84 7.11 56.52 0.40 -7.44 16 12 H -0.29 -7.24 7.03 56.52 0.40 -6.84 16 13 C 0.48 11.31 6.01 -12.29 -0.07 11.23 16 14 O -0.54 -14.40 11.47 5.31 0.06 -14.34 16 15 C 0.05 0.96 6.59 -82.84 -0.55 0.41 16 16 C -0.06 -0.99 9.73 -38.81 -0.38 -1.37 16 17 C -0.11 -1.44 9.99 -39.21 -0.39 -1.83 16 18 C 0.11 1.48 7.37 -17.15 -0.13 1.35 16 19 Cl -0.02 -0.22 29.13 -51.86 -1.51 -1.73 16 20 N -0.24 -3.96 11.50 32.93 0.38 -3.58 16 21 N -0.19 -3.56 5.39 33.31 0.18 -3.38 16 22 H 0.07 1.28 7.48 -51.93 -0.39 0.89 16 23 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 24 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 25 H 0.09 1.71 5.59 -51.93 -0.29 1.42 16 26 H 0.06 1.07 6.39 -51.93 -0.33 0.74 16 27 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 28 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 29 H 0.28 7.54 8.31 -40.82 -0.34 7.20 16 30 H 0.17 2.44 7.74 -52.49 -0.41 2.04 16 31 H 0.16 1.36 8.06 -52.49 -0.42 0.94 16 LS Contribution 275.19 15.07 4.15 4.15 Total: -1.00 -30.39 275.19 -4.73 -35.12 By element: Atomic # 1 Polarization: 0.10 SS G_CDS: -3.13 Total: -3.03 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -1.26 Total: 1.04 kcal Atomic # 7 Polarization: -42.23 SS G_CDS: 1.11 Total: -41.12 kcal Atomic # 8 Polarization: -14.40 SS G_CDS: 0.06 Total: -14.34 kcal Atomic # 14 Polarization: 24.07 SS G_CDS: -4.15 Total: 19.92 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -1.51 Total: -1.73 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.39 -4.73 -35.12 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000232651997.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.062 kcal (2) G-P(sol) polarization free energy of solvation -30.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.673 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.120 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds